Egri022573.1
Basic Information
- Insect
- Eilema griseolum
- Gene Symbol
- -
- Assembly
- GCA_963662185.1
- Location
- OY759241.1:9519328-9520233[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-07 0.0001 23.4 0.0 16 44 28 56 15 57 0.82
Sequence Information
- Coding Sequence
- ATGGttaacaaatataaaagaaaaacctCTAATGCATCATGGGACGAGGCAGTTATGAAACTTGCTATGGAAGAAGCTAGCAAAACCTCAGTGAAAGGTGCGGCTAAGAAGTACGGTATAAACTTATCCACGTTGCAGCGGCACATCAAAAAAGGATGCACGAAGAAGAAATTTGGCAGGTACACAACTGTATTCACGGATCCTCAGGAACTCGAGCTTCTTGAATATGTGTTTCATATGGAAGGTTTGTTTTTTGGACTGACCAAGAAAGAATTCTTAGAACTCGTGTACCAATATGCCGAAAACAACAATATTCCACACCCATTCAAAAATGGAATGGCAGGTGAAGATTGGTACATTGGGTTTAAAGTACGACATCCTGATTTAAGTCTACGCCGTCCAGAACCGACGTCATTAGCACGCGCTAGGGGTTTTAACAAACCACAAGTACAGAGGTTTTTCGATTTGCTAGAGGGAGAGAtcgataaatataaaattgacgcGACGCGCATTTACAATGTTGACGAAACTGGAATTCAGACTAATAGCAACAAGCCGCCTAGAGTTCTTAGTAGATCAGGAAAAAAACAGGTTTGTGTAATATCTAGTGTCGAGCGTGGTAAACTCACAACAGTGGTTTGCTGTTGCAATGCAGCAGGTGCGTTTATACCCCCATTTTTAATCTTTGGGAGAAAGCAAATGGTGCCAAGACTTCTAGATGGCGCTCCACCTGGATCAGTCGCAAGCTGCACAGACAACGGCTGGATAAATGGCCCAACATTCTTAGACTGGCTTCGACATTTTGTGGCTATGACTAGGCCAACTAGTgagcaaaaaataattttagtaatgGACAATCACGTGTCACATAAATATTTAGAAGTCCTGAATTatgtaatattgtaa
- Protein Sequence
- MVNKYKRKTSNASWDEAVMKLAMEEASKTSVKGAAKKYGINLSTLQRHIKKGCTKKKFGRYTTVFTDPQELELLEYVFHMEGLFFGLTKKEFLELVYQYAENNNIPHPFKNGMAGEDWYIGFKVRHPDLSLRRPEPTSLARARGFNKPQVQRFFDLLEGEIDKYKIDATRIYNVDETGIQTNSNKPPRVLSRSGKKQVCVISSVERGKLTTVVCCCNAAGAFIPPFLIFGRKQMVPRLLDGAPPGSVASCTDNGWINGPTFLDWLRHFVAMTRPTSEQKIILVMDNHVSHKYLEVLNYVIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01028221;
- 90% Identity
- iTF_00637583;
- 80% Identity
- -