Cpyr011168.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cosmia pyralina
Gene Symbol
-
Assembly
GCA_946251865.1
Location
CAMIUE010000362.1:868346-870968[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.3e-07 0.00018 22.5 0.0 5 40 2 38 1 40 0.93

Sequence Information

Coding Sequence
ATGTTAGAGTTAGCAGTTGACATGGTAGAAAATAACAGGATGTCAAGTCGGGAGGCAGAAAACAGGTTCGGGATTCCTCGACGGACGATATTgaacaaagttaaaaaaattcaCTTGAAACCAGCTGGAGGACAGAAGAAACTCACTGACGAAGAGGAAGAAAAATTAACAAACGTGTTGTTAGCTTCAGCAGATTACGGCAGCCCCATGACGAAAATGGATGTAAAAATGTTAATCTataaatatttagaaaaaaattcacGAACTGATTTGTTCGATGGCAAATTACCCAGTGATACGTGGGTAGAAGGATTTTTAAACAGACATCGTCCGAAATTGACCATCAGAACgactcaaaatataaaaaaggtaCGGGCTGAGAAAGGATTAGAAGAAATGGAGCAATTTTATGCTAATTTAAGTGAAACCCTAAATGATGTTCCACCGACGAACATACTTAACTACGACGAGACTAACTTGTCCGACAACCCAGGCACTTCAAAATGTGTTTTTAGAAGGGGCGTCAAGCATCCTGAAAGGATTTTAAATAGCACAAAGAGTTGCGTTTCCATCATGTTCACTGCAAGCGCAGCTGGGAAATGTCTGCCAACATATGTGGTTTATAAATCCTCAAATTTATATTCCGAGTGGCTTGAAGGAGGCCCACCTGGTACTAGATACAATTGTTCGAAATCAGGTTGGTTTGATACGGCTTCATTCGAAGATTACTTCAAAACTATAGTGGTTGAGTGGGCGAAACAAATTCCCGGGCCAAAAGTAGCCATTGGTGATAATTTGTCTTCCCACATAAATATTGAAGTTGTAGAGTTGTGTCAAAAACACAACATAAGGTTGGTATTTTTACCACCAAACTCCACTCACCTAACACAACCATTGGACGTAGCGTACTTTGGCCCACTGAAAAGAGAATGGAAAAAGATCCTGTTGGATTACAAATTGAAGAATCCAGGACAAACCACCTTGAATAAAAAACACTTTCCGAAACTTTTGGCTCAATTACTAGAAAATATGAAACATAAGGAAAGCAATAACATAATAAGTGGCTTCAGAGCCACAGGAATATGGCCTGTAAATCCACGAAATGTTTTTAAGAGAATCCCAGAGTATTTCGACGATTCAGAATACGGAATTGATACAACTTTATTGGATTATCTCAAAGAATCAAGGGCTCCTAAGCCAATGCAACGCGAAAAAAGCCATCTACTtataagaaaaaatacaaaGAAGGAAACAGTAAAGACTAACCAAGAAAGAGAGACAGAAGAAAATATAGCGTCATGGGATACTGAAAATGAGATATACTTAGATGTAATTACAGGTGAAGTGATAGGAAGGGAGGAAACGATTGATTACGATATGCCGTCGACCTCATCTGCAAACATCGGTTGGAAAAATACTAAGCAggaaacaataaaaactaacCAAGAAAGAGAGACAGAAGAAAATATAGCGTCGTGGGACACTGAAAATAAGATATACTTAGATGAAATTACTGGTGAAGTGATAGGAAGGGAGGAAACAATTGAATACGATATGCCGTCGACATCATCTGGTATCATCGGAAAACCAGCACTACGGCGCCAATTTTCACCGGTGATCTATAATCCAGCCAGACTTGATGCACTTAGTATCAAAATTATCAACATGCATTTAGGTTCACCAGCGCACGATACTAACGCTCAACTAACCGACGACGTCtgtgtattaaataaaaaaataaaaagtgacaGCCAGAATCGGCCTTTTGTAGCTTATGGTGAAAATGATACTCCAGGGTGTCTAAGATCAATGACGAATAGTTCATCTAAATCTAAAGTTATAATAACCTCAGATGTTAAAGTAACCCCTAAGGAAATGAAGGACatcaagaaaaatattaaattaggtactgaAGTCATCGGAAAATCAGCTTTACAGATGAAAATTGTTACGAAGAAAGTGGACACTAAAAatgcattaaataaaaaaaataaaagaaaacgggAAAATGTAACTACTCGAAGAAAAACAAAGGTTATGAAACGAAAGAAATTgagatcatattattatgaaacgaGTTCTGAATCGGATATTCTGAGTATTGCAAACACAGATGATTCTGATTATGATGCATTTGATGAATATTTATCAACATGTTTGCAAGAGATAGACAACAAGGAAAACTGTGAGCCCGAAAACATCACTGCAACATTTGGGTTCAGTGATATTAACTATTTTACAAGCGAtgtagatttaaaaaaagagGACTGGGTTGTTGTAAAATTTGCGACAAAAAAAAGCATAAAGCACTTTGTCGGTCGTGTTTTATATATGAAAAACAGTATTCCTACTGTAAAATTTGcaagaaaagtgaaaaatgcaaaagatggtaaaatgagTTTCACGTACCCGAACGTGGAGGATGTGTGTGAAGTTAATCGTGATGATGTAGAAATAGTATTACCTCCACCAAATATTTTTAGAAGAGGCCAAATAATGTTTGATATTACCTTTAATCCTTCCTATAACatgcaataa
Protein Sequence
MLELAVDMVENNRMSSREAENRFGIPRRTILNKVKKIHLKPAGGQKKLTDEEEEKLTNVLLASADYGSPMTKMDVKMLIYKYLEKNSRTDLFDGKLPSDTWVEGFLNRHRPKLTIRTTQNIKKVRAEKGLEEMEQFYANLSETLNDVPPTNILNYDETNLSDNPGTSKCVFRRGVKHPERILNSTKSCVSIMFTASAAGKCLPTYVVYKSSNLYSEWLEGGPPGTRYNCSKSGWFDTASFEDYFKTIVVEWAKQIPGPKVAIGDNLSSHINIEVVELCQKHNIRLVFLPPNSTHLTQPLDVAYFGPLKREWKKILLDYKLKNPGQTTLNKKHFPKLLAQLLENMKHKESNNIISGFRATGIWPVNPRNVFKRIPEYFDDSEYGIDTTLLDYLKESRAPKPMQREKSHLLIRKNTKKETVKTNQERETEENIASWDTENEIYLDVITGEVIGREETIDYDMPSTSSANIGWKNTKQETIKTNQERETEENIASWDTENKIYLDEITGEVIGREETIEYDMPSTSSGIIGKPALRRQFSPVIYNPARLDALSIKIINMHLGSPAHDTNAQLTDDVCVLNKKIKSDSQNRPFVAYGENDTPGCLRSMTNSSSKSKVIITSDVKVTPKEMKDIKKNIKLGTEVIGKSALQMKIVTKKVDTKNALNKKNKRKRENVTTRRKTKVMKRKKLRSYYYETSSESDILSIANTDDSDYDAFDEYLSTCLQEIDNKENCEPENITATFGFSDINYFTSDVDLKKEDWVVVKFATKKSIKHFVGRVLYMKNSIPTVKFARKVKNAKDGKMSFTYPNVEDVCEVNRDDVEIVLPPPNIFRRGQIMFDITFNPSYNMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00634378;
90% Identity
iTF_00745621;
80% Identity
-