Basic Information

Gene Symbol
pita
Assembly
GCA_958496255.1
Location
OY292450.1:5869352-5881921[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00042 0.43 11.4 1.7 4 45 293 350 292 351 0.81
2 4 0.009 9.3 7.1 1.9 3 44 431 488 429 490 0.88
3 4 0.0032 3.2 8.6 2.8 4 44 572 628 570 630 0.77
4 4 6e-07 0.00061 20.5 2.1 3 44 703 757 701 759 0.84

Sequence Information

Coding Sequence
ATGGAAAGAAGACGAAGTCGTCCGCCTGATGCAGAGGCAAAAGCAGACCATGATACAACTAAAAGGATCTGTAGATGTTGCCTTACAACAGAGAAACTTTTGAAAAACGCTCTGGATGTGCAAGAATATTTTATGGAATTAGCTGGAATAAACGTATCTGTCTCCGATGGCATGCCTCCGTGGGTCTGTGTGGAGTGCAGTGCGCTGATGAAGAAAGGAATCACCTTTAAATACAAGATGATTAGAGCCCAGAGTGTACTTTATGATTACCTTATGAAATGTGCTCCGGGTCAGTTTGATGTGAATGATCCCGAGCTGACGAGGTTCCGGGCTCCAAACCTTAGCACTACACGCACACTTGCATTCGACAGCGTGAGGGAACGATATGGGTTCCATGACATACTACAGCAAGAGAAGCAGTTGTCTAAGACAGATCTGTTCTCTGTGCCGCTGCTGCCGATGTTTGAGAACCCTTGCAGCGCGCTCGAGAGCGTCGAGGCCGCCTTCTCAGACCTAGAAGATGATCCGCTAGAAAGGAACCAAACCGAGAAGAAAGTCATTGAAGATGACGACAATGACAACGATAACGACAATGACGACAATGAAGACAAAGACGACACTGAAGATAACGACAAAGACAATGACAATGACGACAACGTTGACGAGGACGACCTGATCGACGACGAGGACGACGATGAGGATATGGAGGATTTCGAGGAGGAGGAAGATGAGATGGAGGAGATGAGCAGTGACACTGAAGAGGATAGCGACAGCGAGCCATTGGTGAAGAAGAAagggaagaagaagaagaagaaggatatCAAGATGGAGAAGATAAGCGCCGAAGAGGAGCTAATGCAGCCTCCAGAGATAACGTGGACCAGCGAGAACGATGAGATACTCATAGAGTTTGTGAAGAGGAACGAAGCGCTCTACAATCCCAAGAGTAAGACCTACAAGATCGGAGTGTTGAAGAAGAAACTTTGGATTGATATTGGGACGATACTTAACAAATCAGACGTAGAATGCTGTAAGCGTTGGAACTACGTCCGCGACTACTACATCCGTCGTCGCGGCAAGCGCGCGTCGGGCGGCgaggcggcgcggcggcgggccGCGCTACTGGCCTTCCTGGACCACGTGCCGTCCACGGCCCGCGCCGGCTGGCCCCGGGACCCGCCCGAGCCCAGCCAGCAGCCGGAGCCCGTTAAGGAAGAGAGCACGACCAACTTTGAACATCTTTGGGAGCAGATCCGCATCGGTGACCAATTCTCGAAGATGTCCGGCGTAGCGTGGACGAGCGCTAAGGAGGAGTTGCTGATAGACTTCGTGCGGCGACACGACGCGCTATACAACCCTCGCAGCAAGGACTTCAGGAAACCGCAGGTCAAGCAGAAGCTGTGGTGCGATATAGGAACACTGCTTAATAAATCCGACACGGACTGTTCAAAGCGTTGGTGTTACGTCCGCGACTACTACACCCGTCGTAAGTCCAACCCGGGTGCATTGTCGACCGGCAAGGCGGCCAAGCGTCGCGCCGAACTACTGGCCTTCTTAGACTATGTGCCGCCGCCGGGCCGAGCGCCTCTCTCGCCATTACCGCctCAAGAAAGCCTCATGAAGGAAGAGATGGAATCCACGCGGTTCGACAACTCTGCACATTCCAGCGATTATCGTGGCACAACCTACAGTAAAATGTCGTCCAACGCGACCTGGACGAGCGACAACGACGAGCGACTGATCGCTTTCGTGCGGCGGAACGAGTCGCTCTTTAATGCTAAGAGTAAGGACTTTCGGAAGGCGAGGATGAAACAGCGACTGTGGCGGGAGATCGGCTCTATACTCAAGAAATCAGATTCAGATTGCTACAAGCGTTGGTGTTACGTGCGCGACTACTACATCCGTCGCCGCGGCAAGCCCGGGGTTCTCTCCACGGGGAAGGCGGCCAGGCGACGAGCTGAGTTACTATCCTTCTTGGACGATGTACCAGCGGCCGCTAGGAGTGCACAGGAAGCGTTGAAAGCCGAGCGTCGCGAATCTGAAACACTAGAGGGAGCCATCTCCGATTTATTCCGTGAACAATACAGCAAGATGACGTCAAACGTGACGTGGACGTGGGAGAACGATGAGAAACTGATAAAGTTCGTGCGACGCAACGAACCGCTCTACAACCCCAAGTCGCGCAACACACAGCTCAAACAGAAGCTCTGGAACGAGATAGCGGCGCAACTCAACAAGACAGACGCGGATTGTTGCAAGCGTTGGTGTTACGTCCGCGACTACTACAGACGCCGCAGTAAGTTCGCGCCCTGCGGGGAGTCTGCTCGGCGACGCGCACAACTGCTGGCTTTCTTGGACAGAGTGCCATCTGTACCGAGGGGCTCTGGGACCGCTGATATATAA
Protein Sequence
MERRRSRPPDAEAKADHDTTKRICRCCLTTEKLLKNALDVQEYFMELAGINVSVSDGMPPWVCVECSALMKKGITFKYKMIRAQSVLYDYLMKCAPGQFDVNDPELTRFRAPNLSTTRTLAFDSVRERYGFHDILQQEKQLSKTDLFSVPLLPMFENPCSALESVEAAFSDLEDDPLERNQTEKKVIEDDDNDNDNDNDDNEDKDDTEDNDKDNDNDDNVDEDDLIDDEDDDEDMEDFEEEEDEMEEMSSDTEEDSDSEPLVKKKGKKKKKKDIKMEKISAEEELMQPPEITWTSENDEILIEFVKRNEALYNPKSKTYKIGVLKKKLWIDIGTILNKSDVECCKRWNYVRDYYIRRRGKRASGGEAARRRAALLAFLDHVPSTARAGWPRDPPEPSQQPEPVKEESTTNFEHLWEQIRIGDQFSKMSGVAWTSAKEELLIDFVRRHDALYNPRSKDFRKPQVKQKLWCDIGTLLNKSDTDCSKRWCYVRDYYTRRKSNPGALSTGKAAKRRAELLAFLDYVPPPGRAPLSPLPPQESLMKEEMESTRFDNSAHSSDYRGTTYSKMSSNATWTSDNDERLIAFVRRNESLFNAKSKDFRKARMKQRLWREIGSILKKSDSDCYKRWCYVRDYYIRRRGKPGVLSTGKAARRRAELLSFLDDVPAAARSAQEALKAERRESETLEGAISDLFREQYSKMTSNVTWTWENDEKLIKFVRRNEPLYNPKSRNTQLKQKLWNEIAAQLNKTDADCCKRWCYVRDYYRRRSKFAPCGESARRRAQLLAFLDRVPSVPRGSGTADI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00662188;
90% Identity
-
80% Identity
-