Enis007679.2
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- sip1
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000027.1:6675995-6693571[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-14 1.4e-10 41.7 0.0 10 102 371 450 362 462 0.87 2 3 2.1e-09 2.7e-05 24.4 1.2 46 144 511 597 505 599 0.93 3 3 2.8e-46 3.5e-42 145.4 8.5 30 275 583 810 580 810 0.95
Sequence Information
- Coding Sequence
- ATGTCAGACGACGAGGTGATACGCTTCGAGATCACTGATTATGATTTGGACAACGAATTCAACATAAACAGGAGAGGGAGAGCCAAGAAAGAACACCAAATATATGGTGTCTGGGCAAAAGACAGTGATGAAGATGACAATGAAGACAATGTGCGGCAAAGGAGTCGTAAGCAGAAGGATTATGCGGCACCCATTGGCTTTGTGGCGGGTGGAGTGCAGCAGGCGGGGAAGAAGAAGGTGCCCAAGCAAGAGCTAGAACCAGCCGAATCATCATCCCGGCCACAGATAGTAGACAGCTCGGATGAGGAGCCAACAGTTGTGCCGGACGAGTCGGAGACCGCGGGCATCCGGCGGCAGGGCCAGGGCATGCGCTCCGCCAACCTCGGCGGGAGCATGGGCACGTGGGAGAAGCACACCAAGGGGATCGGGGCCAAGCTGCTCTTACAAATGGGCTACCAACCGGGACGCGGTCTGGGTAAAGACCTGCAGGGTATATCGGCGCCCGTCGAAGCGACGTTGAGAAAAGGAAGGGGCGCTATTGGTGCCTATGGTCCTGAGAAAGCAGCTCAAAAAGCCAAGAGAGACGAGGAGCGTCGTCTGAAAGAGAAGGAAGATGAGAAGGCCCCGGAGAAGTCGTACCACTGGAAGAAGTCACACAAGGGCCGCTACTTCTACCGCGACTCGGCCGACGTCATACAAGAGGGTAAACCTACCATGCACACTATCAGCAGTAGCGAGCTGTCTCGCGTGCCAGTGATCGACATGACGGGCAAAGAGAAGCGAGTGCTAAGCGGGTACCACGCGCTTCGAGCGGTAGCGCCGCGCTTCGAACATGAGCCGCGACGGAAATGTACCAACTTCTCGGCGCCACAGCTAGTCCACAACTTGGAGGTGATGGTCGAGTGTTGCGAGCAGGATATAATCCAAAACGCCCGCGAGCTCCAACAAGCCGAGGACGAGATAGTAGTTCTCGAGCGAGACCTGAAGGAGTGCGACGAGAAACTCAAAGAGCAGGACGAGATCGTAGACAAAGTGCGCGACATCCGCGAGAGAGTGGCGCGGCTGAGCGAGTCGGACCTCTCGCTCGAGACCGCGTACGAGGTCGTCTGGGATCTGAAGGAATCCCACCCGCTCGAATACGAGATGTTCGGCATCGGCGCGATTGCGGGCAACATCGTGAGCCCGCTATTCAGCGCGCTCATGGCCAAGTGGGACCCCCTCCAGGCGCCCGCGGAGCCCGTGCCGGTGTTCCAGAAGTGGCGCGCGCTGCTCAGCGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACTACGCGCCCGCGCTCAAGGCTGCCGCCGCAAGTGGCGCGCGCTGCTCAGCGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACTACGCGCCCGCGCTCAAGGCTGCCGCCGCAAGTGGCGCGCGCTGCTCAGCGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACTACGCGCCCGCGCTCAAGGCTGCCGCCGCGTGAGTGTTACTAGACTAGCCTGGTACCTCCAGGCGCCCGCGGAGCCCGTGCCGGTGTTCCAGAAGTGGCGCGCGCTGCTCAGCGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACTACGCGCCCGCGCTCAAGGCTGCCGCCGCACTAGCCTGGTACCTCCAGGCGCCCGCGGAGCCCGTGCCGGTGTTCCAGAAGTGGCGCGCGCTGCTCAGCGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACTACGCGCCCGCGCTCAAGGCTGCCGCCGCACTAGCCTGGTACCTCCAGGCGCCCGCGGAGCCCGTGCCGGTGTTCCAGAAGTGGCGCGCGCTGCTCAGCGAGGAGGCTTACAACAGCCTGCTGTGGCAGCACTACGCGCCCGCGCTCAAGGCTGCCGCCGCTGTATGGAACCCTCGCGTCCCCGAGGCCATGCTGGCTTCTTTAACGGAATGGTCGTCGGCGTGCCCGCCGTGGCTGTCGGCGTCCGTGGCGGCCAACATCGTGGCGCCAAAACTGTTGGAGGCGGTGCGTGGCTGGGACCCTACGCACGACACGCAACCGTTACACCATTGGGTTCTGCCGTGGCATCCTCTAGCTGGCTCAGCGCTATCAACCGCAGTGTACCCGCTCATCCGCTCCCGGCTAGCGGCAGCGCTGGCGGCCTGGCACCCGGCGGACGGCTCGGCGCGGCCGCTGCTGGCGGCCTGGCGGACCGCCTGGGGCGCCGCGCTCACCGCCATGCTGCACCAGCACATCGTGCCCAAGCTGGAGCACTGTCTACAGACCGCGCCCGTGCACCTCGTGGGCAGGGAGAACACGGCGTGGCTGTGGTGCGTGGACTGGCTGGAGCTGCTGGGCGCGCCCACGCTGGGCGCGGTGGCGGCGCGCGCGCTGCTGCCGCGCTGGCTGGCCGCGCTGGCCGCCTGGCTCAACGCCGCGCCGCCGCACGCCAGCGTGCTCAACAGCTACACCATGTTCAAGAAAATCTTCCCGGACTCGGTCCTGAAGGAGCCCGGCGTGCGCGACGCGTTCCGCAAGGCCCTGGACATGATGAACCGCAGCGCCGACATCGACGGCGTGGAGCCGCCGCCGCCGCCGCGCTTCACCGCGCTCACCGCCGACAAGGACACCTCGAAGATCGCCGATGTACTCGCTTCCACTACGCAGCAGAAGAGCTTCTCGGAGTTGCTCGAGTCACGGTGTATAGAGCGAGGTATCACCTTCGTGCCCCTGCCGGGCAAGACGCGGGAGGGGCGGCCGCTGTACAAGATCGGCAGCGGCATGCAGTGCTACGTCATCCGGAACGTCATCATGTACTCCGGGGACGGCGGGAGGACCTTCGAGCCGGTCGGCCTGGACCGGCTGCTGGGCCTGGCCGACGAGTGA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNINRRGRAKKEHQIYGVWAKDSDEDDNEDNVRQRSRKQKDYAAPIGFVAGGVQQAGKKKVPKQELEPAESSSRPQIVDSSDEEPTVVPDESETAGIRRQGQGMRSANLGGSMGTWEKHTKGIGAKLLLQMGYQPGRGLGKDLQGISAPVEATLRKGRGAIGAYGPEKAAQKAKRDEERRLKEKEDEKAPEKSYHWKKSHKGRYFYRDSADVIQEGKPTMHTISSSELSRVPVIDMTGKEKRVLSGYHALRAVAPRFEHEPRRKCTNFSAPQLVHNLEVMVECCEQDIIQNARELQQAEDEIVVLERDLKECDEKLKEQDEIVDKVRDIRERVARLSESDLSLETAYEVVWDLKESHPLEYEMFGIGAIAGNIVSPLFSALMAKWDPLQAPAEPVPVFQKWRALLSEEAYNSLLWQHYAPALKAAAASGARCSARRPTTACCGSTTRPRSRLPPQVARAAQRGGLQQPAVAALRARAQGCRRVSVTRLAWYLQAPAEPVPVFQKWRALLSEEAYNSLLWQHYAPALKAAAALAWYLQAPAEPVPVFQKWRALLSEEAYNSLLWQHYAPALKAAAALAWYLQAPAEPVPVFQKWRALLSEEAYNSLLWQHYAPALKAAAAVWNPRVPEAMLASLTEWSSACPPWLSASVAANIVAPKLLEAVRGWDPTHDTQPLHHWVLPWHPLAGSALSTAVYPLIRSRLAAALAAWHPADGSARPLLAAWRTAWGAALTAMLHQHIVPKLEHCLQTAPVHLVGRENTAWLWCVDWLELLGAPTLGAVAARALLPRWLAALAAWLNAAPPHASVLNSYTMFKKIFPDSVLKEPGVRDAFRKALDMMNRSADIDGVEPPPPPRFTALTADKDTSKIADVLASTTQQKSFSELLESRCIERGITFVPLPGKTREGRPLYKIGSGMQCYVIRNVIMYSGDGGRTFEPVGLDRLLGLADE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00289628;
- 90% Identity
- -
- 80% Identity
- -