Ccan006656.4
Basic Information
- Insect
- Cenopis cana
- Gene Symbol
- sip1
- Assembly
- GCA_951800055.1
- Location
- OX637472.1:3347585-3368792[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-14 1.2e-10 42.6 0.0 8 99 369 447 362 458 0.88 2 4 3.9e-07 0.0032 18.3 0.1 41 107 463 516 459 520 0.88 3 4 8.1e-07 0.0065 17.2 0.1 41 99 519 564 516 575 0.85 4 4 2.9e-50 2.4e-46 159.7 5.6 41 275 580 796 576 796 0.96
Sequence Information
- Coding Sequence
- ATGTCAGACGACGAGGTGATACGCTTCGAGATCACAGATTATGATTTGGACAACGAGTTCAATCCAAACAGAAGAGGGAGAGCCAAGAAGGAACAACAAATTTATGGTGTGTGGGCGAAAGACAGTGATGAGGACGACAATGAGGACAACGTTCGACAGAGGACCCGCAAGCAAAAAGATTATGCGGCGCCAATTGGGTTTGTGGCGGGTGGAGTGCAGCAGGCGGGGAAAAAGAAGGAACCTAAACAAGAGCTGGAACCATCCGAGAAACCATCCCGGCCACAAATAGTGGACAGCTCGGACGAGGAGCCAACAGTAGTGCCGGACGAGTCGGAGACGGCGGGCATCCGGCGGCAGGGGCAGGGCATGCGCTCGGCCAACCTCGGCGGGAGCATGGGCACGTGGGAGAAGCACACTAAGGGCATAGGGGCCAAGCTGCTCTTGCAGATGGGTTACCAACCTGGCCGCGGTCTGGGCAAGGACCTGCAGGGTATATCGGCGCCCGTTGAAGCCACAGTCAGGAAGGGAAGGGGCGCCATTGGCGCGTACGGTCCCGAGAAAGCCGCTCAAAAAGCGAAGAGAGAGGAGGAGCGTCGTCTGAAAGAGAAGGAAGACGAGAAAGGTCCGGAGAAGTCGTACCACTGGAAGAAGTCGCACAAGGGCCGCTACTTCTACCGCGACGCGGCTGACGTCATACAAGAGGGTAAACCTACCATGCACACTATCAGCAGTAGCGAGTTATCTCGCGTGCCGGTGATCGACATGACGGGCAAGGAGAAGCGAGTGCTGAGCGGGTACCACGCGCTGCGCGCGGTCGCTCCACGCTTCGAGCACGAGCCGAGACGGAAATGTACCAACTTCTCGGCGCCGCAGCTGGTACATAACCTGGAGGTGATGGTCGAGTGCTGTGAACAGGATATAATCCAAAACGCGCGCGAGCTCCAACAGGCAGAGGACGAGATAGTCGTTCTCGAGCGAGACCTGAATGAGTGCGACGAGAAACTCAAGGAGCAGGACGAGATCATAGACAAAGTGCGCGACATCCGCGAGAGGGTGGCGAGGCTGAGCGAGCCGGACCTCTCGCTCGAGACCGCGTACGAGGTCGTCTCCGATCTGAAGGAATCGCACCCGCTCGAATACGAGATGTTCGGCATCGGTGCGATAGCGGGCAACATCGTGAGCCCGCTGTTCAGCGCTCTCATGGCGTCGTGGGAGCCGCTGCaggcgcccgccgcgcccgtgCCCGTGTTCCGCAAGTGGCGCGCGCTGCTCAGCGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACTACGCGCCACAGATCAAGGCTGCCGCCGCCACTACGCGCCACAGATCAAGGCTGCCGCCGCGTGAGTACTGTGACTGTCACAAGTGGGAGCCGCTGCaggcgcccgccgcgcccgtgCCCGTGTTCCGCAAGTGGCGCGCGCTGCTCAGCGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACTACGCGCCACAGATCAAGGCTGCCGCCGCATCAAGGCTGCCGCCGCGTGAGTACTGTGACTGTCACAAGTGGGAGCCGCTGCaggcgcccgccgcgcccgtgCCCGTGTTCCGCAAGTGGCGCGCGCTGCTCAGCGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACTACGCGCCACAGATCAAGGCTGCCGCCGCCACTACGCGCCACAGATCAAGGCTGCCGCCGCGTGAGTACTGTGACTGTCACAAGTGGGAGCCGCTGCaggcgcccgccgcgcccgtgCCCGTGTTCCGCAAGTGGCGCGCGCTGCTCAGCGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACTACGCGCCACAGATCAAGGCTGCCGCCGCtgTATGGAACCCCCGCATCCCCGAGCCAATGCTGGCGTCCCTGACGGAGTGGTCGGAGGCGTGCCCGCCGTGGGTGTCGGCGTCCGTGGCCGCCAACGTGGTGGCGCCCCGGCTCCTGGAGGCCGTGCGGGGCTGGGACCCCACGCACGACACCCAGCCCCTGCACCATTGGGTGCTACCGTGGCATCCGATAGCTGGTTCGGCGCTGTCGACGGCCGTGTACCCTCTGATCCGGTCGCGCCTGGCGGCGGCGCTGTCGGCGTGGCACCCGGCGGACGGGTCGGCGCGCCCGCTACTGGCGGCGTGGCGCGCCGCGTGGGGCGCCGCGCTCACCGCCATGCTGCACCAGCACATCGTGCCCAAGCTGGAGCACTGTCTGCAGACCGCGCCCGTGCATCTCGTCGGCCGAGAGAACacgGCGTGGCTGTGGTGCGTGGACTGGCTGGAGTTGCTGGGGGCCCCGACGCTGGgcgcggtggcggcgcgcgcgctgctcccGCGCTGGCTGGGCGCGCTGGCCGCGTGGCTCAACACCGCGCCGCCGCACGCCAGCGTGCTCAACAGCTACACGCAGTTCAAGAAAATCTTCCCGGAAGAGGTGCTAAAGGAGCCCGGCGTCCGCGACGCCTTCCGCAAAGCCCTGGACATGATGAACCGCAGCGCCGACATCGACTCGGTGGAGCCCCCTCCCCCGCCGCGCTTCACCGCGCTCACCTCCGAGAAGGAAACCTCTAAGATCGCCGATGTCCTGGCTTCGACAACACAGCAGAAGAGCTTCTCAGAGCTGCTCGAGTCGCGGTGTACAGAAAGAGAAAGAGGTATTACGTTCGTGCCGCTCGCGGGCAAGACGCGGGAAGGTCGGCCGCTGTACAAGATCGGCAGCGACATGCAGTGTTACGTGATACGGAACGTGATCATGTACTCGCGCGATAGCGGCCGGAGCTTCGAGCCCGTCGGGCTGGACCGGCTGCTGGGGATGGCCGAGGAATGA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRRGRAKKEQQIYGVWAKDSDEDDNEDNVRQRTRKQKDYAAPIGFVAGGVQQAGKKKEPKQELEPSEKPSRPQIVDSSDEEPTVVPDESETAGIRRQGQGMRSANLGGSMGTWEKHTKGIGAKLLLQMGYQPGRGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKREEERRLKEKEDEKGPEKSYHWKKSHKGRYFYRDAADVIQEGKPTMHTISSSELSRVPVIDMTGKEKRVLSGYHALRAVAPRFEHEPRRKCTNFSAPQLVHNLEVMVECCEQDIIQNARELQQAEDEIVVLERDLNECDEKLKEQDEIIDKVRDIRERVARLSEPDLSLETAYEVVSDLKESHPLEYEMFGIGAIAGNIVSPLFSALMASWEPLQAPAAPVPVFRKWRALLSEEAYNSLLWQHYAPQIKAAAATTRHRSRLPPREYCDCHKWEPLQAPAAPVPVFRKWRALLSEEAYNSLLWQHYAPQIKAAAASRLPPREYCDCHKWEPLQAPAAPVPVFRKWRALLSEEAYNSLLWQHYAPQIKAAAATTRHRSRLPPREYCDCHKWEPLQAPAAPVPVFRKWRALLSEEAYNSLLWQHYAPQIKAAAAVWNPRIPEPMLASLTEWSEACPPWVSASVAANVVAPRLLEAVRGWDPTHDTQPLHHWVLPWHPIAGSALSTAVYPLIRSRLAAALSAWHPADGSARPLLAAWRAAWGAALTAMLHQHIVPKLEHCLQTAPVHLVGRENTAWLWCVDWLELLGAPTLGAVAARALLPRWLGALAAWLNTAPPHASVLNSYTQFKKIFPEEVLKEPGVRDAFRKALDMMNRSADIDSVEPPPPPRFTALTSEKETSKIADVLASTTQQKSFSELLESRCTERERGITFVPLAGKTREGRPLYKIGSDMQCYVIRNVIMYSRDSGRSFEPVGLDRLLGMAEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00659460;
- 90% Identity
- -
- 80% Identity
- -