Este022025.1
Basic Information
- Insect
- Empis stercorea
- Gene Symbol
- -
- Assembly
- GCA_949752835.1
- Location
- OX457088.1:26702058-26706830[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.9e-11 1.3e-07 32.0 0.0 1 38 554 592 554 597 0.89 2 4 1.8e-13 2.3e-10 40.8 0.2 2 39 609 646 608 649 0.94 3 4 5.2e-17 6.6e-14 52.1 0.0 1 45 663 708 663 708 0.98 4 4 4.3e-17 5.5e-14 52.4 0.1 1 43 715 758 715 760 0.96
Sequence Information
- Coding Sequence
- ATGGTGGGTCTTTTACGAACTGctgaacaattaaaaattaaaggattATGCGAAACAGCTGATACTGTCGATGATATATCAACAGAAAATGGTTCAACAGCAGCAACAATAACAGTGCCACAAGAAACAATAATCCAACAACAGCAAATTGTCACAGCAATTGGCaacaatttaatacaaaattctataaatcagcaacaaattaataataataataatattagtggCAATAATAGTGTTACTGGTcaacaatcatcatcatcatctttagTAATACCACAAGCTGCTGCAATATTAACTAACCCAACAACACAAAGAAAATCTAGAGTACGAAAACGTTCAAAATCACCAAATGAATcaataacaacaacagcaaataaTCAACAACATCAATCTATAATATCAACAACAAATCAATCATCATCATTTAATGGTAGTAcctcaataattaatttaaattctgcAATTGGTACAATAGTTTCAACTGGCGGTGGTAGTGTTGTTACaagttgtaataataataatagtaatagtagtatAATAGGATTATCATCAGGTATCGGTTCATCAAATAGTATTAGACAAAATTCTgatataaattctaataataataataataataatagtggtgATAATagtaaacaacaaaaacaattaattgtaaCAGCAATTgaatcaacatcatcatcaaataGTTCAGGTGGTAATAATAACGTTAAaccaacaaaaatttgtaaaacaGAAAATTCATCGTCAACAAATGATGGAAATGGTGTTGTTCAACAAGGTACAACAACAGCTATTGTAACACAAATTGTAGTAGCACGTGAAGGTAAAGATAGTAAAAATATGGCCAGTTTAGGAATGGGAATGAATGGTGGACTTTTAGGAGTACCAATGGGATTTTTAGATTTTGCACCAGAACCACCGGCACCATCAGCAACACCAGTTTCTGTTAGTGAACATGTTGATATGAATTGTGCACCAAGCAATGATACAAGAGATTTAACAAATCCCTCCGAATCACTTGATATAGACAATCATTTAGCACAGCATATAATACAACGTTTAGATCAATCACCAATGCATCAATTGCAgcataatcaacaacaacagaatCATCTTCAACAACAtctccaacaacaacaacaacagcttcatcatcagcaacaacaacaacaacagcagcaacagcATCATCAAAATAATACCGCCAATAATTCCACCGATGATTCAAATtcgaatttaatacaaaatattaaaagcgAAGTAATTGAAGTTAAACATCATCCACATTTGatacaacatcatcatcatcaacatcagcagcagcaacaacaacaacaaggacaatcacatcatcatcaacaacaacaacaacaacaacaacaacaacagcagcaacaacatcaAGTAATTACAAATGCAACTGTTATGGAAATTGATCCGGAAAATATAAAACATGAACCTGGTATGATAATAACACCAGAAATAGTTACAATGATGACTACCGGACATATGGACATTTACAATTCGGACACTAGTGAGGATTCTCTGATGATTGCGAATGGCAGCCCAAATGATAATAATGCTGAGCCGCATTATACGAATCTGGATCAACAGCACGACAATAGTAAGTTAAATGGCCCGAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAGAATATGAGCCTAACGAAAGCATCAGTCACCTATGGTATACCATCAACAACATTATGGCAGAGGGCACATCGGATGGGCATTGAGACACCAAAAAAAGAAGGTACAACAAAATCATGGAACGAAGAGGCTTTAAATAGTGCTTTGGAAGCATTACGTACTGGCCAGATATCAGCAAATAAAGCATCAAAAGCATATGGTATTCCGTCCtcaacattatataaaatagctAGACGAGAAGGTATACGATTAGCAGCACCATTTAATGCCGCACCAACAACATGGACACCTGAAGATTTAGAGCGTGCCCTTGAAGCAATACGAGCTGGCCATACATCAGTACAAAAAGCAAGCATGGAATTTGGTATACCAAcagGTACACTTTATGGACGATGTAAACGTGAAGGAATTGAATTGTCACGATCAAATCCTACACCATGGTCTGAGGATGCAATGAATGAAGCTTTAGTAGCTGTTAGAGTTGGTCATATGTCAATAAATCAGGCGGCAATACATTATAATCTTCCATATAGTTCATTATACGGTCGTTTTAAACGTGCTAAATATGAtacaaatacaacaacaactgCACCAGGTACAACATCAAGTAATACTAGCTTAAATACATCTGGTAATATTGAAATAATCGATCAAAGTCCAGAAAATTcggTTCATCTATTACAACAGTTCCAATATAGTCCCGGGCCAGCAACACCTCAACCCCATAACCAACAACATCATCAGcaacaaaatcaacaacatCATATTCAAATTCAACATcattcacaacaacaacaacatcatcacaATCAACAacatttacaacaacaacaagatgTTGTTACGTCGACCAGTCAAGttcaccaacaacaacaacaacaacaacaacagcaatctggtcaaattcaacaaatttatcatcatcataGCACACCAGAGAGAAgttga
- Protein Sequence
- MVGLLRTAEQLKIKGLCETADTVDDISTENGSTAATITVPQETIIQQQQIVTAIGNNLIQNSINQQQINNNNNISGNNSVTGQQSSSSSLVIPQAAAILTNPTTQRKSRVRKRSKSPNESITTTANNQQHQSIISTTNQSSSFNGSTSIINLNSAIGTIVSTGGGSVVTSCNNNNSNSSIIGLSSGIGSSNSIRQNSDINSNNNNNNNSGDNSKQQKQLIVTAIESTSSSNSSGGNNNVKPTKICKTENSSSTNDGNGVVQQGTTTAIVTQIVVAREGKDSKNMASLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVSVSEHVDMNCAPSNDTRDLTNPSESLDIDNHLAQHIIQRLDQSPMHQLQHNQQQQNHLQQHLQQQQQQLHHQQQQQQQQQQHHQNNTANNSTDDSNSNLIQNIKSEVIEVKHHPHLIQHHHHQHQQQQQQQQGQSHHHQQQQQQQQQQQQQQHQVITNATVMEIDPENIKHEPGMIITPEIVTMMTTGHMDIYNSDTSEDSLMIANGSPNDNNAEPHYTNLDQQHDNSKLNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGTTKSWNEEALNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASMEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRAKYDTNTTTTAPGTTSSNTSLNTSGNIEIIDQSPENSVHLLQQFQYSPGPATPQPHNQQHHQQQNQQHHIQIQHHSQQQQHHHNQQHLQQQQDVVTSTSQVHQQQQQQQQQQSGQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00643136; iTF_01297286;
- 90% Identity
- -
- 80% Identity
- -