Esil007985.1
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- -
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000038.1:656510-658135[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.4 82 4.2 0.0 2 23 19 41 18 41 0.84 2 14 0.041 2.5 9.0 3.5 2 23 62 83 61 84 0.94 3 14 0.0041 0.24 12.2 8.8 1 23 89 112 89 112 0.97 4 14 0.0063 0.38 11.6 1.0 1 23 117 140 117 140 0.93 5 14 0.00068 0.04 14.6 6.5 2 23 143 165 142 165 0.96 6 14 7.2 4.3e+02 2.0 1.0 2 21 172 191 171 192 0.91 7 14 0.017 1 10.2 1.8 1 23 248 271 248 271 0.97 8 14 0.0052 0.31 11.9 0.2 2 23 346 368 345 368 0.92 9 14 2.3e-05 0.0014 19.3 0.5 3 23 375 396 373 396 0.95 10 14 0.0014 0.08 13.7 4.6 2 23 401 423 400 423 0.95 11 14 0.0044 0.26 12.1 0.5 1 23 428 451 428 451 0.97 12 14 0.0012 0.069 13.9 6.2 1 23 455 478 455 478 0.97 13 14 0.034 2 9.3 1.7 3 23 486 506 485 506 0.96 14 14 1.9e-06 0.00011 22.7 1.3 1 23 512 534 512 534 0.99
Sequence Information
- Coding Sequence
- ATGAAAAAGCTAAGGGGAAACGGGCTATCTATTAATGTAGACGTATCAGAAGTTACGTGTGAACTTTGTGAGCAGCAATTCAAAAGCTTAGAAGTGATTGTAGAGCACCTGATAAACGAACATAACTTGTTCTACGACAAGGAAGTTTACAACGAAGTATTAGAATACAGATTGATCGATTTGCAATGCACACAATGCGACCTACGATTCGAAGCTTTCAGGCATTTAGTATCCCACGTGAATAAGCATCATCCTATGAACAATTTTGTTTGTCATCATTGCGGTCAAAAATTCAATAAAAAAAGACATATAACGTACCACATGAGTAGCTACCACCGGTCAGAAGGTTACGTTTGCAAGCAATGTGGCTTAGAATGCAAAGACCGTGTCGTACTACGAAAACATTCAGCTAAAGCGCATCTTACGCGATGTCACGTTTGCGGCAAACATTTCATTTATCATAACAAACTGCTCAAGCACATGAAACTCGAACATCCAAACGATAATGGCAAGACATGTGGTTTTTGTATGAAAGAGTTCCATTCGTCACTTGGCCTAAGACTGCACTTATCCAAATGCAAAGTGAGAATGATCTCACAAGAGGAAACACAAAGCGTTATCCCTGAGGGCAAAAACTCTGGTAACCAATCGAGAACACACGAGCAGATCGTGCGTATCCGCGAGAATATTCAATGTGTCCTGAACATGTCCACAGCTCTACCTTTCCGATTTAGAGTTAAATTCTCCTGTTTCTACTGTTCCACTAAGTACGATGATTACGAGGTGCTCAAACAGCATACGCAAACAGAACATCCTATATGCGACATCAAAAGTAAATCTATGAAAAAGTGTAAAGGGCAACGCACGTACGTCAGAGTCGATATAGCGGGACTTGCTTGTAAATTGTGTTCCGCACCCATGCCAGACTTGGAACACTTTATAGATCACGCCATCTCCGTTCATAACGCGGATTACGATAAGTCTGTCAGTATTGAGACGTGTTTTGAACCTTATCGTTTGATCAAAGGAAGCATCCCCTGTCTAGAGTGTCCCAAAGTTTTCCGATATTTAAACACTATGCTGAGGCATTTCAATTTAGAGCACAGCAATAATAACGTGATATGCGACTACTGCGGCCGTGGCTTCCGCAGTACTACCAATCTAAAGATGCACCTTCAGAATACTCACATCGGTTCCTGTGAATGTAAATTTTGCCATGCCAAGTTCAGGAACCAATCCGTTTTGGTGCGGCATATGGCTAAGAGTCACAACGAGAAGACTTTTAAATGCGCTAATTGTTCTGAGATGTTCGAGTCTGCGTACCAGCGGCAGACGCACTTGATCAAAGTCCATGGCATCGGGCACAAGTGCGAGTACTGCGGCAAGATGTTCACGAAGCATTCGTTCATGGACTCTCATGTCAGACGCACGCATTTGAAAGAGAAGAACGTTGCCTGCTCCGTTTGCAACGATAAGTTCTTCGACAATCATTTGCTGCGAATGCATATGGTGAAACACGATGGTGAACGGAAGTTCAAGTGTGAATTATGCGGTAAAGCGTTTCTTAGACAAAAAAACTTACGGACTCACATGGACACTCATAAGAAATACGGTTTTGTACAATAA
- Protein Sequence
- MKKLRGNGLSINVDVSEVTCELCEQQFKSLEVIVEHLINEHNLFYDKEVYNEVLEYRLIDLQCTQCDLRFEAFRHLVSHVNKHHPMNNFVCHHCGQKFNKKRHITYHMSSYHRSEGYVCKQCGLECKDRVVLRKHSAKAHLTRCHVCGKHFIYHNKLLKHMKLEHPNDNGKTCGFCMKEFHSSLGLRLHLSKCKVRMISQEETQSVIPEGKNSGNQSRTHEQIVRIRENIQCVLNMSTALPFRFRVKFSCFYCSTKYDDYEVLKQHTQTEHPICDIKSKSMKKCKGQRTYVRVDIAGLACKLCSAPMPDLEHFIDHAISVHNADYDKSVSIETCFEPYRLIKGSIPCLECPKVFRYLNTMLRHFNLEHSNNNVICDYCGRGFRSTTNLKMHLQNTHIGSCECKFCHAKFRNQSVLVRHMAKSHNEKTFKCANCSEMFESAYQRQTHLIKVHGIGHKCEYCGKMFTKHSFMDSHVRRTHLKEKNVACSVCNDKFFDNHLLRMHMVKHDGERKFKCELCGKAFLRQKNLRTHMDTHKKYGFVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00361892; iTF_01171748; iTF_00663382; iTF_01170877; iTF_00377406;
- 90% Identity
- -
- 80% Identity
- -