Egri006411.1
Basic Information
- Insect
- Eilema griseolum
- Gene Symbol
- -
- Assembly
- GCA_963662185.1
- Location
- OY759231.1:16908896-16909495[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-06 0.0013 19.8 0.0 12 37 4 29 1 35 0.88 2 2 3 7.3e+02 1.4 0.0 22 30 120 128 106 129 0.77
Sequence Information
- Coding Sequence
- ATGGAAAAGGTAAAAAGCAAGACTATGGGTGTCAATGAAGCCTCCAGAAATTACCAGATTCCCTCCAGAACCCTCAGAAGACACCTTTTAACAGGTAAATCAAAAGTCCCTCTTGGTCGCAACCCAGTCTTTTCAGAAGAGTATGAAAAAAAGTTAGTAGCTCATATAAGAAAATTAGAAAGAGTAGGGTTTGCACGAGACCGACGAGATGTAAAAGAAATAGCTTTTCAGTGGGCcacaaaacttaaaataaaacaccCATTTCCGGAAGAGTCTGGATTAGCGGGTAACGTCTGGTTTTCTGGATTTATGGCAAGAAATCCGGAACTAAGCCAAAGAAAGTCAGAAGGTTTATCCCTCGCACGAGCTTATGGAGTGAACAGAAAGGATGTTCCAGATTTTTTCGACTTGTTAGCCAAAATCTATCAAGAAAATAACTTCGCATCCCACCCTGAAGACATATATAATATGGACGAGTCAGGCATCCAGGTAAATAACAAACCAGGAAAAGTGATAGCAACCAAAGGTGCCAAGGATGTGTACACTCTCACAAGTTGTGAAAAGGGTGAAAATGTTAGTCATAGCGTGTTGCAATGCTGA
- Protein Sequence
- MEKVKSKTMGVNEASRNYQIPSRTLRRHLLTGKSKVPLGRNPVFSEEYEKKLVAHIRKLERVGFARDRRDVKEIAFQWATKLKIKHPFPEESGLAGNVWFSGFMARNPELSQRKSEGLSLARAYGVNRKDVPDFFDLLAKIYQENNFASHPEDIYNMDESGIQVNNKPGKVIATKGAKDVYTLTSCEKGENVSHSVLQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01020182; iTF_00288802;
- 90% Identity
- iTF_01020182; iTF_00288802;
- 80% Identity
- -