Carg013181.1
Basic Information
- Insect
- Celastrina argiolus
- Gene Symbol
- -
- Assembly
- GCA_905187575.1
- Location
- LR994578.1:6465803-6466477[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-10 2e-07 31.3 0.0 1 37 19 55 19 61 0.94 2 2 4.2 2.8e+03 -1.2 0.2 22 27 145 150 131 152 0.57
Sequence Information
- Coding Sequence
- ATGTTTCAGAAAATATCTCGGAAGTATAATAGAACAACACTGCGAGCATCATGGTCGCCAGAAGATTTGGAAGAAGCAATGGAAAAGGTAAAAAGCAAGACTATGGGTGTCAATGAAGCCTCCAGAAATTACCAGATTCCCTCCAGAACCCTCAGAAGACACCTTTTAACAGGTAAACCAAAAGTCCCTCTTGGTCGCAACCCAGTCTTTTCAGAAGAGTATGAAAAGAAGTTAGTAGCCCATATAAGAAAATTAGAAAGAGTAGGATTTGCACCAGACCGACGAGATGTAAAAGAAATAGCTTTTCAGTGGGCCACAAAACTTAAATTAAAACACCCATTTTCGGAAGAGTCTGGATTAGCGGGTAACGTCTGGTTTTCTGGATTGGCAAGAAATCCGGAACTAAGCCAAAGAAAGTCAGCAGGTTTATCCCTCGCACGAGCTTATGGAGTGTACAGAAAGGATGTTCAAGATTTTTTCGACTTGTTAGCCAAAATCTATCAAGAAAATGACTTCGCATCCCACCCTGAAGACATATATAATATGGACGAGTCAGGCATCCAGGTAAATAACAAACCAGGAAAAGTGATAGCAACCAAAGGTGTCAAGGATGTGTACACTCTCACAAGTTGTGAAAAGGGTGAAAATGTTAGTCATAGCGTGTGGCAATGCTAA
- Protein Sequence
- MFQKISRKYNRTTLRASWSPEDLEEAMEKVKSKTMGVNEASRNYQIPSRTLRRHLLTGKPKVPLGRNPVFSEEYEKKLVAHIRKLERVGFAPDRRDVKEIAFQWATKLKLKHPFSEESGLAGNVWFSGLARNPELSQRKSAGLSLARAYGVYRKDVQDFFDLLAKIYQENDFASHPEDIYNMDESGIQVNNKPGKVIATKGVKDVYTLTSCEKGENVSHSVWQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00637593;
- 90% Identity
- iTF_00637593;
- 80% Identity
- -