Eman013033.1
Basic Information
- Insect
- Ephialtes manifestator
- Gene Symbol
- -
- Assembly
- GCA_963970395.1
- Location
- OZ019970.1:17550218-17560060[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.021 3.9 9.5 2.0 1 23 358 380 358 380 0.95 2 19 0.032 6.1 8.9 0.6 2 23 425 446 424 446 0.95 3 19 0.001 0.2 13.6 1.0 1 21 518 538 518 540 0.91 4 19 0.0054 1 11.4 1.2 1 23 544 566 544 566 0.97 5 19 5.8e-06 0.0011 20.7 0.5 2 23 660 681 659 681 0.97 6 19 4.3e-05 0.0081 18.0 3.1 3 23 688 708 686 708 0.96 7 19 0.0012 0.23 13.4 0.4 1 21 714 734 714 738 0.92 8 19 8e-05 0.015 17.1 3.7 1 23 821 844 821 844 0.95 9 19 6e-05 0.011 17.5 3.9 1 23 911 933 911 933 0.97 10 19 0.00066 0.12 14.2 1.1 1 20 938 957 938 959 0.94 11 19 0.002 0.38 12.7 0.5 2 23 970 991 970 991 0.96 12 19 1.6e-05 0.003 19.3 0.7 2 23 1028 1049 1027 1049 0.97 13 19 6e-06 0.0011 20.7 1.2 1 23 1054 1076 1054 1076 0.97 14 19 0.00025 0.047 15.6 1.8 1 23 1082 1104 1082 1104 0.98 15 19 5.6e-06 0.0011 20.7 0.4 1 23 1120 1142 1120 1142 0.95 16 19 3.2e-06 0.00061 21.5 0.3 1 23 1148 1170 1148 1170 0.98 17 19 2.3e-05 0.0044 18.8 0.3 1 23 1176 1198 1176 1198 0.98 18 19 0.00018 0.035 16.0 4.1 1 23 1204 1226 1204 1226 0.96 19 19 0.0078 1.5 10.9 0.7 1 20 1232 1251 1232 1253 0.90
Sequence Information
- Coding Sequence
- ATGGACGCCGTTGAGATAGATACGGCGGATGGAGCTCAAAACGAAGATGCCATAGAGGCGACAGTGCCGGAGGTTTGTCGGGTTTGCCTCCTAGGCAATTTAATGATGAGGGATCTCTTCCTGGAGAACGAGGTCGTCTCCTTGTCGACGAAAGCCATGAATTTCGCCAGTGTAAAGATGCTGCCAGGAGATGGACTACCTGGACAAGTGTGTTACGACTGTGCTGACAAATTGGATTCTGCATATGAGTTTAAACTCCAGGTTGAACAAGCGGACAATGTACTCAGACAGAGATACGATTCGCTGAATATCAAAGAAGAGCTTTTCTTTAATGAAGTTGAAGTTCATTTGGAGGGAGAACGTGGTGATGATGTACATACTCTGGAGGTCGATGAGCATTATCAAGCTACTGTCGATAGCTTAACTGCTGCTGAAGCTGAGGGTGAAAAACCTGGACTTCTCAAGGATCATTTAGCCCTGCTGCAGGTTCAGAAGCTTGCGCAGCAAGAATGTGTTGGATCTGCTGAACAAAAACACACCGTCGAAATTGTGGAGGAATCTACCGTCGCTGGTATTCTCGAATCCACCGAAGAACACAGTCAATATCTGCACGAAAACGAGGAAAACAACGAATGTCTGGCGGCTTGCGAGGTGTACAGAAACTCGGTAAAAAATGAAAGTCTACACGACATCGAAGGAATTCCAATAGACGAGCACAACTATATTATGCAGCAAGGATACACATTGACGAGGCCCGAGGAGGAACTAGAGTCTCAAGAGAGCGTAGATTCGGGTGCTCACGAGTCCGCCGAATACTTGTCTTTGATCGACGAAGAGATGAACCCAAAAGACGATACAAGTACGACGAAAATTTTGGAATCCATGAAAACCGAAGACCAACAACAAGAGCAGCCCGCACATGAAAACGTTGATAATTCACCGAGTGAAACGCGCCGAAGCAAACGCAAACTGATGAAACGCGTTCGAAACACCGACGAGGAAAGTTATTTCGAGAATCTTAATCTCAGCAGCAGATTGAAAAAGACGcaagaaaaatcggaaaaagttTATTTTCTATGTTACCTCTGTGACAAGCAATTCATATCGAAGGAGATACTTAAAGAGCACATGCATTCTCACGAGGAAGTGAGGCGAACCCTGTCGTTGAAAAAATCCGAGAAGGTGGAAAAGCGACAGAGTCCGACGAAAACCCCAGTTGCAGGAGTATCTTCATCATCTTCGGTGCCAACGTCGTCCGGTAAAAAGCCCAATAAATGCCCGTACTGCGGCAAAGAGTATTTATATGTAATATCGTTCAACAAGCATCTCAAGCAGCACGAAAGAAATAAAGATTCATCGAGAGACGCCGCGGCAATTTCGTTCGAAGAATCTCTTCACGCCGATGACGATTCGTCGGATTTTGTGGGTTACGAGGACGCGAGAATTTCCGAAGCGAACAGTCGAGTGGAGCGAGCGAACGAGGACGAGGAGAGCGAGGATACAAGTCCAGGGAGGAAAAAGCGAAGGCGATCTGCACGTTCGGATGTCACTTACACTTGTGACAAATGCCCACTAAAATTCACAACCAAAAAAGCCCTCTTTGAACACAGCGTCGAGCACAGTACGATCTTTAAATGTAGTACTTGCGAGCAGGAATTCGATGAGCTCGAAAAATTGCGACGGCATCGATCGGAACACGTGGTTGAGGGAGTTTTGTCGGAACAGGATCTTGAAGATAACGTTTACGAGCGAGAGTTTGACGCCGAAGCCCCGGATGACGGGGTAGAAATTTACGGAGCCGAAGAGGCACAGGAAATGCATCTGGAAGCTACGAGCCACGAGCAAGAGGACTCACAACAGGGAGACGAAAACGGAAGCGATTGGCGACTCGAAGTTCAGCCAGAGGAGTATGAGATGCCCGAGTGCAAGGAAAGGGTCGATGTAATCGAGGGTAATTGGTCGGAAAGCAAGGATCTCAAATGTCCGAATTGCCCCATGACTTATTCACAAAAAAAGTCACTGGCGCGGCACATGGAGAGCCACGAGGGCACTACTTATGGTTGCAAGATTTGCAAGCAAAAATTCACAAGAAAAGATCATCTTCAGCGTCACGTGGAGCAACATGGAAAATCTAAATCATTCAAATGCACAGAATGCAACAAAATCTTCGGCAACGAGTTGACACTGAGAAATCATCTCATAGCGACGAGTCACAAGACTGTCGTGCACGGCGAAGCTTATGATCCAAACAAACGGTTGAAACGCATAGCCGCTAAAGCAGCGCAGAAAATAATCGATAAAATTAAGACGGAGGATGGTATTGAGGAGTATGGTGAGGAAGAGGATGCTAAGGAAGTCAGAAACTCAAAGGGCAACGTGCGATGGGCGCGAAACGACGAAAAAGTTCATCCTACAGCTTCGGCGCGAAAGGTCCAACATCGCAATCGGCGGAGATCCGATTTTGAGTGTGAAACTTGCGGGAGAAAGTGCAGCTCCAAACAGTCGTTGACAAAGCACATGGAACAGTATCACGTTAAGGAGGAGAAACTAGAGACGCAAGTGAAGATTGAAAAGGGaaagaaaaatagtttaatcGATGGAGGCGATAAATCGGCTTGTGGAACGCAGAAATTAAGCGGTAATCATGAGGACAGAAACGAGGATGACGAAGAGGAGGATGGTGATAACAATTCGGACTTTGAGAGCGGGCTCGACTGGCCGATGGACAATCACGAGTGTCCAACATGCAAGAAGAAATACAGCACCAAAAAATCTCTGCTTCGTCATCAATTGCTTCATGAAGAGCCGAACTTTGAGTGCGACATATGCAATGTGAAATTCTATCGAAAGGACAAACTAAAGTCGCATTACGACAAATGCTCGGAGAAGAATCCTGATCAGGTCAGGAAATGCAATATCTGCGGGGACAGCTTTGAAAACAACGAGATGCTGAAGGAACACAGGGGAAAACATGTGGATGAGGGAATTTTGACGGAAGAGGATCTCAGGGAAATCGAACCTGATGAGAGAAAAGTTGACGGCAAAGTTGTGCGGAAAAGACGAACCGACATAGTCGGCCTTGAATGCACAGAGTGCAACAAACGATACACCTCACGCAAGGGTCTCCTCCGACATATACAGgTGCACGAGGGCAAAAAGTATCCATGCGATATATGCCCGAAAAAGTTTTACCGACGTGAACATCTGAAAATTCACGTTGCCAAGCACAACATGATAAAGCCGTACAAGTGTTCTCGTTGCACCAAACGCTTCATAAAGGAGGAGCAGTTGGCGAATCATCTGTCGAAGCACGATCGTACCTATAAAAAGACAAAAGAGACCGACAGCTCAAAGAGATTCTTGTGCGAAATATGCTCAAAGAGCTTCACGCAATCAACGACACTAATAGCTCATCTTCGAGCTCACAATGGAATCAAACCTTACATCTGCGAGGTCTGCGCTCGTCCCTTCACCACAAATGCCTATCTCAAAATGCATATGCGGACTCACACACAGGAACGACCTTACAGTTGCCAATATTGTCAGCGGGCATTCGCCCGAGCGGATACACTAGCCAATCATCTGACCTCACACACTGGCGAAGCTAAATATCATTGCAAGTACTGTCCAAAAAATTTCCGCCGACTAAAGTCCCTCAAAGAGCACGTATTTATCCACACCGGCCAACGTCCCTATTCTTGTCCAACATGCGATCGCCGCTTTAACAACAACGGCAGCCGTTACGCTCACAGTAAGCGTTGCAAACAGAATCTCCTTCAAAATCAGAATCGGCCCCAAACAATGCAACAGATAGTACAGAACGCTCCGCAATCAATAAGAATACATCAGATAACCGGCGAAAACGGGGCATCAATGCAGGTCGTAAAATCACAGAATATCAAGACGATCACGATTGCCAGGCCTGGAGATCAGGTAACTGCTCATCAGGTGATGCAGCATCAGGAAATACTCATGCCACTCATTCTACCCCTCACTGTTACGCTCACCGACGTCGATGAGGAAGTTATTTTACCGGAGGGCACCAAGATATTTACCACtgcttaa
- Protein Sequence
- MDAVEIDTADGAQNEDAIEATVPEVCRVCLLGNLMMRDLFLENEVVSLSTKAMNFASVKMLPGDGLPGQVCYDCADKLDSAYEFKLQVEQADNVLRQRYDSLNIKEELFFNEVEVHLEGERGDDVHTLEVDEHYQATVDSLTAAEAEGEKPGLLKDHLALLQVQKLAQQECVGSAEQKHTVEIVEESTVAGILESTEEHSQYLHENEENNECLAACEVYRNSVKNESLHDIEGIPIDEHNYIMQQGYTLTRPEEELESQESVDSGAHESAEYLSLIDEEMNPKDDTSTTKILESMKTEDQQQEQPAHENVDNSPSETRRSKRKLMKRVRNTDEESYFENLNLSSRLKKTQEKSEKVYFLCYLCDKQFISKEILKEHMHSHEEVRRTLSLKKSEKVEKRQSPTKTPVAGVSSSSSVPTSSGKKPNKCPYCGKEYLYVISFNKHLKQHERNKDSSRDAAAISFEESLHADDDSSDFVGYEDARISEANSRVERANEDEESEDTSPGRKKRRRSARSDVTYTCDKCPLKFTTKKALFEHSVEHSTIFKCSTCEQEFDELEKLRRHRSEHVVEGVLSEQDLEDNVYEREFDAEAPDDGVEIYGAEEAQEMHLEATSHEQEDSQQGDENGSDWRLEVQPEEYEMPECKERVDVIEGNWSESKDLKCPNCPMTYSQKKSLARHMESHEGTTYGCKICKQKFTRKDHLQRHVEQHGKSKSFKCTECNKIFGNELTLRNHLIATSHKTVVHGEAYDPNKRLKRIAAKAAQKIIDKIKTEDGIEEYGEEEDAKEVRNSKGNVRWARNDEKVHPTASARKVQHRNRRRSDFECETCGRKCSSKQSLTKHMEQYHVKEEKLETQVKIEKGKKNSLIDGGDKSACGTQKLSGNHEDRNEDDEEEDGDNNSDFESGLDWPMDNHECPTCKKKYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKSHYDKCSEKNPDQVRKCNICGDSFENNEMLKEHRGKHVDEGILTEEDLREIEPDERKVDGKVVRKRRTDIVGLECTECNKRYTSRKGLLRHIQVHEGKKYPCDICPKKFYRREHLKIHVAKHNMIKPYKCSRCTKRFIKEEQLANHLSKHDRTYKKTKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYICEVCARPFTTNAYLKMHMRTHTQERPYSCQYCQRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYSCPTCDRRFNNNGSRYAHSKRCKQNLLQNQNRPQTMQQIVQNAPQSIRIHQITGENGASMQVVKSQNIKTITIARPGDQVTAHQVMQHQEILMPLILPLTVTLTDVDEEVILPEGTKIFTTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00414493;
- 90% Identity
- iTF_00343335;
- 80% Identity
- -