Ebil016705.1
Basic Information
- Insect
- Epinotia bilunana
- Gene Symbol
- -
- Assembly
- GCA_947049265.1
- Location
- CAMRIQ010000170.1:1946552-1952427[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-08 5.8e-06 27.0 0.0 3 39 12 48 10 52 0.95 2 2 2.2 1.1e+03 0.6 0.0 21 31 94 104 93 104 0.89
Sequence Information
- Coding Sequence
- ATGGCCAAGCGACAATACAATACTTGGTCCAGTGATGACATGGAAAAAGCTCTTAATGAGTATAAAAATGGCAGATTAAAGTTTAATGAAGCTTGTCGTGCATATAAAATTCCAAAACCAACGTTTCGGCGTCATTTGAAAGGATTGAATGTatacgaaaaaattggtcgcccaaaatgtttgacacaagCAATGGAAGACGAGCTGGTCAGTCACATTTTGGAACTGGAATCCAGATTCTTTGGCGTTACCATACGTGATTTACGTCGCCTAGCATACCAGTTGGCGGAAAAATATGGTTTGCCGCACAGATTTAACCACGAAACAGAATTAGCTGGCTGGAAATggtattataaattcataagAAAATATCCTCAAATATCATTAAGGACTCCAGAACCGACGTCCATGGCTCGTTGTAAGGGATTTaacaaaaaaactgtaatggagttttttgaaaaatatgaaggCCTACTTGATAAAGGAAAATTTGCAGCTCATCAAATCTACAACGTAGACGAGACTGGCTTGAGTACAGTGCATAAGCCCCCAAAAGTTTTAGCTCTTAAGGGAAAACGTCAAGTTGGTGCTGTTACAAGTGGAGAGCGAGGCCTGAATACAACATGTATCTGCTGCATGAACGCGGCTGGAGAATTTATTCCACCTATGCTGATATTTAAGCGCAAAAGAATGACAGATGATCTTAAAAGAGGAGGACCACCAAATACTGTGTACACTTGCTCTGACAGTGGCTGGATAACTTCAGAGTTATTTGTGGATTGGCTGAACCACTTCATCAAGTCTACAAGGCTAGAGAAATCAGAAGAAAAGCAGATTCTTCTCATTTTAGATGGGCATTCAACACACACTAAAAACTTGGGTGCCATCAATCTTGCACGAGAATATGGAATTGTTATGCTTTCTTTGCCACCCCACACTACACACAAACTTCAGCCATTGGACCGATCGTTCTTTAAGCCACTTAAGCTAAATTTCAATTCTGCTTGTACTTCATGGATGAGAAACCACCCAGACTCTGTCATCAAGCAAGCAAACATTTCAGAGATTTTGGGAATGTCATACCCACGAGCTGTCTGTATGGAAACAGCCATCCATGGATTCGAGTCCTGTGGGCTATGGCCTTGTAATCGGTTTAAAATCAGAGATGACGAATATGTTGTACTTGACGAGGACTGTGAAGAACAAGTAGTTGTAGCGATAGCGCCATCAACTAGCTCCAATCCAACTGTGACGGTCGAATCTGCGACTGAAAAACGTCAAGTTCAGGATCAACCAGCAACATTGACACCCCAAGCAACATCAACATTGCCTTGCAACAAGCGAGAGACGGAAACTGTCGGCAGAAATGAAGACACTCAAACTACTGCATGTTTGACCCCAGAAAGAGAGCAGATTCCAAATTTAAGTCCCTCGACATCTACCGGGAGTACAGTTTATGTTCTGCATAGTCACACGGTTGCAGAAACTGGAACGAAGCTTgacaaaaatgataatttggaaGCTACTGAAATTCGGGCAGCCATACAAACTCTCTCTCCCGTGTGTAGTCTTGAATTTAACGTGACAGCGACGCCTCTGTACCGGCACCTGGGCTGCTACTTCTGGATCGTGTAG
- Protein Sequence
- MAKRQYNTWSSDDMEKALNEYKNGRLKFNEACRAYKIPKPTFRRHLKGLNVYEKIGRPKCLTQAMEDELVSHILELESRFFGVTIRDLRRLAYQLAEKYGLPHRFNHETELAGWKWYYKFIRKYPQISLRTPEPTSMARCKGFNKKTVMEFFEKYEGLLDKGKFAAHQIYNVDETGLSTVHKPPKVLALKGKRQVGAVTSGERGLNTTCICCMNAAGEFIPPMLIFKRKRMTDDLKRGGPPNTVYTCSDSGWITSELFVDWLNHFIKSTRLEKSEEKQILLILDGHSTHTKNLGAINLAREYGIVMLSLPPHTTHKLQPLDRSFFKPLKLNFNSACTSWMRNHPDSVIKQANISEILGMSYPRAVCMETAIHGFESCGLWPCNRFKIRDDEYVVLDEDCEEQVVVAIAPSTSSNPTVTVESATEKRQVQDQPATLTPQATSTLPCNKRETETVGRNEDTQTTACLTPEREQIPNLSPSTSTGSTVYVLHSHTVAETGTKLDKNDNLEATEIRAAIQTLSPVCSLEFNVTATPLYRHLGCYFWIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00656048;
- 90% Identity
- iTF_00656043; iTF_00656044; iTF_00656045; iTF_00656048; iTF_00656049;
- 80% Identity
- -