Dtri033339.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dysmachus trigonus
Gene Symbol
-
Assembly
GCA_949715965.1
Location
OX454322.1:57381296-57396618[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 2.9e-06 0.00055 21.6 1.7 1 23 314 336 314 336 0.98
2 9 2.7e-09 5.1e-07 31.1 1.6 1 23 342 364 342 364 0.98
3 9 3.3e-05 0.0064 18.2 0.4 1 23 370 392 370 392 0.98
4 9 3.7e-06 0.00072 21.2 0.9 1 23 398 420 398 420 0.98
5 9 2.1e-05 0.0041 18.8 1.3 2 23 541 562 540 562 0.96
6 9 2.7e-09 5.1e-07 31.1 1.6 1 23 568 590 568 590 0.98
7 9 0.0014 0.28 13.1 0.6 3 23 598 618 596 618 0.97
8 9 0.00013 0.025 16.3 0.8 1 23 624 646 624 646 0.99
9 9 0.018 3.5 9.6 0.8 1 23 652 676 652 676 0.95

Sequence Information

Coding Sequence
ATGGCTATAAATTTTTCCGCATCGTTTGCGGCATGTCTGGCCGCAGGGCTAAAAGTCCCGCGCCAGATTATGTACTGCATATCGCAGGACACCGGAGCCCCATACGTCCTCTACAAGGACTCCCAGGAGGCGGCTGAGCGCAGTGCAGCGGCGCTTGGCGGTGCGGCGCAGTGGGGCACAGATGTTTACCCGTCGATGCAGCAGAGCTCACAGGCACACATTACTGCACAAAATGCTCAAAATACACCTCAGATTTCTGCTGCAGCAGCGGCGGCCGCAGTGGTGGCTGcccagcaacagcaacagcagcagcagcagccgcacAGCCCTCCCGGGGAGGGCGACCAAAACAGGGACGGCAGTGGGGGAGGGGGCCCTCACCAAACAGGTCTTCCGTCACCCTCAACTAGTCCGTATCCGCCGCGACCTAATGGCCAGGATGACGACGTAACGATGAGCCAGGTCGCActgcaacagcagcagcagcagtccGTGCAGGCGAGTCAGCAGCAGCAGAATCAAGCCGGTCAGCAGCAGCAAAACCCAAACCAAAGTTCGAATGATCCGCAGCAGAGGAATATCGAAATGTCCGTTAGCGACCCCCAGTCAGCCagtcagcagcagcagcagcagaaccAGTCGAATAATGGCAACCCTCAGTCGAACGGGCCCTGCTTTGACCCGCCCCAGACTGAGCTGGGGTACTATGCACCCCGGCACCCAGGGCCCCAGGGGACGATGCTAGCGCCGCCTGGCTTCCCCCCGCTGCACTACCTGAACAAGCCAGTGTTGCCCGGCATGACGGGGTCGATGGACCAGTCCGGCGGCCTCGAGACCTACGCGATGCCAGACCTGCTGCCCGGCCACGGGATGCACCAGGCGGCAGCGACCCCCTCGCCCAGCTCGCACAAGACAAAGTCTCAGAATGACATGCGGCTCTTCAAGTGCTTAACGTGCGGCAAGGACTTTAAGCAGAAGAGCACCCTCCTGCAGCACGAGCGCATCCACACCGACTCGCGGCCGTACCCCTGCCCCGAGTGCGGCAAGCGGTTCCGGCAGCAGTCGCACCTGACGCAGCATTTACGCATCCACGCGAACGAGAAACCATTCTCGTGCGCCTATTGCCCGCGCAGCTTTCGACAGAGGGCGATTCTGAACCAGCACATACGCATCCATTCGGGTGAGAAGCCCTACGCATGCCCAGAGTGCGGCAAGCACTTTCGCCAGAAGGCCATCCTCAATCAACATGTGCGCACCCACCAAGATGTCTCACCGCatctcattttcaaaaatggaccAACACCAACTCTGTGGCCCCAAGACGTACCCTTTCCAGGTGATGAGACTGAAACGAAAAACGAGATTGGCGGCTACCCAGACGACGCATCACAGGGCACGCCCGAGTCCAGGGCCTGCTTCTCACCGGACGGGAACGGAGGGCTCCAGTATCAGGCCTACTTCAAGGACGGGAAAGGTATTAATCATTCGGTATTCGGTTCAAATTTGGGCTCCCTGCAATACATAAAACAACAAGGCGGAgggggcggcggcggcggccaGAAGAGCATGCTGCCAGACGTGATACAGCACGGCCGGTCGGCCGGAATGCCTCTGTACGTGCGGTGTCCGATCTGCGAGAAGGAGTTCAAGCAGAAGAGCACGCTGCTGCAGCACGGGTGCATCCACATCGAGTCGCGGCCGTATCCGTGCCCCGAGTGCGGGAAGCGCTTCCGGCAGCAGTCTCATCTCACGCAGCATCTGCGGATACACACGAACGAGAAACCTTACGGGTGCCTGTATTGTCCGAGATTCTTCAGGCAGAGGACCATACTTAATCAGCATATTCGAATACACACAGGAGAAAAACCTTACAAATGCGCCCAATGCGGGAAGGATTTCAGGCAAAAAGCCATTTTGGACCAACACACGAGAACTCACCAGGGCGATCGACCTTTCTGCTGTCCTATGCCAAATTGCAGGCGGCGGTTTGCGACAGAGCCGGAGGTGAAAAAGCACATAGACAACCACATGAATCCGCATTCATCGAAATCTCGCCGTCACCTGAACCACATGACGAACGAGGCGAAAAACGCGGCCGCGGCCGCCCAGTTTCTGACGTCGATGGACAACAAGGCGAACATAATTCCGCGGATGGGACCAGTCGTTAAGCATGAGCTCTATTTTCCACAATGTTATGGACCACCCTTTAATCAGGCCTTCGGGgcacagcagcaacagcaacagcaacaacaacagcagcagcaacagcctcaacagcaacaacaacagacGCAACCGCAGCAGCCGGCTCAGCAGGCCCATGCCCAAACAGGCGGCGGGACGCCTGTGGCGGCAGGCGCTGGAACCCCTGTCGGGGCGGGCGCTGTTGTTACCGTATCCAGCACGGCCCCCGCGGGCGGCACGCAACAAAATCCAACTACAGTCGTTGCGCAGTGA
Protein Sequence
MAINFSASFAACLAAGLKVPRQIMYCISQDTGAPYVLYKDSQEAAERSAAALGGAAQWGTDVYPSMQQSSQAHITAQNAQNTPQISAAAAAAAVVAAQQQQQQQQQPHSPPGEGDQNRDGSGGGGPHQTGLPSPSTSPYPPRPNGQDDDVTMSQVALQQQQQQSVQASQQQQNQAGQQQQNPNQSSNDPQQRNIEMSVSDPQSASQQQQQQNQSNNGNPQSNGPCFDPPQTELGYYAPRHPGPQGTMLAPPGFPPLHYLNKPVLPGMTGSMDQSGGLETYAMPDLLPGHGMHQAAATPSPSSHKTKSQNDMRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYPCPECGKRFRQQSHLTQHLRIHANEKPFSCAYCPRSFRQRAILNQHIRIHSGEKPYACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPTPTLWPQDVPFPGDETETKNEIGGYPDDASQGTPESRACFSPDGNGGLQYQAYFKDGKGINHSVFGSNLGSLQYIKQQGGGGGGGGQKSMLPDVIQHGRSAGMPLYVRCPICEKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCLYCPRFFRQRTILNQHIRIHTGEKPYKCAQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHSSKSRRHLNHMTNEAKNAAAAAQFLTSMDNKANIIPRMGPVVKHELYFPQCYGPPFNQAFGAQQQQQQQQQQQQQQPQQQQQQTQPQQPAQQAHAQTGGGTPVAAGAGTPVGAGAVVTVSSTAPAGGTQQNPTTVVAQ