Esim012467.1
Basic Information
- Insect
- Elegia similella
- Gene Symbol
- nfxl1
- Assembly
- GCA_947532085.1
- Location
- OX383948.1:17007030-17009504[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.41 1.3e+04 -2.9 1.4 14 19 133 138 133 138 0.86 2 18 0.032 1.1e+03 0.7 0.4 4 10 169 175 168 175 0.96 3 18 1.6e-07 0.005 17.6 15.9 3 19 186 202 185 202 0.95 4 18 3.4e-09 0.00011 22.9 13.1 1 19 237 255 237 255 0.93 5 18 0.43 1.4e+04 -3.0 1.9 6 10 280 284 279 284 0.87 6 18 3e-09 9.9e-05 23.1 15.3 1 19 290 308 290 308 0.99 7 18 1.8e-07 0.0058 17.5 18.6 3 19 345 361 344 361 0.93 8 18 2.1e-07 0.0067 17.3 17.0 1 18 395 412 395 413 0.97 9 18 2.5e-10 8.2e-06 26.6 13.0 1 19 422 440 422 440 0.99 10 18 9e-05 2.9 8.8 5.7 10 19 489 498 487 498 0.93 11 18 0.0019 62 4.6 8.6 1 11 508 517 508 518 0.96 12 18 0.19 6e+03 -1.8 3.3 14 18 547 551 547 552 0.85 13 18 0.27 8.7e+03 -2.3 0.3 7 12 567 572 567 572 0.81 14 18 1e-05 0.33 11.9 4.7 1 11 588 598 588 599 0.97 15 18 0.24 7.9e+03 -2.1 1.5 14 18 612 616 612 617 0.85 16 18 8.3e-05 2.7 8.9 15.3 4 18 630 645 628 646 0.85 17 18 1 3.2e+04 -6.5 3.4 9 13 652 656 652 656 0.71 18 18 2e-05 0.63 10.9 11.7 1 16 687 701 687 707 0.90
Sequence Information
- Coding Sequence
- ATGGCTCGGCGATACCGAGATGCCGCCGCGAAATTGCAGCAAAACGTGAAAAAACATTTGGAAGTGATGAAGGACCTTTCTTCGTCCGAAGATGAGGAGCCTTTCGAAAATTCCGTCCTCGAAGGAGTATTCCAGAGCTACCAGAGGGGTGGCGGAGATTCCCACTTGCTGAATCGAACAAGAAACCTCTTAGAAGAGGCCATAAGCGGCCGACCAATAACATGCCTAATTTGCATTGGAAGTATCAAAAGAGCCGATGCTATTTGGACCTGTGAGCACTGCCATTGTTATTTCCATCTTTCCTGCATCCAGAAATGGGCGAACGACAGTATTAGCCTAAGAGTTGAGGATCCGCTGGCGCCTATTTCAGTTTTTAAGCCCAATAAAGTCGAATGGGACTGCCCTAAATGCCGGCATTCGTATTCTAAGGAAGAAATACCGCGTAAGTACCGATGTTTTTGCGGTAAAACTGATGATCCTCCTCTTCATCCTTGGTTGATACCTCATTCCTGTGGAGAGGTTTGTGAAAAGAGGTTATCTTTAGGGGACAATTGTAAACATAAGTGTTTGCTGCTCTGCCACCCTGGTCCATGTCCGCCATGCCCACAGACAGTTAATGGAGTGTGCTACTGTGAGAAAGAAAGAAAGAGAGTCCGTTGCAGTGCTGCTAAGTGGTCTTGTGGCCAGCAGTGTAAGAAGACATTACTCTGTAACTCACACAAATGTGAAAATATTTGCCATGAAGGTGATTGCCCCCCATGTACGTATACAAGTGTCCAACAGTGTCAATGTGGCAGTGAGAAAGTCAAGAAACCATGCAATGATCCTATTTGGCAATGTGAGAAACCTTGCAACAAGTCCTACTCTTGTGGCTATCATAAATGTGAAAAAGTCTGTCATGGTGGGCCCTGCGGTGCTTGCCCCAACTCTGGAACTCGATCATGCCCATGTGGAGCTAATCAACGATTCGTACAATGCCCAGATGTTATGGAAACCTGTCTTGGAACATGTAATAAGAAGCATGAGAATTGCGAGCATACTTGTCCAGAAAAATGTCATAAGGGACCTTGCCCTCCTTGCCAAGTGCTGATACAAAAGAAGTGTTTCTGTTCTGCTCATGTCCGTTCTCTTCCATGCAGCAAAGATTATAAGTGTGACACGAAATGTAGAGGCATAAGACCTTGTGGAAAACATAGTTGTGCACGAAAATGCTGCAACGGTAATTGCCCACCATGTGAGAAATTATGCGACAAACCTCTACAGTGTGGCCGTCATAAATGCACTATGGTCTGCCATCGTGGCCCATGCTATCCTTGCCCTTTAGAATCTAAAGTCACTTGTAGATGTAAGGAAACTTACATAATTGTGCCTTGTGGCCGAGAAAAACACACAAAACCACCAAAATGCAGTCTGCCTTGCAAAAATAAATACAAATGTGGTCATATGGATGAGAATAGACATTTTTGTCATTTCGGAGATTGTCCGCCATGCAAAGCTATATGCTATAAGACATATCCGAAATGTGGTCATGAATGTAAAGCAACTTGCCACCAATTTGTGGCTGTAGTCTTTAAACAAGCAGCCAAGCCAGCTACACCATGGGAGATAGAGCCTCCAAAGACTAAGATAATGAATCTAGAGTGTCCTCCATGTGAGACATCTGTCTCAATGATTTGTTTCGGAGAACATGAGACGGAGCAACAAGCATGTCATACTGCTAAACGTAGATGCTGCGGCCGCCAGTGTGGCCGTCCTTTAGCTTGCGGAAATCACTCTTGCACCTTACTCTGTCATCTTTACTCTCCTGATCCTGGTTATCCGAATGTGCCTTATAATTGCAAGCCATGTGATAAGGAATGTCTCGTTCCCCGTCCAGTGAAATGTGCGCACAAATGTTACAAAAGACAATGTCATCCAGGACCATGTCCACCATGTGAGATTCTGGAACGAATTCCATGTCATTGCGGAGTCACAGAATTGTATTTACGTTGCAGAGAGTTAAGTAATGCTACAGAAGAAATGTTGTCTTGCAAACAGCAATGTCCTAAGAACTTGAGCTGTGGACATCGCTGCCGTAACAACTGTCATTCGGGAGAATGTGGTAAAGAACAGATGTGCTCCAAAAAGACCAAAATATATTGTGCTTGTGGAAATTTGAAGAAGGAGTTCCCCTGCAATGTTGTTAAAAATGGTGAAGCAAAGATACAATGCGATGATACTTGCGAAGCTAAGAATATTGCTACAAAATTAGAGAAAGAAAAAGAAGAATTGAGAAGAAAGGAGATGGAAGAAGAGAGGAACCGTAGAGAATTAGCAGAGTATGAGTGGAAACTTAGTGGTAAAAAGAAGAAATATAAAGAAAAGAAGGTGGTCACTAACATTGACAATAGAAACTGGTTGCAGAAGCACTGGATTCCTATTTTAAGTGTTTTGATTGCTGTTTCAGCTATAGTGTATTGTGTATTTTATGCATAG
- Protein Sequence
- MARRYRDAAAKLQQNVKKHLEVMKDLSSSEDEEPFENSVLEGVFQSYQRGGGDSHLLNRTRNLLEEAISGRPITCLICIGSIKRADAIWTCEHCHCYFHLSCIQKWANDSISLRVEDPLAPISVFKPNKVEWDCPKCRHSYSKEEIPRKYRCFCGKTDDPPLHPWLIPHSCGEVCEKRLSLGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKRVRCSAAKWSCGQQCKKTLLCNSHKCENICHEGDCPPCTYTSVQQCQCGSEKVKKPCNDPIWQCEKPCNKSYSCGYHKCEKVCHGGPCGACPNSGTRSCPCGANQRFVQCPDVMETCLGTCNKKHENCEHTCPEKCHKGPCPPCQVLIQKKCFCSAHVRSLPCSKDYKCDTKCRGIRPCGKHSCARKCCNGNCPPCEKLCDKPLQCGRHKCTMVCHRGPCYPCPLESKVTCRCKETYIIVPCGREKHTKPPKCSLPCKNKYKCGHMDENRHFCHFGDCPPCKAICYKTYPKCGHECKATCHQFVAVVFKQAAKPATPWEIEPPKTKIMNLECPPCETSVSMICFGEHETEQQACHTAKRRCCGRQCGRPLACGNHSCTLLCHLYSPDPGYPNVPYNCKPCDKECLVPRPVKCAHKCYKRQCHPGPCPPCEILERIPCHCGVTELYLRCRELSNATEEMLSCKQQCPKNLSCGHRCRNNCHSGECGKEQMCSKKTKIYCACGNLKKEFPCNVVKNGEAKIQCDDTCEAKNIATKLEKEKEELRRKEMEEERNRRELAEYEWKLSGKKKKYKEKKVVTNIDNRNWLQKHWIPILSVLIAVSAIVYCVFYA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00737154;
- 90% Identity
- iTF_01302988;
- 80% Identity
- -