Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: -
Assembly: GCA_932527285.1
Location: CAKOBM010000033.1:713083-717895[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.7e-05 0.8 10.1 0.1 21 52 271 302 266 303 0.94

2 12 0.0002 4.4 7.8 0.2 20 44 298 322 295 327 0.88

3 12 0.00093 20 5.7 0.1 21 50 367 396 363 401 0.88

4 12 0.0026 57 4.2 0.0 23 44 426 447 416 452 0.82

5 12 0.0018 38 4.8 0.1 23 48 491 516 487 521 0.89

6 12 0.00061 13 6.3 0.1 26 45 523 542 515 545 0.86

7 12 0.013 2.8e+02 2.0 0.0 21 48 584 611 581 614 0.88

8 12 0.33 7.3e+03 -2.5 0.0 24 42 683 701 680 708 0.72

9 12 0.29 6.2e+03 -2.3 0.0 17 44 703 730 697 733 0.77

10 12 0.00016 3.4 8.1 0.1 21 47 735 761 732 768 0.89

11 12 0.039 8.4e+02 0.5 0.1 26 52 768 794 762 795 0.87

12 12 0.00084 18 5.8 0.3 21 44 795 818 791 826 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.7e-05	0.8	10.1	0.1	21	52	271	302	266	303	0.94
2	12	0.0002	4.4	7.8	0.2	20	44	298	322	295	327	0.88
3	12	0.00093	20	5.7	0.1	21	50	367	396	363	401	0.88
4	12	0.0026	57	4.2	0.0	23	44	426	447	416	452	0.82
5	12	0.0018	38	4.8	0.1	23	48	491	516	487	521	0.89
6	12	0.00061	13	6.3	0.1	26	45	523	542	515	545	0.86
7	12	0.013	2.8e+02	2.0	0.0	21	48	584	611	581	614	0.88
8	12	0.33	7.3e+03	-2.5	0.0	24	42	683	701	680	708	0.72
9	12	0.29	6.2e+03	-2.3	0.0	17	44	703	730	697	733	0.77
10	12	0.00016	3.4	8.1	0.1	21	47	735	761	732	768	0.89
11	12	0.039	8.4e+02	0.5	0.1	26	52	768	794	762	795	0.87
12	12	0.00084	18	5.8	0.3	21	44	795	818	791	826	0.87

Sequence Information

Coding Sequence: ATGTCAGATTCTATGTTGTGTAGAGTATGTCTAGCAGATGATATCAAAATGCACAACATCAACACCACTCGGCTTCGGGAGATGTTTGAGAAGTTGACTGGAGAAAGGCTAAGTTATGGAGATGGTCGACCGGAGACTTTATGTTTCGTCTGTCATTCCCAGATACAGAAATCTTGGAAATTCTTCGAAATGGCTCAGAACTCGGAGAAGAGTTTAAATAATTTGATTGATTACGGAGTGCAGATAACTCGGCTATCTGTGGCTCTCATAGACAAAGTTAAAATACAAAATCTGTCGATAACAAACTACAAGGACACTATCGACTGCGCTATTTGTGCCAACGTGAAGGAAGAAACACAAGTCACAGTCAAAATGGAGTCAGATGATAGAATACAACTGGTCAGGGATATAGAAGATTTGGCCGCGGATAATTACGATGACAACTCTGAAATGGATCCACTAGAAGCTGTCAAAACTGCAACTGTCAAATCTGAAGCTGAAACCGTACTGTCAGTGGCGTCACATCTATGTGACATCTGTCAAAAACCCTTCTACACAAACAGCGGGTTGAACCGACACAAAAAAATATCTCACAAAAAGGTTGATACAAAACTGAAATGCAAAAGTTGTAGCGAAAAATTCTCCGATTCAAATCTTCTTAAAATACATATGAGATATCATAAAAAAAAGTCTAGTAATATTAATAATAGCTTAATAGTATCTGAGGGCGAAAAATTCGGTTGTATTCTATGCCAAAAGACATTTAAACAGAAAGGTCATTTAAAAACTCATATCATGGCCTTCCACACAGGTGAACGCCCGTATTCTTGCGAACTTTGCGACAAAAAGTTCGTCCAAAACAGTAATCTACGAACTCATATGCGAACCAACCATTCACAAAAACCATTCACCTGTTCCATATGTAACGGGGTTTGCGATAACGCTAATCATTTAAAAGAACATGTACTAAGCATACATGGTTTAGAAATAAAAAATGATTTACTCGTAGATGTAACTAGGCCGTTTGTATGCAATAGTTGTGGGAAAACGTTTTCAGCGAAATCTCACTTAAAATCTCACATGATGGCGATACATACAGGTGAACGCCCTTACGCGTGCAGTATGTGTGATAAATCATACACACAAAAAAGTCATCTAAGATTACATGCTAGATTAAGTCATGTAGTCGAGAAACCATTTGTCTGTGAAGACTGCGAAATGAGATTTGATGACGCAGAAAGTTTGAAAAAACACGCCAAAACACATCCTAAATCTCAAGAATTCACTTGTCCAACATGCAGTAAAGTTATTTATTCCGAAACTGGTTATAATAAACATTTACTAAGCCATATAGAGCCAGTTAAAGACAAAGTTATAAAAGTCAAGCCGTTTGGTTGTGTATTATGTAGCAAAAGATTTGGTTGGAAATCTCACCTAAAAACTCATATTATGGCAATTCACACGGGGCAGAGACCTTTTTCCTGCAATATGTGTGAGAAAACCTTCGTTCAGAAAAGTAATTTAAGATTACACGCGAAAGTAGCCCATTCTATACAAAACTCACTAAATTGTAATATATGCAAACGGGTATTTCGTAGCGAAGATAACCTCAAACAACATATGGTTATTCATAAAGAAGACATGAAGGATGAGAATAGTGATACAACTAAGCGATTTCCATGTTCTTTGTGTAATAAAAGTTTTAATTTCAAATCTCACTTAAAAACTCACATAATGGCATTACATACGGACGAACGACCGTTCGGATGTGATATTTGCGGTAAAAGTTTTGTACAAAAAAGCTACTTGAAATATCATATGAAGTTTTTACACCCCGGAGATGAAGCGACACAAATATTAATTGACACAGAAGCGGTTAAAACATTTTCTTGTAACACATGTGGGATTAAATTCACAAATAAAATAAGCTTCGAAAAACATAAAACTTTGCACACAAATCCTTTCGTATGTACAAAATGCGATGCGAAATTCAACTCGAAAACAGATTTTGATTTACACAACTTTAATTTACACGCTGAAGACTTACCAGTGTCTTGTGAGATTTGTAAATCACGTTTTATAGACCACACAGCATTACAAAAACATAGTACAACACATGTAGAGAACAAACTCACTTGCGATACATGTGGCCGGACATTTTTAACTCGCAGCGGTTTAAAACGACACGTAGTTATACACAGCGACGAGAAACCATTTTCCTGCAAAGTTTGCAAGAAATGCTTCAAGCAGGAACGTGTTCTAAAATCTCACATGCAGATACACACGGACACAAAGAAATACGGTTGTAGTATATGCGATAGACGGTTTCACCAACGAGGTAACTTGACCGGTCATATGAGAATACACACTAACGAGAAACCCACTGAGAAGCCGTTTACATGTAATATTTGTAATAAAAAGTTCAGATTACGGAGTTGTTTGAGGAACCACCAAATGGTGCATACCGGTGAACGACCGTATAAATGCGAACAGTGCGATAAAACGTTTTATAAAAAAGGAGAGTTGAAGACTCATGTCTCGAAAATTCATCCGTAA
Protein Sequence: MSDSMLCRVCLADDIKMHNINTTRLREMFEKLTGERLSYGDGRPETLCFVCHSQIQKSWKFFEMAQNSEKSLNNLIDYGVQITRLSVALIDKVKIQNLSITNYKDTIDCAICANVKEETQVTVKMESDDRIQLVRDIEDLAADNYDDNSEMDPLEAVKTATVKSEAETVLSVASHLCDICQKPFYTNSGLNRHKKISHKKVDTKLKCKSCSEKFSDSNLLKIHMRYHKKKSSNINNSLIVSEGEKFGCILCQKTFKQKGHLKTHIMAFHTGERPYSCELCDKKFVQNSNLRTHMRTNHSQKPFTCSICNGVCDNANHLKEHVLSIHGLEIKNDLLVDVTRPFVCNSCGKTFSAKSHLKSHMMAIHTGERPYACSMCDKSYTQKSHLRLHARLSHVVEKPFVCEDCEMRFDDAESLKKHAKTHPKSQEFTCPTCSKVIYSETGYNKHLLSHIEPVKDKVIKVKPFGCVLCSKRFGWKSHLKTHIMAIHTGQRPFSCNMCEKTFVQKSNLRLHAKVAHSIQNSLNCNICKRVFRSEDNLKQHMVIHKEDMKDENSDTTKRFPCSLCNKSFNFKSHLKTHIMALHTDERPFGCDICGKSFVQKSYLKYHMKFLHPGDEATQILIDTEAVKTFSCNTCGIKFTNKISFEKHKTLHTNPFVCTKCDAKFNSKTDFDLHNFNLHAEDLPVSCEICKSRFIDHTALQKHSTTHVENKLTCDTCGRTFLTRSGLKRHVVIHSDEKPFSCKVCKKCFKQERVLKSHMQIHTDTKKYGCSICDRRFHQRGNLTGHMRIHTNEKPTEKPFTCNICNKKFRLRSCLRNHQMVHTGERPYKCEQCDKTFYKKGELKTHVSKIHP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00632950;
90% Identity: iTF_00632950;
80% Identity: iTF_00632950;