Egri038056.1
Basic Information
- Insect
- Eilema griseolum
- Gene Symbol
- -
- Assembly
- GCA_963662185.1
- Location
- OY759253.1:7395721-7396566[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-07 0.00011 23.3 0.0 16 44 28 56 15 57 0.82
Sequence Information
- Coding Sequence
- ATGGttaacaaatataaaagaaaaacctCTAATGCATCATGGGACGAGGCAGTTATGAAACTTGCTATGGAAGAAGCTAGCAAAACCTCAGTGAAAGGTGCGGCTACGAAGTACGGTATAAACTTATCCACGTTGCAGCGGCACATCAAAACAGGATGCCCGAAGAAGACACTTGGCAGGTACACAACTGTATTCACGGATCCTCAGGAACTCGAGCTTCTTGAATATGTGTTTCATATGAAAGGTTTGTTTTTGGGACTGACCAAGAAAGAATTCTTAGAACTCGTGTACCAATATGCCGAAAACAACAATATTCCACACCCATTCAAAAATGGAATGGCAGGTGAAGATTGGTACATTGGGTTTAAAGTACGACATCCTGATTTAAGTCTACGCCGTCCAGAACCGACGTCATTAGCACGCGCTAGGGGTTTTAACAAACCACAAGTACAGAGGTTTTTCGATTTGCTAGAGGGAGAGATCGATAAACATAAAATTGACGCGACGCGCATTTACAATGTTGACGAAACTGGAATTCAGACTAATAGCAACAAGCCGCCTAGAGTTCTTAGTAGATCAGGAAAAAAACAGGTTGGTGTGATATCTAGTGTCGAGCGTGGTAAACTCACAACAGTGGTTTGCTGTTGCAATGCAGCAGGTGCGTTTATACCCCCATTTTTAATCTTTGGGAGAAAGCGAATGGTGCCAAGACTTCTAGATGGCGCTCCACCTGGATCAGTCGCAAGCTGCACAGACAACGGCTGGATAAATGGCCCAACATTCTTAGACTGGCTTCGACATTTTGTGGCTATGACTAGGCCAactagtgaaaaaaaaaaattttag
- Protein Sequence
- MVNKYKRKTSNASWDEAVMKLAMEEASKTSVKGAATKYGINLSTLQRHIKTGCPKKTLGRYTTVFTDPQELELLEYVFHMKGLFLGLTKKEFLELVYQYAENNNIPHPFKNGMAGEDWYIGFKVRHPDLSLRRPEPTSLARARGFNKPQVQRFFDLLEGEIDKHKIDATRIYNVDETGIQTNSNKPPRVLSRSGKKQVGVISSVERGKLTTVVCCCNAAGAFIPPFLIFGRKRMVPRLLDGAPPGSVASCTDNGWINGPTFLDWLRHFVAMTRPTSEKKKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00819103;
- 90% Identity
- iTF_01026113; iTF_00667402; iTF_00637584; iTF_00850684; iTF_00761617;
- 80% Identity
- -