Efor000732.1
Basic Information
- Insect
- Encarsia formosa
- Gene Symbol
- Lrrfip2_1
- Assembly
- GCA_030522645.1
- Location
- JAPYYY010000098.1:5171-7697[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.9e-112 1.9e-107 360.9 35.2 1 300 29 324 29 324 0.94 2 3 0.0087 5.5e+02 1.4 3.4 122 171 324 373 323 376 0.89 3 3 0.083 5.3e+03 -1.8 6.2 135 231 358 391 344 399 0.43
Sequence Information
- Coding Sequence
- ATGGAGACATCGGTGGCAGGCCGGAGGCGGACTGCTACCAGGCACTCTGCAGAAGATCAAGCATTAGATCAGATTGCCAAAGAgGCTGAAGCAAGATTAGCTGCAAGAAGACAAGCCAGAGCAGAAGCAAGAGAAATACGAATGAGGGAACTTGAAAGGCAACAGAAAGAAGCTGAAGAAAATGCTGATAGAGTATTTGATATGTGTACAGCTGATGCAAACAGAGCCATGAGGGTAACACCAGATCCTATCCGAGCTTCACGCCTACTGGCCAACAGTAATAACTTCAGCCGAAGATCTTCTGAAGACTCTTTGGAAGATGCCGGTCTTGGTAGAGATCTTAGAatagaGCTCAAAGAGTTTGAAGAAAAGTTCAGAAAAGCAATGATAGCAAATGCTCAACTAGACAATGAAAAGTCTTCCTATGCATATCAAGTAGATTTACTTAAGGATAAATTAGAAGAGCTTGAAGAAATGACTGCACAGTTGCGTCGTGAACTCAGAGAAAAAAATCGAGAGGCTGATCAGTCAAAACGACTTGGTCAACGATTGAAAGAAGATCTAGATATTTGCAAAGCACAACTATTAGAGAGAGATACTCTTATACAAGAAAATGGTTTGGTAATCGTGGAAGATGAAAGTAGTGAAGGTGAAGAATTGCAAAAAGAGAATGGacctgtttataaaaaaagagtgCTAGTCAGTACAGAAGCTGCAGAGTTATTACAAAATGCTGGAGAAGGTTCTTTAGATGTCAGACTCAGAAAGTTTGCATCTGAGAAGAAAGAATTACAAGATGAGATTAGACACCTCAGATTAGAGTTAGAAGAAGCTAGAAATCGAATGAGGCCGGAACGGTCATCGGGTTCTATGCTTGgtttATCAGATTCAGAAGATGCCCAGAGAGAGGCTAATAAATTATTAGCagattacaaatttaaattacaaaaagctGAGCAAGATATGTCTACTCTCCAAGCAACAGTAGCTAGGCTGGAAAGTCAAGTTATTCGTTATAAGTCTGCTGCTGAAGCTTCAGAAAAAGCAGAAGatgaattaaaagttgaaaaaagaaaattacaaaGAGAgATCAGAGAATCTCAGAGTCGTGTTGAAGAACTGGAAACTTCAAATTCGCATTTACAACGACGTTTAGATAAACTGAAAAATGCTAAATCTGCGCTGTTAAAAGAACTTTGA
- Protein Sequence
- METSVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVFDMCTADANRAMRVTPDPIRASRLLANSNNFSRRSSEDSLEDAGLGRDLRIELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEEMTAQLRRELREKNREADQSKRLGQRLKEDLDICKAQLLERDTLIQENGLVIVEDESSEGEELQKENGPVYKKRVLVSTEAAELLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLELEEARNRMRPERSSGSMLGLSDSEDAQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREIRESQSRVEELETSNSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01428278;
- 80% Identity
- -