Basic Information

Insect: Eilema griseolum
Gene Symbol: -
Assembly: GCA_963662185.1
Location: OY759253.1:18117227-18122808[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0048 0.62 12.0 0.7 1 21 65 85 65 86 0.96

2 16 0.01 1.4 11.0 0.4 2 23 158 179 157 179 0.97

3 16 0.014 1.8 10.6 0.1 1 23 183 205 183 205 0.95

4 16 0.51 65 5.7 0.1 1 10 210 219 210 233 0.84

5 16 0.0046 0.6 12.1 1.8 1 23 239 262 239 262 0.97

6 16 0.00057 0.073 15.0 1.9 1 23 269 292 269 292 0.98

7 16 9.1e-06 0.0012 20.6 1.0 3 23 301 321 299 321 0.97

8 16 3.7e-07 4.8e-05 25.0 2.5 1 23 327 349 327 349 0.98

9 16 0.0025 0.32 12.9 0.1 1 23 425 448 425 448 0.97

10 16 0.07 9.1 8.4 0.1 2 23 475 496 474 496 0.96

11 16 0.34 43 6.2 1.1 1 23 518 540 518 540 0.97

12 16 5.8e-06 0.00075 21.2 0.9 1 23 544 566 544 566 0.98

13 16 3.7 4.7e+02 3.0 0.3 1 15 571 585 571 594 0.74

14 16 0.32 42 6.3 0.6 1 23 600 623 600 623 0.89

15 16 0.00049 0.063 15.2 2.7 1 23 630 653 630 653 0.96

16 16 0.026 3.4 9.7 3.7 1 23 660 682 660 682 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0048	0.62	12.0	0.7	1	21	65	85	65	86	0.96
2	16	0.01	1.4	11.0	0.4	2	23	158	179	157	179	0.97
3	16	0.014	1.8	10.6	0.1	1	23	183	205	183	205	0.95
4	16	0.51	65	5.7	0.1	1	10	210	219	210	233	0.84
5	16	0.0046	0.6	12.1	1.8	1	23	239	262	239	262	0.97
6	16	0.00057	0.073	15.0	1.9	1	23	269	292	269	292	0.98
7	16	9.1e-06	0.0012	20.6	1.0	3	23	301	321	299	321	0.97
8	16	3.7e-07	4.8e-05	25.0	2.5	1	23	327	349	327	349	0.98
9	16	0.0025	0.32	12.9	0.1	1	23	425	448	425	448	0.97
10	16	0.07	9.1	8.4	0.1	2	23	475	496	474	496	0.96
11	16	0.34	43	6.2	1.1	1	23	518	540	518	540	0.97
12	16	5.8e-06	0.00075	21.2	0.9	1	23	544	566	544	566	0.98
13	16	3.7	4.7e+02	3.0	0.3	1	15	571	585	571	594	0.74
14	16	0.32	42	6.3	0.6	1	23	600	623	600	623	0.89
15	16	0.00049	0.063	15.2	2.7	1	23	630	653	630	653	0.96
16	16	0.026	3.4	9.7	3.7	1	23	660	682	660	682	0.97

Sequence Information

Coding Sequence: ATGTTATTTGAACGAAGAAAGCATGGACCCAGCAAAGCAGTTGTAGAATTAGAAGGTTCCCAACTAGAAAAGTTGTCCAAGCCGAAATATACGAGAAGTGCTAGAGCTGAGGCCAGAATTATCACCAAGAGAAATGCCACCGCTATACTCGAATGTTGGTCCCTTTGcccatttagatggcagacaaacagATTCAAATGTGCTTACTGTGAAGATAATTTCACTGACTGCTCTGAGCTCAGAGATCACGTCAGAATATGTTCCACACAACATACGTTCAATGATATTTACAGCAAATTCAAAGAAATGCCTTTAATCAATGTAGATGTTACAGAAGCTATTTGCTGTTATTGCTCCATGCCGATTACTGAAGTAGCCGACATGAGAAACCACGCTATTGAACATGGTTTTGAAATGGACCCAAATCACCCTGATGGTGTCCTACCCTTCTCTTTAGACAAACAATCCTGGAGATGTGTAATATGTTCGGAAAAATTCAATAACTTCTTGAAACTTTACGAGCACATGAACATTCATTACCAACATTACATTTGTGCTACCTGCGGAAAAGGATATATGACAGCGCCTAGATTGAGAAAGCACAACGAAGTCCATATTTCTGGATCATTCCCATGCAATGAATGTGGAAGAATATTCCTTATGAGAGCTGCAAGAGACTCGCATAAACAGTCAGCACATGCTAAAGGCCCTAGATATGAATGCCCACATTGTAACATGCGTTTTGATGGATATTATAGTAGAATGGAGCATATGAagaacgaacacagcgagcagGAAGTTTCTTACAAGTGTTCGCATTGTGAAATGTCTTTCAAAACCAGCGGAAAGCGGGCTATTCATGTCCGATCGGTACATTTTCCACCTAAATTAAACTTTGGGTGCAATTATTGTGAATGGCAATTCAAAACGAATTATGAGTTAAAGAGACACATGGTGCGGCATACTGGAGAAAAGAACTTCCATTGCTCGATATGTGGAAAGTCCTTTCCGAGAAATAAGGCTTTAACTACACATTTGAAGACTCACCAGGATGTGAATTGTTCAGCTAATATTTCGGAGGGGATAGGCGTTAGACGCGTTAGGAAGTTAAAAGAAAACGTTAGCGCACGGCAGCTGCGCAGGCGTCGAAGAGCGAACAACGAGCTCCCTGAAGAGTCTGATAAAAGAATCTCAAAGAccatgatgcggagaaacgctcTGATCCTTCTAGAATATTCCACAGCTTGGGCTTTTAGATGGTTTCATAGCGCGTTTTATTGCTCTTATTGTGAGGCGAAGTTCGTTGATGTGCCTCTACTAAGAGCACATGTAAAAGTTAATCATCTACACGAAATGCCTAGTAAAAGAATATTCTCGAAATTAACTGAAAATAATATGGTTAAAGTTGATATTGCGGAATTAAGTTGTAGAGTGTGTAACAGAGTTCTGAACGGTATTGACTCTTTAAAGGACCACTTACTGATACACGGAAAAaccttaaatattaattacagtGATGGTGTCCTACCCTTCAAATTAGACGACGAAGGCTATACTTGCCAGATTTGCTTTGCCCAGTTCCTAAGTTTCTCCAAAATGAATGAACATATGAACGAGCATTACCAAAATTATGTTTGTGACTCTTGTGGTAAGGCATTCGTTTCTAGATCACGGTTTCGGAAACACATCCAGTCTCATGAGAAAGGTAATTTTCCTTGCGGGGATTGCGATGAAGTTCTGGAAACAAGAGCAGCTAGAATGTGTCATAGATTGAAGGTCCATAAGAAAGGTGTGAGGTATGCTTGTCCAAGATGTCCGGATGTCTTCACAACATATCACACAAGAGCTAAACATTTAGTAGAAACACACGGGCAACAAAGAATGGAGTACTGTTGTAACGTTTGCGACAAATCATTTGAAACAAGCTCTAAACGTGCTAGCCATGTACGTTTAACTCATGCAAATGTTGAAAAGAGACATTATTGTGTTCAATGTTCAGCGTTCTTTCTCACTAAATCCAAACTGTTGCGACATTTGAGAACTCATAAAACGAAGTTTGATTGA
Protein Sequence: MLFERRKHGPSKAVVELEGSQLEKLSKPKYTRSARAEARIITKRNATAILECWSLCPFRWQTNRFKCAYCEDNFTDCSELRDHVRICSTQHTFNDIYSKFKEMPLINVDVTEAICCYCSMPITEVADMRNHAIEHGFEMDPNHPDGVLPFSLDKQSWRCVICSEKFNNFLKLYEHMNIHYQHYICATCGKGYMTAPRLRKHNEVHISGSFPCNECGRIFLMRAARDSHKQSAHAKGPRYECPHCNMRFDGYYSRMEHMKNEHSEQEVSYKCSHCEMSFKTSGKRAIHVRSVHFPPKLNFGCNYCEWQFKTNYELKRHMVRHTGEKNFHCSICGKSFPRNKALTTHLKTHQDVNCSANISEGIGVRRVRKLKENVSARQLRRRRRANNELPEESDKRISKTMMRRNALILLEYSTAWAFRWFHSAFYCSYCEAKFVDVPLLRAHVKVNHLHEMPSKRIFSKLTENNMVKVDIAELSCRVCNRVLNGIDSLKDHLLIHGKTLNINYSDGVLPFKLDDEGYTCQICFAQFLSFSKMNEHMNEHYQNYVCDSCGKAFVSRSRFRKHIQSHEKGNFPCGDCDEVLETRAARMCHRLKVHKKGVRYACPRCPDVFTTYHTRAKHLVETHGQQRMEYCCNVCDKSFETSSKRASHVRLTHANVEKRHYCVQCSAFFLTKSKLLRHLRTHKTKFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00822216;
90% Identity: iTF_01166968;
80% Identity: -