Basic Information

Insect: Earota dentata
Gene Symbol: Rreb1_1
Assembly: GCA_027574905.2
Location: JAODGB020026642.1:3333-8664[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 7.3e-05 0.0073 16.9 1.2 1 23 79 101 79 101 0.96

2 16 9.9e-05 0.0099 16.5 0.3 1 23 115 137 115 137 0.98

3 16 3.9e-06 0.00039 20.9 4.3 1 23 143 165 143 165 0.99

4 16 0.41 41 5.1 0.4 1 23 224 248 224 248 0.85

5 16 0.0095 0.95 10.3 4.3 2 23 254 276 254 276 0.97

6 16 2.2 2.2e+02 2.8 1.5 1 11 325 335 325 346 0.79

7 16 0.0031 0.31 11.8 0.2 1 23 470 492 470 492 0.98

8 16 0.00035 0.035 14.8 0.9 1 23 501 523 501 523 0.99

9 16 0.00057 0.057 14.1 3.1 1 23 529 552 529 552 0.97

10 16 0.0013 0.13 13.0 2.1 1 23 883 906 883 906 0.96

11 16 0.00034 0.034 14.8 0.4 2 23 1130 1151 1129 1151 0.97

12 16 0.086 8.6 7.2 6.3 1 23 1157 1180 1157 1180 0.97

13 16 0.0029 0.29 11.9 2.3 1 23 1205 1229 1205 1229 0.95

14 16 0.46 46 4.9 4.4 1 23 1284 1307 1284 1307 0.93

15 16 0.011 1.1 10.0 0.4 3 23 1355 1375 1353 1375 0.93

16 16 0.0051 0.51 11.1 5.9 1 23 1381 1403 1381 1403 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	7.3e-05	0.0073	16.9	1.2	1	23	79	101	79	101	0.96
2	16	9.9e-05	0.0099	16.5	0.3	1	23	115	137	115	137	0.98
3	16	3.9e-06	0.00039	20.9	4.3	1	23	143	165	143	165	0.99
4	16	0.41	41	5.1	0.4	1	23	224	248	224	248	0.85
5	16	0.0095	0.95	10.3	4.3	2	23	254	276	254	276	0.97
6	16	2.2	2.2e+02	2.8	1.5	1	11	325	335	325	346	0.79
7	16	0.0031	0.31	11.8	0.2	1	23	470	492	470	492	0.98
8	16	0.00035	0.035	14.8	0.9	1	23	501	523	501	523	0.99
9	16	0.00057	0.057	14.1	3.1	1	23	529	552	529	552	0.97
10	16	0.0013	0.13	13.0	2.1	1	23	883	906	883	906	0.96
11	16	0.00034	0.034	14.8	0.4	2	23	1130	1151	1129	1151	0.97
12	16	0.086	8.6	7.2	6.3	1	23	1157	1180	1157	1180	0.97
13	16	0.0029	0.29	11.9	2.3	1	23	1205	1229	1205	1229	0.95
14	16	0.46	46	4.9	4.4	1	23	1284	1307	1284	1307	0.93
15	16	0.011	1.1	10.0	0.4	3	23	1355	1375	1353	1375	0.93
16	16	0.0051	0.51	11.1	5.9	1	23	1381	1403	1381	1403	0.98

Sequence Information

Coding Sequence: ATGCAAGGTGTACTCTGCCTACCTCCAGGACAATTCGACCGCACCATACcaaataaaatcgatgAAATGGAAGTCACAGCTGAACCATTAACCAAAGAAATAAGCCAAAGCGATTCGGGAATCTTTTCCGCGACCGGAAATTCAACGTTCCCCAGCAGCGTGACCGACGAAAATAGAACGCAATCAGAGAATGAAACGGACAATCGATCCGATTGCAGCTCGCCGGATCGAAAATTTTTATGCCCCATTTGCGACCGAATGCTCACCTCGCAGCACGAGTTCACCCTGCACATACGCTCGCACAACAACGACGCCGAGGCGCCGCAGGACCCCGAAAAGGGCTACACCTGCAGGATATGCTCCAAGGTGCTGAGCTCCAGCTCTAGCCTGGATCGTCACGTGCTGGTGCACAGCGGCGAGCGACCCTTCACCTGCAAGTACTGCGGGGATACGTTCACCACCAACGGCAACATGCATCGGCACATGCGCACGCACAAAGCTGACAATTACGAATCGGACGGCAGTGACAGCACCGCCAGCAGCGGCTCCAAGAGCATCgaatacaacaacaacaacaagatcGACAAGtacgaaaacaaacgaaagcTCGATGCTGACGATGGCTTTCAATTGCGGAAGAAAGCGCACTTGGACACCGACGAGGAGACGTTCAAATGTCCAGTGTGCACGCGCGACGACTTTAACTCGAAGAAGTCGCTTGAGGTGCACTTGGAAGACAATCATCCAGATTATCCAGCCAAGTGTCACCAATGcaatcaaattttcaacaatcAGAAACGACTCAATTATCACAAAATGACTGTGCACGTCGATGACTCGAACGGGAAAACCAAGAATGTCGTCGTTGGGTTCAAACATATCGATTATGTTGATTTCACAAGCGAAAAGTTTCCACACATCGCGAGAATGGAATGCGAAAAGGTTTTTCATAAATCGGCGGTGGGGCCGCTTTACACATGCACGAAATGCTCAAGGGCGTTTCCCTGCGACAAATCCTTGGAGTTTCACATGAGGGAATGCGGTACACGGGAGACAATGCTGGACATTCCACGCGCAGCAGCCAGTATCAAGCGAGAGGAGTTTTTCCGCCACTTGGACCTGGAGGATAACTCTTTCGACAAACATCAAGCTTTGCGATCACTTCCTTCGTTCATGTTGAATCACGGCTTGACTCAGAGCAACCTCGAGGAAGCGATTAAGAATATGGATAATACCAAAGATTTAGCAGATATTCCATCCATTATTTCTTTGACTCAAGGCAATTTCCTTCAACAATTTCAAGGGAAGAATAATGAGATGACTCAATTGGAAAGTGAGAAAACCGAAGAGGAAGAATCTCAGGATTTGTTCGCGCAGGAGTTTAGAAAAATGAAGTTGCGAGGCGAGTTTCCATGTCGACTTTGCAATGCGGTATTTCCCAACCTGCGGGCTTTAAAAGGTCACAACCGTACTCATCTGAACAGCGCGGTCAATGGTACTTACAGGTGCAACATGTGCCCGCACTCGTCCTTAGATAAGGCTGCTCTCATCCGCCACATGCGCACCCACAACGGCGACCGACCTTACGAATGTTCTCTCTGCAACTACGCCTTCACCACGAAAGCGAATTGCGAACGACATCTGCGTAACCGTCACTCCAAGACCACTCGGGAAGATGTAAAGAAATCCATCATCTACCATCCATCCGAAGATCCTACCAACGAGGACATCAACAAACAGCTGGATAACAAAAAACTCAACATCAGCAGCAACTCTATCGACTCCAGCGAACTCCACTCAATTCGCAGCTCGACTCCAACTAGCATTCCTCCAGCGTTTCCAGATGTACACATCGCCAAGGACTACCCCACGTTGTTCCCGATGGTAGCTAAAATGCCAACCGTTAGTGAGCTTATTTCGGAGAACCGCAACAAAGAGTCGACCTGGAGTTCACAATTTGCAACCtcaacaccaaacaaaactCCGGCGCCGAGTATTCGCGTCAAGGATGTTAACGTTTTGAAGAAAATCCCTGAACAAGAGCAATTCTCTGATGGCGAGGACAACGAACCTATGGTACTGGACTTGAGCAAGAAGAAATCAGCCAAGGAACAAAGCAACGATCTGGATGAAGAACCTCCTTCCAAAAATCAAATGCCGAATTTCCCAATGACTGATATCTTGACGCAACAACTGCTGAAAAGTTCGCCGGCCGCGGATCCTGCTCTATCAGCCATTTTTGCCGCTCATTTGGCTTTCTACAGAAACTGCATACCAGGTTTTCCCCTGAATCCCTTGAATCCTCTGATGATCTCACCAATGCTTCCCGAACCTCCAATGCTATCTCCCGATACAAAGGACCGACTTCAACGTCAGCTCAGTGGCGGTGGCATAAAAAACATGTACTCTCCGAATTTTCCGCTCTTCAGCGATATGCAAATGGAATCTCAGACGCCCAAACCTGAAGAAATGAAACCACTTACTTTGAATGTAGACAGCTTCAATGAAAACATACAAATGAAAGGCAGTCCGGTGCTGCAACCCAAAGCAGAGCTGCTCCAATCACCGAACTCTGTCAAAATGGTTATCAAGAACGGCGTGTTAATGCCCAAGCAGAAGCAACGTCGTTATCGCACCGAAAGGCCCTTCTCGTGTGAACACTGCGCAGCTAGATTCACACTACGCTCTAACATGGAACGACATATTAAACAGCAACATCCGCAATTTTGGTCGCAACGCCAACGTTCGTCCATGGGAAATCCGGGTCGCAAACCGCATTTGCCAACAGCTTTGAAAAGCCCGATTTGTGAATTAAGTATTCCGACTTACGAGGCATCGAAATCACTTGATGTAGAAGATAGCAAAGCTTCTGTTGCGGAGAAGCTGAAATATGCCATATTATCGCAGCATTTGCGAGCCGCTCAAGAATCGCGTGAACATATGATGGAGAGGAAGGAAGACCCTGAGGATGATGCTGATGCGTTGGTTATTGATGAACCTGAAGAATTGCCCAAACCAGAGCCCATCAAGGCGGAAACACCCAAGTCCCGCATTTTGGAAGAGAAGTTGAAGGAGTTGCGCGATAGACAGTTGATGAAAGAGAAACAAATTGAAGTGAACAACAAGAAAGCCGAGGATACATCGGATTTGGTTCCTGTTTCGCGCTTGTTAGTGAATGCCTCCCAGCAACAGAATGAATTTAAGGAATATTTCCGTCCTGACCATGAGGAGAATGAGTTTATAAGTGAGGAAGATGAGGAAGGTTTGGTGGCAAGTGGGAGTACCAGCGAGGGAAATTCTGGAACTGACGAAAATAGAGAAAGTGATAACCACACAAATCAACCGGAAAAGAAGAAATCCGCTTATTCACTGGCTCCAAACCGTGTGAGCTGTCCATACTGCAGCCGCAAGTTTCCCTGGACATCATCCCTCCGTCGTCATATTCTCACCCACACCGGCCAAAAGCCCTTCAAGTGCAGCCACTGTCCACTGCTTTTCACCACCAAGTCGAACTGCGATCGCCACTTGCTCCGCAAGCATGGCAACACCGCCACCACCATCTCCAATGAGAACGCTAATAGTTTCATGATGCGCAATGTTCCCGAGCGACCCTTCAAATGCTCCAGCTGCCCATCCAGCACCTTCTCCACCTACTCCAACCTCAAAAAGCACATGATTTCGAAGCACGGCGCGCAGGATGACCGTCAGGGCTATGAGGCAGGCAGCTCCGAGGACGAGAAGAACAACAGCGATCACAAGTCCGACTGGGAGGCACAAATTTCTCACTCCAAGGTTGTGAGCTTCATTCCCCCCGACAACGCGCACCTCACCCAAAACTCCGACCTTCCCTTTAAATGCCACCTTTGCGACAACTCATTTTCGGAGCGTCAGGAATGCTTGGACCACATTCGGGACAAGCACGCTTCGGAATATGACCTGCTGATGAGCAAGAATGCGTTGGACGCCAACGCATCCACACCTGAAGAGGGTAATAATCACGATGACGAGGACAACGATGCGATTCGTGGCAAATTCCCCGATTATTCCAATCGCAAAGtgatttgtgcgttttgcatgCGGCGCTTTTGGTCAGCGGAGGATCTACGACGACACATGCGgacgcacaccggcgagcggcCGTTCAGCTGCGACATCTGCCGGCGGCGCTTTACATTGAAGCACAGCATGCTGCGTCATCGAAAGAAGCACAATATTGGATTCGGCCAGCAGGATAATGCGCAGAGCGACGAGGAGATGGCGAGTGACTCGAAGCCAATTGAGTCAAACGCTGTTGCGACCTGCGAGTCGTccgacaaggagaaggaggactCAGATGTAAATGAAGGTAGCGATTTGATAAGCAATTTATTAGGCATTAGGGATCGTTCGCTGATTGAACAAGTCCTGACTGGATCAGCGGACGATGCTGCGAAATTATTAGGTGTCGGCAAGGAATAG
Protein Sequence: MQGVLCLPPGQFDRTIPNKIDEMEVTAEPLTKEISQSDSGIFSATGNSTFPSSVTDENRTQSENETDNRSDCSSPDRKFLCPICDRMLTSQHEFTLHIRSHNNDAEAPQDPEKGYTCRICSKVLSSSSSLDRHVLVHSGERPFTCKYCGDTFTTNGNMHRHMRTHKADNYESDGSDSTASSGSKSIEYNNNNKIDKYENKRKLDADDGFQLRKKAHLDTDEETFKCPVCTRDDFNSKKSLEVHLEDNHPDYPAKCHQCNQIFNNQKRLNYHKMTVHVDDSNGKTKNVVVGFKHIDYVDFTSEKFPHIARMECEKVFHKSAVGPLYTCTKCSRAFPCDKSLEFHMRECGTRETMLDIPRAAASIKREEFFRHLDLEDNSFDKHQALRSLPSFMLNHGLTQSNLEEAIKNMDNTKDLADIPSIISLTQGNFLQQFQGKNNEMTQLESEKTEEEESQDLFAQEFRKMKLRGEFPCRLCNAVFPNLRALKGHNRTHLNSAVNGTYRCNMCPHSSLDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHSKTTREDVKKSIIYHPSEDPTNEDINKQLDNKKLNISSNSIDSSELHSIRSSTPTSIPPAFPDVHIAKDYPTLFPMVAKMPTVSELISENRNKESTWSSQFATSTPNKTPAPSIRVKDVNVLKKIPEQEQFSDGEDNEPMVLDLSKKKSAKEQSNDLDEEPPSKNQMPNFPMTDILTQQLLKSSPAADPALSAIFAAHLAFYRNCIPGFPLNPLNPLMISPMLPEPPMLSPDTKDRLQRQLSGGGIKNMYSPNFPLFSDMQMESQTPKPEEMKPLTLNVDSFNENIQMKGSPVLQPKAELLQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCAARFTLRSNMERHIKQQHPQFWSQRQRSSMGNPGRKPHLPTALKSPICELSIPTYEASKSLDVEDSKASVAEKLKYAILSQHLRAAQESREHMMERKEDPEDDADALVIDEPEELPKPEPIKAETPKSRILEEKLKELRDRQLMKEKQIEVNNKKAEDTSDLVPVSRLLVNASQQQNEFKEYFRPDHEENEFISEEDEEGLVASGSTSEGNSGTDENRESDNHTNQPEKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNTATTISNENANSFMMRNVPERPFKCSSCPSSTFSTYSNLKKHMISKHGAQDDRQGYEAGSSEDEKNNSDHKSDWEAQISHSKVVSFIPPDNAHLTQNSDLPFKCHLCDNSFSERQECLDHIRDKHASEYDLLMSKNALDANASTPEEGNNHDDEDNDAIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNIGFGQQDNAQSDEEMASDSKPIESNAVATCESSDKEKEDSDVNEGSDLISNLLGIRDRSLIEQVLTGSADDAAKLLGVGKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00022349; iTF_00904305; iTF_00631666; iTF_00632291;
90% Identity: -
80% Identity: -