Basic Information

Insect: Epinotia bilunana
Gene Symbol: -
Assembly: GCA_947049265.1
Location: CAMRIQ010000056.1:2142076-2167757[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00013 0.011 17.3 1.5 1 23 457 479 457 479 0.96

2 20 0.0063 0.51 12.0 0.6 1 20 485 504 485 507 0.94

3 20 4.5e-05 0.0036 18.8 4.6 1 23 526 548 526 548 0.98

4 20 0.00028 0.023 16.2 4.7 1 23 554 576 554 576 0.99

5 20 5.6e-05 0.0045 18.5 5.3 1 23 582 604 582 604 0.97

6 20 1.2e-05 0.00098 20.6 7.1 1 23 610 632 610 632 0.97

7 20 1.1e-06 8.7e-05 23.9 2.9 1 23 638 660 638 660 0.97

8 20 0.00015 0.012 17.1 6.7 1 23 666 688 666 688 0.97

9 20 2.9e-05 0.0024 19.3 6.4 1 23 694 716 694 716 0.98

10 20 7.3e-07 6e-05 24.4 1.9 1 23 722 744 722 744 0.98

11 20 7.5e-05 0.0061 18.1 7.9 1 23 750 772 750 772 0.98

12 20 3.8e-05 0.0031 19.0 6.4 1 23 778 800 778 800 0.98

13 20 2e-05 0.0016 19.9 5.4 1 23 806 828 806 828 0.98

14 20 1.2e-05 0.00098 20.6 5.9 1 23 834 856 834 856 0.97

15 20 3.3e-05 0.0027 19.2 7.1 1 23 862 884 862 884 0.97

16 20 4.6e-06 0.00037 21.9 6.0 1 23 890 912 890 912 0.98

17 20 0.0002 0.017 16.7 10.0 1 23 918 940 918 940 0.97

18 20 2e-06 0.00016 23.0 4.0 1 23 946 968 946 968 0.97

19 20 0.0011 0.089 14.4 0.3 1 23 975 997 975 997 0.96

20 20 0.1 8.2 8.2 5.5 1 23 1007 1029 1007 1029 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00013	0.011	17.3	1.5	1	23	457	479	457	479	0.96
2	20	0.0063	0.51	12.0	0.6	1	20	485	504	485	507	0.94
3	20	4.5e-05	0.0036	18.8	4.6	1	23	526	548	526	548	0.98
4	20	0.00028	0.023	16.2	4.7	1	23	554	576	554	576	0.99
5	20	5.6e-05	0.0045	18.5	5.3	1	23	582	604	582	604	0.97
6	20	1.2e-05	0.00098	20.6	7.1	1	23	610	632	610	632	0.97
7	20	1.1e-06	8.7e-05	23.9	2.9	1	23	638	660	638	660	0.97
8	20	0.00015	0.012	17.1	6.7	1	23	666	688	666	688	0.97
9	20	2.9e-05	0.0024	19.3	6.4	1	23	694	716	694	716	0.98
10	20	7.3e-07	6e-05	24.4	1.9	1	23	722	744	722	744	0.98
11	20	7.5e-05	0.0061	18.1	7.9	1	23	750	772	750	772	0.98
12	20	3.8e-05	0.0031	19.0	6.4	1	23	778	800	778	800	0.98
13	20	2e-05	0.0016	19.9	5.4	1	23	806	828	806	828	0.98
14	20	1.2e-05	0.00098	20.6	5.9	1	23	834	856	834	856	0.97
15	20	3.3e-05	0.0027	19.2	7.1	1	23	862	884	862	884	0.97
16	20	4.6e-06	0.00037	21.9	6.0	1	23	890	912	890	912	0.98
17	20	0.0002	0.017	16.7	10.0	1	23	918	940	918	940	0.97
18	20	2e-06	0.00016	23.0	4.0	1	23	946	968	946	968	0.97
19	20	0.0011	0.089	14.4	0.3	1	23	975	997	975	997	0.96
20	20	0.1	8.2	8.2	5.5	1	23	1007	1029	1007	1029	0.99

Sequence Information

Coding Sequence: ATGAATTCGGAGCATCACAATATTAACACGGGTGGCGGCCAGCCCCAAGGAAATTCAGAGcagcagcagcagacggCGAATTTGACCCCGACGACGTCTGCCACCGACCTGCGAGTCAACTCGGCGGCTGTAAACGTCGCTTTGTCTAGCGTCGCGAAGTACTGGGTGTTTACAAATCTTTTCCCGGGGCCTATACCACAAGTGTCGGTATATGGGCTGCCCACTGGAACGAGAATAGAAAATGGGAAACCAGTGCAGGACCTTGGTCAATCCCATGCAAGCATACTCAATGGTGATCCCAACATTATACTTGGACATCCGGGACAGACCCAAGTTACTGTCTCGGCGGCGCAACAGTTACCACAGATTATTGCCACACAGACACAAACACATgATGTCCTAGCTCATGTGCAGCAACAAGAGCTACAGCAGGCCACGGTCAACTCCGGACAGGTGACAACTAACACGGGTCAAACAACCCATCAGCAGGTAGCCAATAATCGGGTCGAGTTTGTACACCATAACATTGATATGGTAAATCATGTGGGTCACCACTCGCAACAACACATGCTGCAGCAGCAGCTAATGGCGGCGACGCGCCCAGACCACTCTAACCAGCAGATCCAGCTAACTGTGAGTGAAGACGGGATCGTCACCGTGGTGGACCCGGGCGGGGGCAAACTTGTGGATAAAGAGGAGCTGCACGAGGCGATCAAGATGCCGACGGACCACACCCTCACTGTGCATCAGCTGCAGCAGATTGTGGGGCAACAGGTGCTAGAAAACGTGGTCCGTATCGAGCAAGCCACCGGCGAGCCGGCGAACATTCTCGTGACGCAGAACCCGGACGGCACTACGTCCATAGAAGCCAGCGCCGCGGATCCGCTCGCCGTCGTCAAGGACGAAAAGAATGGCTCCAAGATAGAGACCGCGCACTTCGCTCTGCCCGCAGAGATCAAGGACCTTAAGAGCATCGACTTAAAGAACCCGGACGGCACCACGTTTATAGAGGCCAGCGCCGCGGACCCGCTCGCCGTCGTCAAGGACGAAAAGAACGGCTCCAAGATAGAGAACGCGCACTTCGCTCTGCCCGCCGAGATCAAGGACCTTAAGAGCATCGACTTAAAGAGTGTAGGAGCGATGGGGATGGAAGGAGCCGTAGTGAAGATTTCAGCGGGAGCCTCGGACCACGACATGCACGCCATGTACAAAGTCAACGTGGAAGACCTGTCGCAGCTGCTGGCCTACCACGAGGTCTTCGGCAAACTCAATGCTGACGGTCAGCCCCAAGCCAAAGTAATAGGAGAAGTGGAGGTAGAAGCGGGAACCAGTGCCGCCATGTCCGCCGAGGAGAACTCGCCCGGACACCATGCCTGTGATATTTGTgggaaaatatttcaatttcgATACCAACTCATTGTCCATAGACGGTACCACGGTGAAAGGAAACCTTTCACGTGTCAAGTATGCGGCTCCGCCTTCGCCAATCCCGTGGAGCTGTCGAGACACGGGAAATGCCATCTTGCCGGCGACTCCGCAGACAGGACAGCCAAGCGGTTGACGCAGGACAAGCCGTACGCGTGCACGACCTGCCACAAAACGTTCGCGCGCAAGGAGCACCTCGACAACCACGTGCGCAGCCACACCGGCGAGACGCCCTACAGATGTCAATTCTGCGCGAAGACCTTCACCCGCAAGGAGCACATGGTGAACCACGTCCGCAAGCACACGGGCGAGACGCCGCATCGCTGCGATATCTGTAAGAAAAGCTTCACGCGGAAGGAGCACTTCATGAACCACGTCATGTGGCATACAGGTGAAACTCCACACCATTGTCAAATATGCGGAAAGAAGTATACTAGGAAGGAGCACTTAGCGAACCATATGAGATCACATACGAATGATACCCCATTCCGCTGCGAACTCTGTGGGAAGTCTTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACTGGAGAAACGCCCCACCGCTGCGACTTCTGCTCGAAAACGTTCACGCGCAAAGAGCACCTCCTGAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACAGGTGCAACTACTGCTCCAAGTCCTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGCAAGGACCATCTAGTGAATCACGTGCGACAGCACACCGGCGAGTCGCCGCACAAATGCTCGTTCTGCACCAAGTCGTTCACACGCAAGGAGCACCTGACCAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACAGGTGCACCTACTGCGCCAAGTCGTTCACTAGGAAGGAGCATCTCAACAACCACGTCAGACAGCATACGGGGGAAACGCCGCACAAGTGCACGTTCTGCCCGAAGGCGTACTCGCGCAAGGAGCACCTCAACAACCACATCCGGCAGCACACGGGCGACGCGCCGCACTCCTGCTCCTACTGCAACAAGAGCTTCTCGCGCAAGGAGCATCTCGTCAACCACGTTCGGCAACACACGGGCGAGACGCCTTTCAAGTGCACCTACTGCTCGAAGTCGTTCTCCCGCAAGGAGCACCTCACGAACCACGTGCACCTACACACGGGCGAGACTCCGCACAAGTGCCCCTTCTGCACCAAGACCTTCTCGCGCAAGGAGCACCTGACCAACCACGTCAGGATACACACGGGCGAGTCGCCTCATCGCTGCGAGTTCTGCCACAAAACGTTCACGCGCAAGGAGCACCTCACCAACCACCTCAAGCAGCACACGGGCGACACGCCGCACTCCTGCAAGGTCTGCTCCAAGGCCTTCACCCGCAAGGAGCACCTCGTCGCGCACATGAGGTCGCACAGTTGCGGCGAGCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCGCTCAAGGGCAACCTGCTGTTCCACGAGCGCTCGCACAACAAGGGCGGAGGCGCGGCCCGGCCCTTCCGCTGCGACCTCTGCTCCAAGGACTTCATGTGCAAAGGTCACCTGGCGTCGCACCGGCGCACGCACGCGGCGAGCGCGgacgcgggcgcgggagcgggcgcggagGCGGAAGCGGACGGCGCCGCGGGCGCGGGCGTGGAGCCCGAAGACTGCGGCGACTGCGTCAAGTGCGAGAAGGACGCGCCCGAGCCCGAGCGGAAACACGCACTCAGACCGGCTGCGGACGCGAGGCCGGCTGAAAGCGTTGTAGCACAAAGCCCCCAAGCTAATGCAACTGTGATGCAAATTACCAGCCAACAAGTTCGCGCGCCAGCAGGTGTGGGACTGGACGCGGCCGGCGCCGCCTTCGCGCACCCGGTCACCGTCAACTACTAG
Protein Sequence: MNSEHHNINTGGGQPQGNSEQQQQTANLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQSHASILNGDPNIILGHPGQTQVTVSAAQQLPQIIATQTQTHDVLAHVQQQELQQATVNSGQVTTNTGQTTHQQVANNRVEFVHHNIDMVNHVGHHSQQHMLQQQLMAATRPDHSNQQIQLTVSEDGIVTVVDPGGGKLVDKEELHEAIKMPTDHTLTVHQLQQIVGQQVLENVVRIEQATGEPANILVTQNPDGTTSIEASAADPLAVVKDEKNGSKIETAHFALPAEIKDLKSIDLKNPDGTTFIEASAADPLAVVKDEKNGSKIENAHFALPAEIKDLKSIDLKSVGAMGMEGAVVKISAGASDHDMHAMYKVNVEDLSQLLAYHEVFGKLNADGQPQAKVIGEVEVEAGTSAAMSAEENSPGHHACDICGKIFQFRYQLIVHRRYHGERKPFTCQVCGSAFANPVELSRHGKCHLAGDSADRTAKRLTQDKPYACTTCHKTFARKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLANHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLNNHVRQHTGETPHKCTFCPKAYSRKEHLNNHIRQHTGDAPHSCSYCNKSFSRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHSCKVCSKAFTRKEHLVAHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKGGGAARPFRCDLCSKDFMCKGHLASHRRTHAASADAGAGAGAEAEADGAAGAGVEPEDCGDCVKCEKDAPEPERKHALRPAADARPAESVVAQSPQANATVMQITSQQVRAPAGVGLDAAGAAFAHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00289860;
90% Identity: iTF_00660519;
80% Identity: -