Ecre023410.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- -
- Assembly
- GCA_963693475.1
- Location
- OY856351.1:8809076-8811766[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-07 4e-05 24.7 0.0 2 40 26 65 25 67 0.93
Sequence Information
- Coding Sequence
- ATGAATAATACTAAGCctaaaaacacaagaaaaaaaagaagattATTAGGATCAAGAGCATACAGAAATTATTCAGAGGAAATGTTAGAGTTAGCAATTGATATGGTAGAAAATAACAGGATGTCAAGTCGGGAGGCAGAAAAAAGGTTCGGAATTCCTCGACGGACGATattgaacaaaattaaaaaaaatcacttgAAACCAGCTGGAGGACAGAAGAAACTGACTGATGAAGaggaaaaaaaactgacaaacgTGTTGTTAGCTTCAGCAGATTACGGCAGCCCTATGACGAAAATGGATGTAAAAATGTTGGTCtataaatatttagaaaaaaattcaCGAACTGATTTGTTTGATGGCAAATTACCCAGTGATACGTGGGTGGAAGGATTTTTAAATAGACATCGTTTGAAATTGACCATCAGAACgactcaaaatataaaaaaggtaCGAGCTGAGAAAGGATTAGAAGAAATGGAGGAATTTTATGCTAATTTAAGTGAAACGCTAAAGGATGTTCCACCGATGAACATACTAAACTACGACGAGACTAACTTGTCCGACAACCCAGGCACTTCAAAATGTGTTTTTAGACGGGGCGTCAAGCATCCTGAACGGATTCTAAATAGCACAAAGAGTTGCGTTTCTATTATGTTCACTGCAATCGCAGCTGGGAAATGTCTGCCAACATATGTGGTTTATAAATCCTCAAATTTATATTCCGAGTGGCTTGAAGGAGGCCCACCTGGAACTAGATACAATTGTTCGAAAACAGGTTGGTTCGATACTGCTTCATTCGAAGATTACTTCAAAACTATAGTGACTTACTACAAAACTATTGGTGATAATTTGTCTTCTCACATAAATATTGAAGTTGTAGAGTTGTGTCAAAAACACAACATAAGGTTGGTATTTTTACCACCAAACTCCACTCACCTAACACAACCATTGGACGTAGCGTACTTTGGCCCACTAAAAAGAGAATGGAAAAAGATCCTGTTGGATTACAAATTGAAGAATCCAGGACAAACCACCTTGAATAAAAAACACTTTCCGAAACTTTTGGCTCAATTACtagaaaatatgaaacacaaGGAAAGCAATAACATAATAAGTGGCTTCAGAGCCACAGAAATATGGCCTGTAAATCCACgaaatgtttttaatagaatCCCAGAGTATTTCGACGATTCAGAATACGGAATTGATACAACTTTATTGGATTATCTGAAGGAATCAAGGGCTCCAAAGCCGATGCAAGTAAAAAGAAGTAATAAATTACGCACAGAACCCGGAAAATCAGTATGCGCTGACGATATCTCGACAATAAATAGTCTACTAACAGCACGAAAAAAGCAAACTACAAGAAAAAACACTAAGAAGATAATAATAAAGACTAACCAAGAAGAAGAGACAGAAGAGATCATTAGAGTTGTTAGAGGCAGAGCGTTGTTAGAGGCAGAAAATGGAATATACTTAGATGAAATTACAGGTGAAGTGATCGGGAGTGAGGAAGCGATTGATTACGATATTCCGTCGACCTCATCTGCGAACATCGGTTGGAAAAATAATGAGGaggaaacaataaaaactaaacaaGAAAGAGAGACAGAAGATATTATAGCGTCGTTGGAGACAGAAAATGGAGTATACTTAGATGAAATTACAGGTGAAGTGATAGGGAGTGAGGAAACGATTGATTGCGATATGCTGTTGACCTCATCTGGTATCATCGGAAAACCAGCACTACGACGCCTATTTACACCGGTGATCTATAATCCAACCAGACTTGATGCACTTAGTATCGAAGTTATCAACATGCATCTAGGTTCACCAGAGCGCGATACTAACGCTCAGCTAACCGACGACGTCTGTggattaagtaaaaaaataaaaagtgacagcCAGAATCGATCTTTCGTAGCTTATGGTGAAAATGATACTCCAAAGTGTTTAAGAAACATGACAAATAGTTCGTCTAAATCTAACGTTGTGATAACGTCAGATGTTAAAATAACCCCTACGGCGATGAAGgacatcaaaaaaaatattacattaggTACTGAAGTCATCGTAAAATCAGCTTTACAGATGAAAATTGTTACGAAGAAGATGGACAATGAAAatgtattaaatgaaaaaaataagataaaacgGAAAAATGTAACTCAAAGAAAAACAAAGGTAACGAAAAGAAAGAAATTGAGATCGTATTATTCTGAAACGAGTTCTGAATCGGATTTTCTAAATATTTCAAACACAGATGATTCTGATTGTGATACATTTGACGAATATTTATCAACATGCTTGCAAGAGATAGATAACAAGGAAAACTGTGAGCCAGAAAACATTCTTGCAACATTTGGATTAAGTGATATCAGCTATTTTACAAGCGatgtagatttaaaaaaagaagactGGGTTGTTGTAAAGTTTGCGACAAAAAAAAGCATAAAGCACTTTGTTGGTCGTGTTCTATATATGAAAAACAGTATTCCTACTGTAAAATTTGCAAGAAAAGTGAAAAATGCAAAAGATGGTAAAATGCGTTTCACGTACCCGAACGTAGAGGATGTGTGTGAAATTAATCGAGATGATATAGAAATAATATTGCCTCCGCCAAATATTTCTAGAAGAGGTCAAATAATGTTTGATATTACCTTTAATCCTTCCTATAACATgcaataa
- Protein Sequence
- MNNTKPKNTRKKRRLLGSRAYRNYSEEMLELAIDMVENNRMSSREAEKRFGIPRRTILNKIKKNHLKPAGGQKKLTDEEEKKLTNVLLASADYGSPMTKMDVKMLVYKYLEKNSRTDLFDGKLPSDTWVEGFLNRHRLKLTIRTTQNIKKVRAEKGLEEMEEFYANLSETLKDVPPMNILNYDETNLSDNPGTSKCVFRRGVKHPERILNSTKSCVSIMFTAIAAGKCLPTYVVYKSSNLYSEWLEGGPPGTRYNCSKTGWFDTASFEDYFKTIVTYYKTIGDNLSSHINIEVVELCQKHNIRLVFLPPNSTHLTQPLDVAYFGPLKREWKKILLDYKLKNPGQTTLNKKHFPKLLAQLLENMKHKESNNIISGFRATEIWPVNPRNVFNRIPEYFDDSEYGIDTTLLDYLKESRAPKPMQVKRSNKLRTEPGKSVCADDISTINSLLTARKKQTTRKNTKKIIIKTNQEEETEEIIRVVRGRALLEAENGIYLDEITGEVIGSEEAIDYDIPSTSSANIGWKNNEEETIKTKQERETEDIIASLETENGVYLDEITGEVIGSEETIDCDMLLTSSGIIGKPALRRLFTPVIYNPTRLDALSIEVINMHLGSPERDTNAQLTDDVCGLSKKIKSDSQNRSFVAYGENDTPKCLRNMTNSSSKSNVVITSDVKITPTAMKDIKKNITLGTEVIVKSALQMKIVTKKMDNENVLNEKNKIKRKNVTQRKTKVTKRKKLRSYYSETSSESDFLNISNTDDSDCDTFDEYLSTCLQEIDNKENCEPENILATFGLSDISYFTSDVDLKKEDWVVVKFATKKSIKHFVGRVLYMKNSIPTVKFARKVKNAKDGKMRFTYPNVEDVCEINRDDIEIILPPPNISRRGQIMFDITFNPSYNMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634374; iTF_00634375; iTF_00634379; iTF_00634380; iTF_00634381; iTF_00634382; iTF_01026085; iTF_00960873; iTF_00373994; iTF_00913548; iTF_00913547; iTF_00745621; iTF_00745622; iTF_00122326; iTF_00374038; iTF_01026106; iTF_01538686;
- 90% Identity
- iTF_00634374; iTF_00634375; iTF_00634379; iTF_00634380; iTF_00634381; iTF_00634382;
- 80% Identity
- -