Ebil025164.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000296.1:58488-67018[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-08 6.8e-06 26.8 0.0 3 39 12 48 10 52 0.95 2 2 2.5 1.2e+03 0.4 0.0 21 31 94 104 93 104 0.89
Sequence Information
- Coding Sequence
- ATGGCCAAGCGACAATACAATACTTGGTCCAGTGATGACATGGAAAAAGCTCTTAATGAGTATAAAAATGGCAGATTAAAGTTTAATGAAGCTTGTCGTGCATATAAAATTCCAAAACCAACGTTTCGGCGTCATTTGAAAGGATTGAATGTatacgaaaaaattggtcgcccaaaatgtttgacacaagCAATGGAAGACGAGCTGGTCAGTCACATTTTGGAACTGGAATCCAGATTCTTTGGCGTTACCATACGTGATTTACGTCGCCTAGCATACCAGTTGGCGGAAAAATATGGTTTGCCGCACAGATTTAACCACGAAACAGAATTAGCTGGCTGGAAATggtattataaattcataagAAAATATCCTCAAATATCATTAAGGACTCCAGAACCGACGTCCATGGCTCGTTGTAAGGGATTTaacaaaaaaactgtaatggagttttttgaaaaatatgaaggCCTACTTGATAAAGGAAAATTTGCAGCTCATCAAATCTACAACGTAGACGAGACTGGCTTGAGTACAGTGCATAAGCCCCCAAAAGTTTTAGCTCTTAAGGGAAAACGTCAAGTTGGTGCTGTTACAAGTGGAGAGCGAGGCCTGAATACAACATGTATCTGCTGCATGAACGCGGCTGGAGAATTTATTCCACCTATGCTGATATTTAAGCGCAAAAGAATGACAGATGATCTTAAAAGAGGAGGACCACCAAATACTGTGTACACTTGCTCTGACAGTGGCTGGATAACTTCAGAGTTATTTGTGGATTGGCTGAACCACTTCATCAAGTCTACAAGGCTAGAGAAATCAGAAGAAAAGCAGATTCTTCTCATTTTAGATGGGCATTCAACACACACTAAAAACTTGGGTGCCATCAATCTTGCACGAGAATATGGAATTGTTATGCTTTCTTTGCCACCCCACACTACACACAAACTTCAGCCATTGGACCGATCGTTCTTTAAGCCACTTAAGCTAAATTTCAATTCTGCTTGTACTTCATGGATGAGAAACCACCCAGACTCTGTCATCAAGCAAGCAAACATTTCAGAGATTTTGGGAATGTCATACCCACGAGCTGTCTGTATGGAAACAGCCATCCATGGATTCGAGTCCTGTGGGCTATGGCCTTGTAATCGGTTTAAAATCAGAGATGACGAATATGTTGTACTTGACGAGGACTGTGAAGAACAAGTAGTTGTAGCGATAGCGCCATCAACTAGCTCCAATCCAACTGTGACGGTCGAATCTGCGACTGAAAAACGTCAAGTTCAGGATCAACCAGCAACATTGACACCCCAAGCAACATCAACATTGCCTTGCAACAAGCGAGAGACGGAAACTGTCGGCAGAAATGAAGACACTCAAACTACTGCATGTTTGACCCCAGAAAGAGAGCAGATTCCAAATTTAAGTCCCTCGACATCTACCGGGAGTACAGTTTATGTTCTGCATAGTCACACGGTTGCAGAAACTGGAACGAAGCTTgacaaaaatgataatttggaaGCTACTGAAATTCGGGCAGCCATACAAACTCTCTCTCCCGTGTGTAGTCTTGACTTCGAGAAAGCATTTGATACTGTTGACCAGGAGCAACTGATAGAAGCAATAAAACGCACAGATGTCGACGGCAAAGATATGAGAATGATCAAGAATTTATACTGGGACCAAACAGCACATGTCAAGATCGGAGAATCCGCTACAAAAGACCTGAAAATACTAAAGGGACGCATATTTGTAGAAACATTGGACGGTGTTGGGATGGGCATTAAGTGTAACGGTAGATACATCAACAACATACGATACGCGGACGACACTGTTATACTAGCTAACATAACAGCATGGAAGAACTAA
- Protein Sequence
- MAKRQYNTWSSDDMEKALNEYKNGRLKFNEACRAYKIPKPTFRRHLKGLNVYEKIGRPKCLTQAMEDELVSHILELESRFFGVTIRDLRRLAYQLAEKYGLPHRFNHETELAGWKWYYKFIRKYPQISLRTPEPTSMARCKGFNKKTVMEFFEKYEGLLDKGKFAAHQIYNVDETGLSTVHKPPKVLALKGKRQVGAVTSGERGLNTTCICCMNAAGEFIPPMLIFKRKRMTDDLKRGGPPNTVYTCSDSGWITSELFVDWLNHFIKSTRLEKSEEKQILLILDGHSTHTKNLGAINLAREYGIVMLSLPPHTTHKLQPLDRSFFKPLKLNFNSACTSWMRNHPDSVIKQANISEILGMSYPRAVCMETAIHGFESCGLWPCNRFKIRDDEYVVLDEDCEEQVVVAIAPSTSSNPTVTVESATEKRQVQDQPATLTPQATSTLPCNKRETETVGRNEDTQTTACLTPEREQIPNLSPSTSTGSTVYVLHSHTVAETGTKLDKNDNLEATEIRAAIQTLSPVCSLDFEKAFDTVDQEQLIEAIKRTDVDGKDMRMIKNLYWDQTAHVKIGESATKDLKILKGRIFVETLDGVGMGIKCNGRYINNIRYADDTVILANITAWKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00656043; iTF_00656044; iTF_00656045; iTF_00656046; iTF_00656049;
- 90% Identity
- iTF_00656046;
- 80% Identity
- iTF_00656043;