Egri005999.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- -
- Assembly
- GCA_017562165.1
- Location
- chr29:679-24881[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.078 2.4e+02 2.0 0.0 22 48 91 117 87 121 0.87 2 10 0.00099 3 8.1 0.1 23 48 121 146 118 149 0.89 3 10 0.0014 4.3 7.6 0.1 25 52 181 208 178 209 0.94 4 10 3.8 1.1e+04 -3.4 0.1 26 48 221 243 219 244 0.86 5 10 0.0064 19 5.5 0.3 21 48 276 303 268 308 0.89 6 10 0.00084 2.6 8.3 0.1 23 48 631 656 613 659 0.90 7 10 0.0014 4.3 7.6 0.1 25 52 691 718 688 719 0.94 8 10 2.4 7.2e+03 -2.8 0.0 26 48 731 753 728 755 0.85 9 10 0.0064 19 5.5 0.3 21 48 786 813 778 818 0.89 10 10 2.7 8.1e+03 -2.9 0.0 26 48 877 899 867 900 0.79
Sequence Information
- Coding Sequence
- ATGGAAGAAGTATACATTAAGgcggaaaatataaaaaatgagcCAGAAGATGATACTGAACATACAGTATCTGATATACGTCCTCCACATATGAAACAAGAACAGGAGATAAATGTGGACAGCGAAAATCAATTGTATTCTCAAAGTTACAATCATAACTTAAATACTGCTCAGCATAGTGAAGGACCGTATTTAAGAAAGAGTGAAAGCACAGAAAAATTAGAAACCCTAAATGCAGATCCAGAAAATTTTCCAATGCTAAATGAGCCTGAAGAACAAGTCACGTGCAAAGTTTGCTCGAAAACGTTCAAGGGACCATACAATTTGAAAATTCACATGAGGTACGTGCACCCAGCTGGTGAGCCGCACCCCTGCCCATTCTGCTACAAAACCTTCAAAGTAGAGATGCTTCTCCAGCGCCACCTGAAGTGGGCGCACCCTGGCGACGGCATGACCTACAAGTGCCAAGAGTGCCACAAGATCCTCCCCTCTCTCGACGGGTTCAAAACACACATGAAGAACGTTCACCTCTTCGACCGCGCCACCTGTGACCTCTGCAAACGGACTTTCAAAACAAAGAAATCTCTCGAACGCCATCTCAAAAACATTCACAATGGAAAACCCCCTGAAAAGATTGAAGAATACGTCCCAAAAGAACATACGTGTCAATTTTGCGAGCGATCTTTCAATAACAGTACGTCTCTGTTCTGGCATATAGAACGGTTCCACGCTCAGTTGCAGAAGTTACCGAATGATTTATGTATTATCTGTAACAAAGAATTTTCGGACTATGCTGCTTTGCATCGACACCTAACATCAGTGCATTCTTTAGAAACGGCGACCTGTAAAATATGTCAAAAGGAATTCAAATCTCCGATAAATCTGCAGAATCATATAAGAATCACGCACGCTCCCCCAGAAGCGACGCAGAAATGTGACATATGTCAAAAAACGTTCAAATGTCCGCTGCATTTGCGGATGCACGTTTTGGCAGTTCACGATGGTGGGGAGTATCCATtgaacaaacacaaaaaattagTTCACAACGGAAAAACCTGTCCAACGATGGAAGAAGTATACATTAAGtcggaaaatataaaaaatgagcCAGAAGATGATACTGAACATACAGTATCTGATATACGTCCTCCACATATGAAACAAGAACAGGAGATAAATGTGGACAGTGAAAATCAATTGTACTCTCAAAGTTACAATCATAACTTGAATACTGCTCAGCATAGTGAAGGACCGTATTTAAGAAAGAGTGAAAGCACAGAAAAATTAGAAACTCTAAATGCAGATCCAGAAAATTTTCCAACACTAAATGTAAAACCAGAAAATTTTCCAACGCCCATAGACAACACAAATACTTTTTCAGATCACAATCTGGGTACTGAgaatttttcacaaaacacagaaaattgtttgaaacaaaattatactGATACGTATTTGACTCAAAAAGGATTTGTCGAAGCGAATTTCCGTCAAATACAGACAGGAATACCACACAATTTAAATGATTCTCAGAGTGCAAACATTCCAGAAAAAGTATACGAGAATGGAAAGATAAATAGGCCAATGTGTGTTGAATGCGGAAAGTCTTTTAAGAACCGGTCAAATTTGAAAAATCATATTAAATTTGTGCATGCGGAAGACCAAACAGTGGAATGCAAAGAATGCATGCGTAGCTTCAAATCTATACTGTACCTACGGTCTCACATGAGCTCGGTCCACGCCAAGACGGAAGTAGTGTATTGCCCGCACTGCAACAaagcatttttaaataaaaagaagttAAGCAATCATATTTATTACACCCACAGGGAGCCTGAAGAACAAGTCACGTGCAAAGTTTGCTCGAAAACGTACGTGCACCCAGCTGGTGAGCCGCACCCCTGCCCATTCTGCTACAAAACCTTCAAAGTGGAGATGCTTCTCCAGCGCCACCTGAAGTGGGCGCACCCGGGCGACGGCATGACTTACAAGTGCCAAGAGTGCCACAAGATCCTCCCCTCTCTCGACGGGTTCAAAACACACATGAAGAACGTTCACCTCTTCGACCGCGCCACCTGTGACCTCTGCAAACGGACTTTCAAAACAAAGAAATCTCTCGAACGCCATCTCAAAAACATTCACAATGGAAAACCCCCTGAAAAGATTGAAGAATACGTCCCAAAAGAACAGACGTGTCAATTTTGCGAGCGATCTTTCAATAACAGTACGTCTCTGTTCTGGCATATAGAACGGTTCCACGCTCAGTTGCAGAAGTTACCGAATGATTTATGTATTATCTGTAACAAAGAATTTTCGGACTATGCTGCTTTGCATCGACACCTAACATCAGTGCATTCTTTAGAAACGGCGACCTGTAAAATATGTCAAAAGGAATTCAAATCTCCGATAAATCTGCAGAATCATATAAGAATCACGCATGCTCCCCCAGAAGCGACGCAGAAATGTGACATATGTCAAAAAACGTTCAAATGTCCGCTGCATTTGCGGATGCACGTTTTGGCAGTTCACGATGGCGGCGAGTATCCGTGTGACATCTGTCAAAAAACGTTCACGTCTACTAAATATTTGAACAACCACAAGAAATCGCATTCCGACATTAGAGACTTCCAATGCgacatttgtttgaaaatgtataaaaatataaatgcagtgaacaaacacaaaaaattagTTCACAACGGAGTGAAATGTACTATATGCAATATAAAACAGCCGAACATAGAAGACCATATGAGGAAGTGTCATCCTGACGTTGCTATAAATTTAACCATAGACACAGCAAAACCTAGTAAACCTGAATCCGTCAAACGCAAAAGAAGAACAGCGGATCCTAATAAACGTAAAAAGAAGATGGATGATGCAAAAAACATTGAGTCAGAGCATAATAATGCAAATATGCACTCTATAGAAAATATTAATGCGTCTTTGCATTCTGAAGAAAGTATTAATGCGTTTATGCACTTTGCAGAAAATGAGAATGCGTTTATGCACTTTGCTCAGAATATGAATACTATGAATTCTAgtgaagataataatattaatacggataattttaatgaaacgggatgtaaattaaatgatttaagTGTTGTTAAAAGTGAAATACAGGTTGATGAAATAGTGTGTAGAGtttgtgaaaagaaaattgatAGTTCAGAATACGATGAGCATGCGGCGAGTTGTGAGCGACCGCCGATACTGGAGTCTCACCGCGCGGTGCACGCGGCGCGCGTGCGTACCGAGCGCGCTGCGCTGCGAGAACGCGCGGCCGCAGTCCGCGCACGCGAACGGCTTCTCGCCGGTGTGCGTGCGGATGTGagagagagagagagagagatacacTTCGCTATGGGTGCGAAAGAGACTCACCACCCGAACGCCTTCTTCACGGGAACTGAGCCAGTCGGGCAGTCGCTCAACGACCGCCGCGGGAGAAGGACGTCGCTCGAGCGCTGTTGA
- Protein Sequence
- MEEVYIKAENIKNEPEDDTEHTVSDIRPPHMKQEQEINVDSENQLYSQSYNHNLNTAQHSEGPYLRKSESTEKLETLNADPENFPMLNEPEEQVTCKVCSKTFKGPYNLKIHMRYVHPAGEPHPCPFCYKTFKVEMLLQRHLKWAHPGDGMTYKCQECHKILPSLDGFKTHMKNVHLFDRATCDLCKRTFKTKKSLERHLKNIHNGKPPEKIEEYVPKEHTCQFCERSFNNSTSLFWHIERFHAQLQKLPNDLCIICNKEFSDYAALHRHLTSVHSLETATCKICQKEFKSPINLQNHIRITHAPPEATQKCDICQKTFKCPLHLRMHVLAVHDGGEYPLNKHKKLVHNGKTCPTMEEVYIKSENIKNEPEDDTEHTVSDIRPPHMKQEQEINVDSENQLYSQSYNHNLNTAQHSEGPYLRKSESTEKLETLNADPENFPTLNVKPENFPTPIDNTNTFSDHNLGTENFSQNTENCLKQNYTDTYLTQKGFVEANFRQIQTGIPHNLNDSQSANIPEKVYENGKINRPMCVECGKSFKNRSNLKNHIKFVHAEDQTVECKECMRSFKSILYLRSHMSSVHAKTEVVYCPHCNKAFLNKKKLSNHIYYTHREPEEQVTCKVCSKTYVHPAGEPHPCPFCYKTFKVEMLLQRHLKWAHPGDGMTYKCQECHKILPSLDGFKTHMKNVHLFDRATCDLCKRTFKTKKSLERHLKNIHNGKPPEKIEEYVPKEQTCQFCERSFNNSTSLFWHIERFHAQLQKLPNDLCIICNKEFSDYAALHRHLTSVHSLETATCKICQKEFKSPINLQNHIRITHAPPEATQKCDICQKTFKCPLHLRMHVLAVHDGGEYPCDICQKTFTSTKYLNNHKKSHSDIRDFQCDICLKMYKNINAVNKHKKLVHNGVKCTICNIKQPNIEDHMRKCHPDVAINLTIDTAKPSKPESVKRKRRTADPNKRKKKMDDAKNIESEHNNANMHSIENINASLHSEESINAFMHFAENENAFMHFAQNMNTMNSSEDNNINTDNFNETGCKLNDLSVVKSEIQVDEIVCRVCEKKIDSSEYDEHAASCERPPILESHRAVHAARVRTERAALRERAAAVRARERLLAGVRADVREREREIHFAMGAKETHHPNAFFTGTEPVGQSLNDRRGRRTSLERC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00635606;
- 90% Identity
- iTF_00635606;
- 80% Identity
- iTF_00635606;