Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: -
Assembly: GCA_932527285.1
Location: CAKOBM010000033.1:713083-717895[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 6.1e-05 0.0036 17.9 1.9 3 23 177 198 175 198 0.94

2 22 5.9e-05 0.0035 18.0 1.6 2 23 206 227 205 227 0.97

3 22 0.001 0.059 14.1 2.5 5 23 250 269 248 269 0.92

4 22 2.7e-08 1.6e-06 28.5 1.7 1 23 275 298 275 298 0.98

5 22 0.0055 0.33 11.8 1.2 1 23 303 326 303 326 0.96

6 22 1.2e-06 6.8e-05 23.4 1.4 1 23 342 365 342 365 0.95

7 22 4.5e-06 0.00027 21.5 2.2 1 23 371 394 371 394 0.96

8 22 1.5e-05 0.00089 19.9 0.2 1 23 400 422 400 422 0.98

9 22 0.0061 0.36 11.6 0.5 1 23 428 450 428 450 0.98

10 22 0.042 2.5 9.0 0.9 3 23 466 487 464 487 0.94

11 22 1.4e-06 8.3e-05 23.1 0.6 1 23 493 516 493 516 0.96

12 22 3.2e-06 0.00019 21.9 0.5 2 23 523 544 522 544 0.95

13 22 5.5e-06 0.00033 21.2 2.5 1 23 559 582 559 582 0.95

14 22 1.4e-06 8.3e-05 23.1 0.9 3 23 590 611 588 611 0.95

15 22 0.00039 0.023 15.4 2.2 1 23 629 651 629 651 0.95

16 22 0.06 3.5 8.5 1.7 1 20 655 674 655 678 0.88

17 22 0.013 0.76 10.6 1.7 2 23 685 706 684 706 0.96

18 22 0.00044 0.026 15.2 0.4 2 23 712 733 711 733 0.94

19 22 7.7e-05 0.0046 17.6 4.5 1 23 739 761 739 761 0.98

20 22 1.9e-05 0.0011 19.5 1.4 3 23 769 789 767 789 0.98

21 22 2.8e-05 0.0017 19.0 4.9 1 23 799 821 799 821 0.98

22 22 7.7e-06 0.00046 20.8 1.7 1 23 827 850 827 850 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	6.1e-05	0.0036	17.9	1.9	3	23	177	198	175	198	0.94
2	22	5.9e-05	0.0035	18.0	1.6	2	23	206	227	205	227	0.97
3	22	0.001	0.059	14.1	2.5	5	23	250	269	248	269	0.92
4	22	2.7e-08	1.6e-06	28.5	1.7	1	23	275	298	275	298	0.98
5	22	0.0055	0.33	11.8	1.2	1	23	303	326	303	326	0.96
6	22	1.2e-06	6.8e-05	23.4	1.4	1	23	342	365	342	365	0.95
7	22	4.5e-06	0.00027	21.5	2.2	1	23	371	394	371	394	0.96
8	22	1.5e-05	0.00089	19.9	0.2	1	23	400	422	400	422	0.98
9	22	0.0061	0.36	11.6	0.5	1	23	428	450	428	450	0.98
10	22	0.042	2.5	9.0	0.9	3	23	466	487	464	487	0.94
11	22	1.4e-06	8.3e-05	23.1	0.6	1	23	493	516	493	516	0.96
12	22	3.2e-06	0.00019	21.9	0.5	2	23	523	544	522	544	0.95
13	22	5.5e-06	0.00033	21.2	2.5	1	23	559	582	559	582	0.95
14	22	1.4e-06	8.3e-05	23.1	0.9	3	23	590	611	588	611	0.95
15	22	0.00039	0.023	15.4	2.2	1	23	629	651	629	651	0.95
16	22	0.06	3.5	8.5	1.7	1	20	655	674	655	678	0.88
17	22	0.013	0.76	10.6	1.7	2	23	685	706	684	706	0.96
18	22	0.00044	0.026	15.2	0.4	2	23	712	733	711	733	0.94
19	22	7.7e-05	0.0046	17.6	4.5	1	23	739	761	739	761	0.98
20	22	1.9e-05	0.0011	19.5	1.4	3	23	769	789	767	789	0.98
21	22	2.8e-05	0.0017	19.0	4.9	1	23	799	821	799	821	0.98
22	22	7.7e-06	0.00046	20.8	1.7	1	23	827	850	827	850	0.97

Sequence Information

Coding Sequence: ATGTCAGATTCTATGTTGTGTAGAGTATGTCTAGCAGATGATATCAAAATGCACAACATCAACACCACTCGGCTTCGGGAGATGTTTGAGAAGTTGACTGGAGAAAGGCTAAGTTATGGAGATGGTCGACCGGAGACTTTATGTTTCGTCTGTCATTCCCAGATACAGAAATCTTGGAAATTCTTCGAAATGGCTCAGAACTCGGAGAAGAGTTTAAATAATTTGATTGATTACGGAGTGCAGATAACTCGGCTATCTGTGGCTCTCATAGACAAAGTTAAAATACAAAATCTGTCGATAACAAACTACAAGGACACTATCGACTGCGCTATTTGTGCCAACGTGAAGGAAGAAACACAAGTCACAGTCAAAATGGAGTCAGATGATAGAATACAACTGGTCAGGGATATAGAAGATTTGGCCGCGGATAATTACGATGACAACTCTGAAATGGATCCACTAGAAGCTGTCAAAACTGCAACTGTCAAATCTGAAGCTGAAACCGTACTGTCAGTGGCGTCACATCTATGTGACATCTGTCAAAAACCCTTCTACACAAACAGCGGGTTGAACCGACACAAAAAAATATCTCACAAAAAGGTTGATACAAAACTGAAATGCAAAAGTTGTAGCGAAAAATTCTCCGATTCAAATCTTCTTAAAATACATATGAGATATCATAAAAAAAAGTCTAGTAATATTAATAATAGCTTAATAGTATCTGAGGGCGAAAAATTCGGTTGTATTCTATGCCAAAAGACATTTAAACAGAAAGGTCATTTAAAAACTCATATCATGGCCTTCCACACAGGTGAACGCCCGTATTCTTGCGAACTTTGCGACAAAAAGTTCGTCCAAAACAGTAATCTACGAACTCATATGCGAACCAACCATTCACAAAAACCATTCACCTGTTCCATATGTAACGGGGTTTGCGATAACGCTAATCATTTAAAAGAACATGTACTAAGCATACATGGTTTAGAAATAAAAAATGATTTACTCGTAGATGTAACTAGGCCGTTTGTATGCAATAGTTGTGGGAAAACGTTTTCAGCGAAATCTCACTTAAAATCTCACATGATGGCGATACATACAGGTGAACGCCCTTACGCGTGCAGTATGTGTGATAAATCATACACACAAAAAAGTCATCTAAGATTACATGCTAGATTAAGTCATGTAGTCGAGAAACCATTTGTCTGTGAAGACTGCGAAATGAGATTTGATGACGCAGAAAGTTTGAAAAAACACGCCAAAACACATCCTAAATCTCAAGAATTCACTTGTCCAACATGCAGTAAAGTTATTTATTCCGAAACTGGTTATAATAAACATTTACTAAGCCATATAGAGCCAGTTAAAGACAAAGTTATAAAAGTCAAGCCGTTTGGTTGTGTATTATGTAGCAAAAGATTTGGTTGGAAATCTCACCTAAAAACTCATATTATGGCAATTCACACGGGGCAGAGACCTTTTTCCTGCAATATGTGTGAGAAAACCTTCGTTCAGAAAAGTAATTTAAGATTACACGCGAAAGTAGCCCATTCTATACAAAACTCACTAAATTGTAATATATGCAAACGGGTATTTCGTAGCGAAGATAACCTCAAACAACATATGGTTATTCATAAAGAAGACATGAAGGATGAGAATAGTGATACAACTAAGCGATTTCCATGTTCTTTGTGTAATAAAAGTTTTAATTTCAAATCTCACTTAAAAACTCACATAATGGCATTACATACGGACGAACGACCGTTCGGATGTGATATTTGCGGTAAAAGTTTTGTACAAAAAAGCTACTTGAAATATCATATGAAGTTTTTACACCCCGGAGATGAAGCGACACAAATATTAATTGACACAGAAGCGGTTAAAACATTTTCTTGTAACACATGTGGGATTAAATTCACAAATAAAATAAGCTTCGAAAAACATAAAACTTTGCACACAAATCCTTTCGTATGTACAAAATGCGATGCGAAATTCAACTCGAAAACAGATTTTGATTTACACAACTTTAATTTACACGCTGAAGACTTACCAGTGTCTTGTGAGATTTGTAAATCACGTTTTATAGACCACACAGCATTACAAAAACATAGTACAACACATGTAGAGAACAAACTCACTTGCGATACATGTGGCCGGACATTTTTAACTCGCAGCGGTTTAAAACGACACGTAGTTATACACAGCGACGAGAAACCATTTTCCTGCAAAGTTTGCAAGAAATGCTTCAAGCAGGAACGTGTTCTAAAATCTCACATGCAGATACACACGGACACAAAGAAATACGGTTGTAGTATATGCGATAGACGGTTTCACCAACGAGGTAACTTGACCGGTCATATGAGAATACACACTAACGAGAAACCCACTGAGAAGCCGTTTACATGTAATATTTGTAATAAAAAGTTCAGATTACGGAGTTGTTTGAGGAACCACCAAATGGTGCATACCGGTGAACGACCGTATAAATGCGAACAGTGCGATAAAACGTTTTATAAAAAAGGAGAGTTGAAGACTCATGTCTCGAAAATTCATCCGTAA
Protein Sequence: MSDSMLCRVCLADDIKMHNINTTRLREMFEKLTGERLSYGDGRPETLCFVCHSQIQKSWKFFEMAQNSEKSLNNLIDYGVQITRLSVALIDKVKIQNLSITNYKDTIDCAICANVKEETQVTVKMESDDRIQLVRDIEDLAADNYDDNSEMDPLEAVKTATVKSEAETVLSVASHLCDICQKPFYTNSGLNRHKKISHKKVDTKLKCKSCSEKFSDSNLLKIHMRYHKKKSSNINNSLIVSEGEKFGCILCQKTFKQKGHLKTHIMAFHTGERPYSCELCDKKFVQNSNLRTHMRTNHSQKPFTCSICNGVCDNANHLKEHVLSIHGLEIKNDLLVDVTRPFVCNSCGKTFSAKSHLKSHMMAIHTGERPYACSMCDKSYTQKSHLRLHARLSHVVEKPFVCEDCEMRFDDAESLKKHAKTHPKSQEFTCPTCSKVIYSETGYNKHLLSHIEPVKDKVIKVKPFGCVLCSKRFGWKSHLKTHIMAIHTGQRPFSCNMCEKTFVQKSNLRLHAKVAHSIQNSLNCNICKRVFRSEDNLKQHMVIHKEDMKDENSDTTKRFPCSLCNKSFNFKSHLKTHIMALHTDERPFGCDICGKSFVQKSYLKYHMKFLHPGDEATQILIDTEAVKTFSCNTCGIKFTNKISFEKHKTLHTNPFVCTKCDAKFNSKTDFDLHNFNLHAEDLPVSCEICKSRFIDHTALQKHSTTHVENKLTCDTCGRTFLTRSGLKRHVVIHSDEKPFSCKVCKKCFKQERVLKSHMQIHTDTKKYGCSICDRRFHQRGNLTGHMRIHTNEKPTEKPFTCNICNKKFRLRSCLRNHQMVHTGERPYKCEQCDKTFYKKGELKTHVSKIHP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00633300;
90% Identity: iTF_00633300;
80% Identity: iTF_00633300;