Basic Information

Insect: Ecitomorpha arachnoides
Gene Symbol: RREB1
Assembly: GCA_027574945.2
Location: JAODGD020027500.1:7193-12426[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.8e-05 0.0089 16.9 1.2 1 23 79 101 79 101 0.96

2 16 7.9e-05 0.012 16.5 0.3 1 23 115 137 115 137 0.98

3 16 1.6e-05 0.0024 18.7 4.4 1 23 143 165 143 165 0.99

4 16 0.25 39 5.5 0.3 1 23 223 247 223 247 0.85

5 16 0.017 2.6 9.2 4.5 2 23 253 275 253 275 0.97

6 16 1.3 2e+02 3.3 1.4 1 11 324 334 324 345 0.79

7 16 0.018 2.7 9.1 0.3 1 23 468 490 468 490 0.98

8 16 0.00028 0.043 14.8 0.9 1 23 499 521 499 521 0.99

9 16 0.00045 0.069 14.1 3.1 1 23 527 550 527 550 0.97

10 16 0.001 0.16 13.0 2.1 1 23 883 906 883 906 0.96

11 16 0.00027 0.041 14.8 0.4 2 23 1126 1147 1125 1147 0.97

12 16 0.068 11 7.3 6.3 1 23 1153 1176 1153 1176 0.97

13 16 0.0023 0.35 11.9 2.3 1 23 1201 1225 1201 1225 0.95

14 16 0.29 45 5.3 1.3 1 23 1280 1303 1280 1303 0.89

15 16 0.009 1.4 10.0 0.4 3 23 1351 1371 1349 1371 0.93

16 16 0.0041 0.63 11.1 5.9 1 23 1377 1399 1377 1399 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.8e-05	0.0089	16.9	1.2	1	23	79	101	79	101	0.96
2	16	7.9e-05	0.012	16.5	0.3	1	23	115	137	115	137	0.98
3	16	1.6e-05	0.0024	18.7	4.4	1	23	143	165	143	165	0.99
4	16	0.25	39	5.5	0.3	1	23	223	247	223	247	0.85
5	16	0.017	2.6	9.2	4.5	2	23	253	275	253	275	0.97
6	16	1.3	2e+02	3.3	1.4	1	11	324	334	324	345	0.79
7	16	0.018	2.7	9.1	0.3	1	23	468	490	468	490	0.98
8	16	0.00028	0.043	14.8	0.9	1	23	499	521	499	521	0.99
9	16	0.00045	0.069	14.1	3.1	1	23	527	550	527	550	0.97
10	16	0.001	0.16	13.0	2.1	1	23	883	906	883	906	0.96
11	16	0.00027	0.041	14.8	0.4	2	23	1126	1147	1125	1147	0.97
12	16	0.068	11	7.3	6.3	1	23	1153	1176	1153	1176	0.97
13	16	0.0023	0.35	11.9	2.3	1	23	1201	1225	1201	1225	0.95
14	16	0.29	45	5.3	1.3	1	23	1280	1303	1280	1303	0.89
15	16	0.009	1.4	10.0	0.4	3	23	1351	1371	1349	1371	0.93
16	16	0.0041	0.63	11.1	5.9	1	23	1377	1399	1377	1399	0.98

Sequence Information

Coding Sequence: ATGCAAGGTGTACTCTGCCCACCTCCAGGACAATTCGACCGCACCGCGCCAAATAAAGTCGATGAAATGGAAGTCACAGCCGAACCATTAACCAAAGAAACAAGCCAAAGCGACTCGGGAATCTTTTCTGCAACCGGAAATTCAACCTTCCCTAGCAGCGTGACTGACGAAAATAGAACGCAGTCGGAAAATGAAACGGACAATCGATCCGACTGCAGTTCGCCTGATCGAAAATTCCTGTGTCCCATTTGCGATCGAATGCTCACGTCGCAGCACGAATTCACGTTGCACATACGATCGCACAACAACGACGCCGAAGCGCCGCAGGACCCCGAGAAAGGATATACCTGCAGAATATGCTCCAAGGTGTTGAGCTCCAGCTCTAGCCTGGACCGCCACGTGCTGGTACACAGCGGAGAACGTCCGTTCACGTGCAAATTCTGCGGAGACACCTTCACCACCAACGGCAACATGCATCGCCACATGCGCACGCACAAAGATAATTACGAATCGGACGGCAGCGACAGCACGGTCTCCAGTGGATCTAAAAGCATCGAATACAATAATAACAAAGTTGACAAATACGACAACAAGCGCAAGATCAGCGCAGACGATGATGGCATGCAGCTGAGGAAGAAGCCACACCTAGACATCGACGACGAAACATACAAATGTCCGGTGTGCAGTCGCGACGACTTCAATTCGAAGAAGTCTCTGGAGGTGCATCTGGAAGACAACCATCCCGACTATCCGGCAAAGTGCCACCAGTGCAACCAGATTTTTAACAATCAAAAACGCCTGAACTACCACAAATCAACGGTGCACGCCGATGATTCAAACGGAAAATCCAAAAACGTCGTCGTCGGGTTCAAGCACATCGATTATGTCGATTTCACTAGCGAAAAGTTTCCGCACATTGCGCGGCATGAATGCGAGAAGGTTTTCCATAAATCCGCGGTGGGTCCGAAGTACACCTGCAATAAGTGCTCGAGGGCGTTTCCCTGCGACAAATCCTTGGAGTTTCACATGCGCGAATGTGGCAGTCGCGAGAAACATCTTGAAATTCCACGCGCCGCGTCAAGCATTAAGCGCGAGGAGTTTTTCCGCCACCTTGACTTGGAAGACAACTCTTTCGACAAGCACCAAGCATTGAAGACGCTTCCGTTCATGTTGAACCACGGCTTTACCAAAAACAACATCGAAGAAGCAATCAAATCCATGGATCATGCCAAAGACTTAGCCGATATTCCATCTATCATTTCATTGACTCACGGTAGTTTTCTGCAACAGCTTCAGGGCAAGAACAATGACATTTCGCAAATGGAGAACGAAAAGACCGAAGAGGAAGAGTCCCAAGACGTATTTGCGCAAGAGTTTCGAAAGATGAAGTTGCGGGGCGAGTTTCCGTGCCGACTTTGCACATCGGTGTTTCCTAATTTACGGGCACTCAAAGGTCACAACCGCACTCACTTAAACAGCGCCCTCAATGGTACTTACAGGTGCAACATGTGCCCACATTCGTCATTAGACAAAGCTGCTCTAATTCGCCACATGCGCACGCATAACGGCGATCGGCCTTACGAATGCTCGCTCTGCAATTACGCTTTCACAACGAAAGCTAATTGCGAGCGACATCTTCGCAATCGCCACTCGAAGAATACGCGCGAAGAAGTCAAGAAAGCCATAATTTATCATCCTTCGGAAGACCCCACCAACGAAGATGTCAATAAGCATGCCATAGATGCCAAGAAGTTGAACATCAGCAACAACTCCATCGACTCTACCGAGATGAACTCAATTCGTAGCTCCACGCCGAATAGCATTCCTCCGGCGTTTCCAGATGTGCACATTCCGAAGGACTACCCGAGTCTATTCCCATTGGTGCCCAAAATCCCAACCGTAAACGAGCTTATATCCGAAAATCGTAGCAAGGATTCCAACTGGCCCTCGCAGTTTGCTACGTCGACTCCTAACAAACCAAGCATTCGCGTTAAGGATGTTAATgttttaaagaaaattcCAGAACAGGAACAATTTTCAGATGAAGAGGATAGCGAGCCGATGGCGCTAGATCTCAGCAAAAAGAAATCCGCCAAGGAGCATAATACTTCCAACGGTACCGATATGGATACTACTGATTCAACTCCCAAAAATCAAATTTCGAATTTTCCTATGACAGATATCTTGACGCAGCAACTTCTGAAAAGTTCCCCGGCAGCCGATCCAGCATTATCGGCGATTTTTGCCGCGCACCTTGCGTTGTACAGAAACTACATGCCTGGCTTCCCGCTAACTCCACTGAATCCGTTAATGATGCCTTCTATGCTTCCTGAACCGCCCATGTCCCCTGAAACTAAAGATAGATTTCAACGCCAGCTTAGTGGCGGAGGTATTAAAAACATGTACCCACCTAACTATCCATTGTTCAGCGATATGAAGATTGAATCTCAGCCTCCGAAGAACGACGAGATGAAACCGCTCACCTTGAACGTAGACAACTTGATGGACAATGGTCATATGAAAAGCAGCCCAGTTCTGCAACAAAAATCGGAGCTCCTTCAGTCGCCTAACTCCGTGAAGATGGTTATCAAGAACGGAGTGTTGATGCCCAAACAGAAACAACGTCGTTATCGCACAGAAAGGCCTTTCTCTTGCGAACACTGCGCCGCACGGTTCACGCTGCGTTCCAACATGGAGAGGCATATCAAACAACAACATCCGCAATTTTGGTCGCAACGCCAAAGGTCTTCGATGGGAAACCCCGGCCGGAAGCCAAACTTACCGCCAGCGATGAAGAGCCCTATTTGTGAACTAAGCATTCCTACCTACGAAGCACCGAAGTCTCACGATTTTGAAGAAAACAAAGCTTCGGTTGCCgagaaattaaaatacGCCATTTTGTCTCAACACTTGCGAGCGGCGCAGGAACGCGAACAGGAGCAGCGGGAGGATCCTGAGGATGATGCCGATACATTGGTTATTGACGAACCGGAAGACTCGCCCAAACCCGAACCGGCTAAAACCGAAACTGCAAAGTCCAGGATTTTGGAAGAGAAGTTGAAGGAGTTGAGGGATAAGCAATTGATGAAGGAAAAACTTTTTGAACGGGAATCCAGCAACAAGAAAAGTGAAGAAGATCTAGTTCCAGTTTCTCGATTATTGGTCAATGTTTCGCAACAACAAAACGAGTTCAAAGAATATTTCCGTCCGGAGCATGAGGAAAATGAGATTAGCGAAGAAGACGAAGAAGGACTAGTTGCCAGCGGAAGCACTAGCGAGGGAAATTCTGGAACTGATGAAAATAGGGAAAGTGATAATCACATCAGTCAACCGGAAAAGAAAAAGTCGGCCTACTCGCTTGCACCAAATCGTGTCAGTTGCCCATACTGCAGTCGTAAATTCCCATGGACGTCATCTCTCCGCCGACATATTCTTACTCATACTGGCCAGAAACCCTTCAAGTGTAGTCATTGTCCACTTTTGTTCACCACAAAATCAAACTGTGACCGTCACTTACTCCGCAAACACGGAAACACCGCCACTACTATCTCGAACGAGACTGCAAACAGCTTCATGATGCGCAACGTTCCCGAACGTCCCTTCAAATGCTCGAGTTGCCCCTCCAGCACATTCTCCACATATTCCAACCTGAAGAAGCACATGATTTCCAAGCATGGTGCGCAGGATGACCGCCAGGGCTACGAAGCTGGCAGTTCCGAAGATGAAAAGAACAACAGCGATCACAAGTCTGACTGGGAGGCACAGATTTCACACTCTAAGATGAGCCTCAGTCTCCTACCCGATAATTCGCATCTCACCCAGAACTCAGACCTTCCGTTCAAATGCCATCTCTGCGACAGCTCGTTTGCTGAACGACAGGAATCTCTTGACCACATTCGCGACAAACACGCCTCTGAGTATGATCTATTGATGAGCAAAAATGCATTGGATGCTAACACGTCCACTCCTGAAGAGGGCAACAACCACGACGATGAAGACAATGAAGCCATCCGCGGCAAATTCCCCGATTATTCCAACCGCAAAGTTATTTGCGCGTTTTGCATGAGGCGCTTCTGGTCGGCGGAAGATTTGCGCAGACATATGCGAACGCACACTGGTGAAAGACCCTTCAGCTGCGACATTTGCAGACGGCGCTTTACGTTGAAACACAGCATGCTGCGTCATCGCAAGAAGCACAACCTCGCCTTCGGCCAGCAGGACAACGCGCAGTCTGACGAAGAAGTTGCCGTTGAGAAACAGCCGATTGAAATTAAACGAAAACCAACCTGTGAGTCATCCGACAAGGAGAAGGAAGATTCGGATGTTAATGAAGGTAGTGACTTAATAAGCAATTTACTAGGGATTAGAGATCGCTCGCTGATCGAACAAGTTCTGACTGGATCTGCGGACGACGCCGCTAAGTTATTAGGTGTTGGCAAAGAATAG
Protein Sequence: MQGVLCPPPGQFDRTAPNKVDEMEVTAEPLTKETSQSDSGIFSATGNSTFPSSVTDENRTQSENETDNRSDCSSPDRKFLCPICDRMLTSQHEFTLHIRSHNNDAEAPQDPEKGYTCRICSKVLSSSSSLDRHVLVHSGERPFTCKFCGDTFTTNGNMHRHMRTHKDNYESDGSDSTVSSGSKSIEYNNNKVDKYDNKRKISADDDGMQLRKKPHLDIDDETYKCPVCSRDDFNSKKSLEVHLEDNHPDYPAKCHQCNQIFNNQKRLNYHKSTVHADDSNGKSKNVVVGFKHIDYVDFTSEKFPHIARHECEKVFHKSAVGPKYTCNKCSRAFPCDKSLEFHMRECGSREKHLEIPRAASSIKREEFFRHLDLEDNSFDKHQALKTLPFMLNHGFTKNNIEEAIKSMDHAKDLADIPSIISLTHGSFLQQLQGKNNDISQMENEKTEEEESQDVFAQEFRKMKLRGEFPCRLCTSVFPNLRALKGHNRTHLNSALNGTYRCNMCPHSSLDKAALIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHSKNTREEVKKAIIYHPSEDPTNEDVNKHAIDAKKLNISNNSIDSTEMNSIRSSTPNSIPPAFPDVHIPKDYPSLFPLVPKIPTVNELISENRSKDSNWPSQFATSTPNKPSIRVKDVNVLKKIPEQEQFSDEEDSEPMALDLSKKKSAKEHNTSNGTDMDTTDSTPKNQISNFPMTDILTQQLLKSSPAADPALSAIFAAHLALYRNYMPGFPLTPLNPLMMPSMLPEPPMSPETKDRFQRQLSGGGIKNMYPPNYPLFSDMKIESQPPKNDEMKPLTLNVDNLMDNGHMKSSPVLQQKSELLQSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCAARFTLRSNMERHIKQQHPQFWSQRQRSSMGNPGRKPNLPPAMKSPICELSIPTYEAPKSHDFEENKASVAEKLKYAILSQHLRAAQEREQEQREDPEDDADTLVIDEPEDSPKPEPAKTETAKSRILEEKLKELRDKQLMKEKLFERESSNKKSEEDLVPVSRLLVNVSQQQNEFKEYFRPEHEENEISEEDEEGLVASGSTSEGNSGTDENRESDNHISQPEKKKSAYSLAPNRVSCPYCSRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNTATTISNETANSFMMRNVPERPFKCSSCPSSTFSTYSNLKKHMISKHGAQDDRQGYEAGSSEDEKNNSDHKSDWEAQISHSKMSLSLLPDNSHLTQNSDLPFKCHLCDSSFAERQESLDHIRDKHASEYDLLMSKNALDANTSTPEEGNNHDDEDNEAIRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNLAFGQQDNAQSDEEVAVEKQPIEIKRKPTCESSDKEKEDSDVNEGSDLISNLLGIRDRSLIEQVLTGSADDAAKLLGVGKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00629975;
90% Identity: iTF_00632291;
80% Identity: -