Efla017193.1
Basic Information
- Insect
- Endotricha flammealis
- Gene Symbol
- ZNF202
- Assembly
- GCA_905163395.1
- Location
- LR990879.1:7195401-7201294[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.056 1.7e+02 3.3 0.1 21 40 40 60 30 64 0.79 2 13 0.18 5.6e+02 1.7 0.0 11 46 354 389 346 395 0.78 3 13 0.058 1.8e+02 3.3 0.0 21 46 392 417 384 423 0.81 4 13 0.019 60 4.8 0.0 21 46 420 445 413 451 0.84 5 13 0.0091 28 5.8 0.1 21 47 448 474 437 480 0.80 6 13 0.053 1.6e+02 3.4 0.0 21 46 476 501 471 507 0.83 7 13 0.02 60 4.8 0.0 21 46 504 529 497 535 0.84 8 13 0.015 47 5.1 0.1 21 46 532 557 524 563 0.82 9 13 0.021 65 4.6 0.1 21 46 560 585 556 591 0.84 10 13 0.058 1.8e+02 3.3 0.0 21 46 588 613 584 619 0.83 11 13 0.024 73 4.5 0.0 21 46 616 641 612 647 0.84 12 13 0.012 38 5.4 0.0 21 50 644 673 639 675 0.84 13 13 0.005 15 6.6 0.1 21 45 672 696 668 701 0.89
Sequence Information
- Coding Sequence
- ATGTCTTTTCTATCTGTGTGTAGATTATGCCTTGTTGATAACGCAAAAATGCACATTATTTGCGACACACCATTACAAGAAGTTTATGAAAAACTGACGAGTTGTTCTCTGTACACATCACAGAAGCCGGTACTGGCATGTTACATATGCTTAGCGCACCTCCGGAGTGCCCGTGCTCTGATGTTGAGGGCTTCGAAAGCTAATGCAGTGCTCACAGAGTTCTTGAATACGGAAACATTGTTCACAGAAAAATCATTAACAATTATTATTGAAAGGGCGTCATATAAACTAAACAGCCCATTGACTTATTCGCAAATAGAGCATAATGTTGTGGGTTCGAATCCTGTGAAAATTGAGGTGAAAGAAGAACCGACATATTTGGACATTGAAAAGAAAAATATAGACATAGAACAAGACTCACCTCTCCAAGACCAAGAAAGACTAGAATCAGACCAGGACGAATCACAACCTACTGTGTCCGACTCCGAAGATGATCTACCACTCACCACAGGAAAAACGAAGGAAAAAATTAAAGGGAAACCTCATTTGAAAGTTACGAAAAATGATTTAGTCGCCAAGCCAGTGGAAGAACAAAACGTCCCATCTACACAGAGGTTTTGTGAAGATTGCAATATACAATTTAAAACTTTGGAGGCGTGGAAATGTCATATACTTACTTCACCTAAACATACTATAGACAGTGGTGGCAGAACAATGAAACTAATTCTGCGCAAGTACAATCCGCCGCGGGGACTCGCAGCTAAATATGGTGAACCTCCAATGAAGAAAACTAAAGTAACACACACGGACATAAATGAAAAAACAAATTTACAAATCAACGCAAATATTCAACCAAGATGTCAGGAAACAGAAATAAATAACGCAGTTAACATTGAAACGCCAAAACCAAAAAATATTAACAAAACTACGTGTAACCAAACCGACATTGAATATATTTGCGATGATTGCGGCTCCAAATTCGATGATAAATGTTTACTTACTAAACATATAGAACATCATAATTTAATGAAATCTAAAATTCAATTGAGTCATAACAAAGGTAGTTTAAACGCGTCTTCATTGACAAGAAAAGATAAATCAAATATGTGCGAAATATGTAACAAGGGATTTACTACAAGTAGTCATTTAAAAACTCATCTAAGGACACACTCAGGAGAAAAGCCTTACAAATGTGAGATATGTAATAAGAGATTTAATAAAAATGGTGATTTAACAAAACATTTAAGAACACACTCAGGAGAAAAGCCTTACAAATGTGAGATATGTAATAAGAGATTTAATGAAAGTGGTCATTTAAAAACCCATCTAAGAACACACTCAGGAGAAAAGCCTTATAAATGTGAGATATGTAAGATGAGATTTAATCGAAGTGATCATTTAAAAACCCATCTAAGAACACACTCAGGAGAAAAGCCTTACAAATGTGAGATATGTAAGAAGAGTTTTAATAAAAATGGTGATTTAACAAAACATTTAAGAACACACTCTGGAGAAAAGCCTTACAAATGTGAGATATGTAATAAGAGATTTAATGAAAGTGGTCATTTAAAAACCCATCTAAGAACACACTCAGGAGAAAAGCCTTATAAATGTGAGATATGTAAGATGAGATTTAATCGAAGTGGTCATTTAAAAACCCATCTAAGAACACACTCAGGAGAAAAGCCTTACAAATGTGAGATATGTAAGATGAGATTTAATCGAAGTGGTCATTTAAAAACCCATCTAAGAACACACTCAGGAGAAAAGCCTTACAAATGTGAGATATGTAAGAAGAGTTTTAATAAAAATGGTGATTTAACAAAACATTTAAGAACACACTCTGGAGAAAAGCCTTACAAATGCGAGATATGTAATAAGAGATTTAATGAAAGTGGTCATTTAAAAACCCATCTAAGAACACACTCAGGAGAAAAGCCTTACAAATGTGAGATATGTAATAAGTGTTTTGATGGAAGTGGTCATTTAAAAACCCATCTAAGAATGCACTCGGGAGAAAAGCCTTATAAATGTGAGATATGTAATAAGAGATTTAATCGAAGTGGTAATTTAAAAATCCATTTAAGAACACACTGTAGTAAAGCCTGA
- Protein Sequence
- MSFLSVCRLCLVDNAKMHIICDTPLQEVYEKLTSCSLYTSQKPVLACYICLAHLRSARALMLRASKANAVLTEFLNTETLFTEKSLTIIIERASYKLNSPLTYSQIEHNVVGSNPVKIEVKEEPTYLDIEKKNIDIEQDSPLQDQERLESDQDESQPTVSDSEDDLPLTTGKTKEKIKGKPHLKVTKNDLVAKPVEEQNVPSTQRFCEDCNIQFKTLEAWKCHILTSPKHTIDSGGRTMKLILRKYNPPRGLAAKYGEPPMKKTKVTHTDINEKTNLQINANIQPRCQETEINNAVNIETPKPKNINKTTCNQTDIEYICDDCGSKFDDKCLLTKHIEHHNLMKSKIQLSHNKGSLNASSLTRKDKSNMCEICNKGFTTSSHLKTHLRTHSGEKPYKCEICNKRFNKNGDLTKHLRTHSGEKPYKCEICNKRFNESGHLKTHLRTHSGEKPYKCEICKMRFNRSDHLKTHLRTHSGEKPYKCEICKKSFNKNGDLTKHLRTHSGEKPYKCEICNKRFNESGHLKTHLRTHSGEKPYKCEICKMRFNRSGHLKTHLRTHSGEKPYKCEICKMRFNRSGHLKTHLRTHSGEKPYKCEICKKSFNKNGDLTKHLRTHSGEKPYKCEICNKRFNESGHLKTHLRTHSGEKPYKCEICNKCFDGSGHLKTHLRMHSGEKPYKCEICNKRFNRSGNLKIHLRTHCSKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00648768;
- 90% Identity
- iTF_00648355;
- 80% Identity
- iTF_00648355;