Ebil031962.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000439.1:444097-446414[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-08 5.6e-06 27.1 0.0 3 39 12 48 10 52 0.95 2 2 2.1 1e+03 0.6 0.0 21 31 94 104 93 104 0.89
Sequence Information
- Coding Sequence
- ATGGCCAAGCGACAATACAATACTTGGTCCAGTGATGACATGGAAAAAGCTCTTAATGAGTATAAAAATGGCAGATTAAAGTTTAATGAAGCTTGTCGTGCATATAAAATTCCAAAACCAACGTTTCGGCGTCATTTGAAAGGATTGAATGTatacgaaaaaattggtcgcccaaaatgtttgacacaagCAATGGAAGACGAGCTGGTCAGTCACATTTTGGAACTGGAATCCAGATTCTTTGGCGTTACCATACGTGATTTACGTCGCCTAGCATACCAGTTAGCGGAAAAATATGGTTTGCCGCACAGATTTAACCACGAAACAGAATTAGCTGGCTGGAAATggtattataaattcataagAAAATATCCTCAAATATCATTAAGGACTCCAGAACCGACGTCCATGGCTCGTTGTAAGGGATTTAACAAAAAAAGTGTAAtggagttttttgaaaaatatgaaggCCTACTTGATAAAGGAAAATTTGCAGCTCATCAAATCTACAACGTAGACGAGACTGGCTTGAGTACAGTGCATAAGCCCCCAAAAGTTTTAGCTCTTAAGGGAAAACGTCAAGTTGGTGCTGTTACAAGTGGAGAGCGAGGCCTGAATACAACATGTATCTGCTGCATGAACGCGGCTGGAGAATTTATTCCACCTATGCTGATATTTAAGCGCAAAAGAATGACAGATGATCTTAAAAGAGGAGGACCACCAAATACTGTGTACACTTGCTCTGACAGTGGCTGGATAACTTCAGAGTTATTTGTGGATTGGCTGAACCACTTCATCAAGTCTACAAGGCTAGAGAAATCAGAAGAAAAGCAGATTCTTCTCATTTTAGATGGGCATTCAACACACACTAAAAACTTGGGTGCCATCAATCTTGCACGAGAATATGGAATTGTTATGCTTTCTTTGCCACCCCACACTACACACAAACTTCAGCCATTGGACCGATCGTTCTTTAAGCCACTTAAGCTAAATTTCAATTCTGCTTGTACTTCATGGATGAGAAACCACCCAGACTCTGTCATCAAGCAAGCAAACATTTCAGAGATTTTGGGAATGTCATACCCACGAGCTGTCTGTATGGAAACAGCCATCCATGGATTCGAGTCCTGTGAGCTATGGCCTTGTAATCGGTTTAAAATCAGAGATGACGAATATGTTGTACTTGACGAGGACTGTGAAGAACAAGTAGTTGTAGCGATAGCGCCATCAACTAGCTCCAATCCAACTGTGACGGTCGAATCTGCGACTGAAAAACGTCAAGTTCAGGATCAACCAGCAACATTGACACCCCAAGCAACATCAACATTGCCTTGCAACAAGCGAGAGACGGAAACTGTCGGCAGAAATGAAGACACTCAAACTACTGCATGTTTGACCCCAGAAAGAGAGCAGATTCCAAATTTAAGTCCCTCGACATCTACCGGGAGTACAGTTTATGTTCTGCATAGTCACACGGTTGCAGAAACTGGAACGAAGCTTgacaaaaatgataatttggaaGCTACTGAAATTCGGGCAGCCATACAAACTCTCTCTCCCGTGTGTAGTCTTGATATTAGCATGTTCCCTTAG
- Protein Sequence
- MAKRQYNTWSSDDMEKALNEYKNGRLKFNEACRAYKIPKPTFRRHLKGLNVYEKIGRPKCLTQAMEDELVSHILELESRFFGVTIRDLRRLAYQLAEKYGLPHRFNHETELAGWKWYYKFIRKYPQISLRTPEPTSMARCKGFNKKSVMEFFEKYEGLLDKGKFAAHQIYNVDETGLSTVHKPPKVLALKGKRQVGAVTSGERGLNTTCICCMNAAGEFIPPMLIFKRKRMTDDLKRGGPPNTVYTCSDSGWITSELFVDWLNHFIKSTRLEKSEEKQILLILDGHSTHTKNLGAINLAREYGIVMLSLPPHTTHKLQPLDRSFFKPLKLNFNSACTSWMRNHPDSVIKQANISEILGMSYPRAVCMETAIHGFESCELWPCNRFKIRDDEYVVLDEDCEEQVVVAIAPSTSSNPTVTVESATEKRQVQDQPATLTPQATSTLPCNKRETETVGRNEDTQTTACLTPEREQIPNLSPSTSTGSTVYVLHSHTVAETGTKLDKNDNLEATEIRAAIQTLSPVCSLDISMFP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00656048;
- 90% Identity
- iTF_00656046;
- 80% Identity
- -