Esil007022.1
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- -
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000033.1:2058250-2060568[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 5.2e-06 0.00031 21.3 5.5 1 23 11 34 11 35 0.95 2 20 0.0067 0.4 11.5 1.6 2 23 41 63 40 63 0.94 3 20 6.4e-06 0.00038 21.0 0.3 2 23 72 94 72 94 0.97 4 20 1.4e-07 8.2e-06 26.2 1.5 2 23 103 125 102 125 0.95 5 20 1.7e-05 0.001 19.7 0.5 2 23 133 155 133 155 0.97 6 20 4.3e-05 0.0026 18.4 1.4 2 23 163 185 162 185 0.95 7 20 7.8e-07 4.7e-05 23.9 1.1 1 23 191 214 191 214 0.98 8 20 9.8e-05 0.0058 17.3 0.4 1 23 250 273 250 273 0.94 9 20 0.12 7.3 7.5 0.9 1 23 301 324 301 324 0.97 10 20 1.1 64 4.6 0.6 2 21 332 351 331 352 0.92 11 20 0.0052 0.31 11.8 0.8 2 23 361 383 361 383 0.95 12 20 0.0074 0.44 11.4 6.7 1 23 406 429 406 429 0.97 13 20 6.6e-05 0.0039 17.8 0.7 2 23 436 458 435 458 0.96 14 20 2e-05 0.0012 19.4 2.5 2 23 465 487 465 487 0.95 15 20 0.0076 0.45 11.3 2.2 1 23 493 516 493 516 0.97 16 20 0.15 8.8 7.3 6.7 2 23 524 546 524 546 0.95 17 20 0.01 0.62 10.9 0.0 1 23 553 576 553 576 0.97 18 20 0.034 2 9.3 0.9 1 23 583 606 583 606 0.91 19 20 0.017 1 10.2 2.7 3 23 621 642 620 642 0.91 20 20 0.19 11 7.0 0.8 1 12 692 703 692 706 0.90
Sequence Information
- Coding Sequence
- ATGGCGTTTATGTATCAAAATAACTTAGATTATTATTGTGATTACTGTGATCGCGCATTCACTAGGAAATACAATCTTCAGACTCATATCGAAAACTGCCACCATGACAATATTTCGTGCTTCTGTGATATTTGCGATTGTAAGTTTGGAAGTCCGGCCGGATTACAGTTGCACCTTTCGCGTGGACACAATAGCTTCGGTCAATCATCGCCTGAGTGCGATATTTGCGGCAGAATCTTCACCAGAAAACAAAACATAACATCCCACATGATCACTGTCCATCTACAAGGTATTGGACCCGAAATCAAATGCAAGATCTGCGATAAAGTTTTCACTTCTCAAAGGAACTTAAAAAGGCATTTGAACCAACTCCACAATCCCGCCATAAAGTATCCTACTTGCGATGAGTGTAAAAAGATTTTCAAAAGCAAAAACTCCTTAGTGGTTCATTTACGAGTGGTCCACAATGAAAATGTCAAGCTAATACGGTGTAATCTCTGCAACAAAGCTTACTCAAACACAAGAAACCTCAAAAGACACACTGAAATGTACCACGGAAAGAAGGAGGTGTATAGATGTGAAATTTGTCCTAAAATCTACACTTCAAACCAAAGTCTACGACGCCACGTGAGAACTAGACATGACCCTGATAATGAGGATCTGAAAAATGATAGCAAATGTATCGTAGAAGATAACGTTGAGTCTGACGATAACGACTCCAGTGACTTCAATAATGACATGAACGCATTCTTATGCGAAACTTGCAATAAACCGTTCGATGATGAACAACTGCTCAGACGACATATAAAGCAAGAACATTCGTTTGAGATATTTTATCAGTACTGCAAGAATTACTTGCAAAGACTAAATAATGAAGAACCGTTGATAATGCAAGTAGTTTTCAAATGCGAGTTTTGTTTCTCAGCTTTTCTAAGTGTATATGAGTTGAAAGATCACATGAAAGTCAACCACGATATCGAGTACTGCCTTACCACTTGCAATGTGTGCTTCAACAAGTTTTACAGTAAAGAAACTGTGATGGAACATAAAAAGATTTGCCTGCCGCCGCCAAACGTCAACTCTTGCAACTATTGCGATAAACTCTTCACGGATATCTCCAGTTTAGAGTTCCATACTAGAATATTCCATCCGCAATCTCAAATCACTGATTCCTGCGTTTCCTTGACTAAAGATGATCCAGCAGATATATGTTCTTACAAATGCCGGCACTGTGACCGGATGTATTACAGCGATCGCTCATTGCGACATCACATTAAGTTGAAACATACCACCATTGAGTCGGTTGAGTGCGAATACTGCTCCAAAGTCTGCAATAATAAATACTACCTCGCATCGCATATCAAGATTGTTCACAACAACGACACGTTAGCGAAATGCGACTACTGTGATAAACGGTTTAAATCTAAGAGGAATATTCGCAGACACATTGAGTACACGCATATGGGGATGCAAAGATACAAGTGTATCGAATGTGAGACTCTTTTCAAGGAGAAACGCAGTCTACGCAAGCATGTAAGGACTAAGCATCCTGACTCCGCGAGTTTCCCGCAATGCCACATCTGCCACAAAAGATTCGAGTCTGCCAAATCCTGCAAAATCCATCTAAAGTTAATCCACTCGTTTAACATGAACACGTATCCTTGTGATCTCTGTTCTGTATCGTTCGGCTCAGATGAAGCATTAAATATCCATCTAGCGACGAAACATTTAGCAGAAGATGAGATCTACAAGTGTGAAGTGTGCAATGTGGTTTTCAAAGGACCGCAAAAGTTCGTCGAACATAACGAAGTGTGCCACGCTAATTTCGCCACTTACCCTATGGAAAAAGTGACGCCTAGATGCATTATTTGTATGAAAGATTTTAGCACGCGTAAAACTTTGAAACGACACATAAAGAGATTCCATACTGACTTCGAAGTAGACGAACTCGCGAACTACGGATCATGGAAACGGACTTTTATTGTGGACTGCGATAGTTGCGTAAAGGGTTTTAGCGATGAATTCAATATCAACGTTTTCAATAAAGTCAAACACTTCCGCGACTCTCAAGTCTTCAAATGTGATATTTGCAAAACTTCTTTCAATTCTTTGGAGTTTGCTATCCAGAGGCAGAGGGTTACACAGGAAAAGTCAGAGATGGTTCTCAGTGAACTTTGCACCACACAGATGAGTGATGATGAAGCTTCTTGTTCTGGGTTCGGTTCCCTGCACGAGTATATGGAAGTGGAAAGTACGGGCGGCTCTAATCTTGAAGGGTTAGATGTGAATCAGAGTATTAAAACTGAGCCAGTATCATAG
- Protein Sequence
- MAFMYQNNLDYYCDYCDRAFTRKYNLQTHIENCHHDNISCFCDICDCKFGSPAGLQLHLSRGHNSFGQSSPECDICGRIFTRKQNITSHMITVHLQGIGPEIKCKICDKVFTSQRNLKRHLNQLHNPAIKYPTCDECKKIFKSKNSLVVHLRVVHNENVKLIRCNLCNKAYSNTRNLKRHTEMYHGKKEVYRCEICPKIYTSNQSLRRHVRTRHDPDNEDLKNDSKCIVEDNVESDDNDSSDFNNDMNAFLCETCNKPFDDEQLLRRHIKQEHSFEIFYQYCKNYLQRLNNEEPLIMQVVFKCEFCFSAFLSVYELKDHMKVNHDIEYCLTTCNVCFNKFYSKETVMEHKKICLPPPNVNSCNYCDKLFTDISSLEFHTRIFHPQSQITDSCVSLTKDDPADICSYKCRHCDRMYYSDRSLRHHIKLKHTTIESVECEYCSKVCNNKYYLASHIKIVHNNDTLAKCDYCDKRFKSKRNIRRHIEYTHMGMQRYKCIECETLFKEKRSLRKHVRTKHPDSASFPQCHICHKRFESAKSCKIHLKLIHSFNMNTYPCDLCSVSFGSDEALNIHLATKHLAEDEIYKCEVCNVVFKGPQKFVEHNEVCHANFATYPMEKVTPRCIICMKDFSTRKTLKRHIKRFHTDFEVDELANYGSWKRTFIVDCDSCVKGFSDEFNINVFNKVKHFRDSQVFKCDICKTSFNSLEFAIQRQRVTQEKSEMVLSELCTTQMSDDEASCSGFGSLHEYMEVESTGGSNLEGLDVNQSIKTEPVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00856883;
- 90% Identity
- iTF_00686563;
- 80% Identity
- iTF_00632945;