Basic Information

Insect: Dasypogon diadema
Gene Symbol: -
Assembly: GCA_006980735.1
Location: jcf7180002942805:9753-26079[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.5e-06 0.00017 21.6 1.7 1 23 316 338 316 338 0.98

2 8 2.3e-09 1.6e-07 31.2 1.6 1 23 344 366 344 366 0.98

3 8 2.9e-05 0.002 18.3 0.4 1 23 372 394 372 394 0.98

4 8 1.9e-05 0.0013 18.9 1.3 2 23 512 533 511 533 0.96

5 8 2.3e-09 1.6e-07 31.2 1.6 1 23 539 561 539 561 0.98

6 8 0.0013 0.085 13.1 0.6 3 23 569 589 567 589 0.97

7 8 0.00012 0.0078 16.4 0.8 1 23 595 617 595 617 0.99

8 8 0.016 1.1 9.7 0.8 1 23 624 648 624 648 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.5e-06	0.00017	21.6	1.7	1	23	316	338	316	338	0.98
2	8	2.3e-09	1.6e-07	31.2	1.6	1	23	344	366	344	366	0.98
3	8	2.9e-05	0.002	18.3	0.4	1	23	372	394	372	394	0.98
4	8	1.9e-05	0.0013	18.9	1.3	2	23	512	533	511	533	0.96
5	8	2.3e-09	1.6e-07	31.2	1.6	1	23	539	561	539	561	0.98
6	8	0.0013	0.085	13.1	0.6	3	23	569	589	567	589	0.97
7	8	0.00012	0.0078	16.4	0.8	1	23	595	617	595	617	0.99
8	8	0.016	1.1	9.7	0.8	1	23	624	648	624	648	0.95

Sequence Information

Coding Sequence: ATGGCTATAAATTTTTCCGCATCTTTTGCGGCATGTCTGGCCGCAGGGCTAAAAGTCCCGCGCCAGATAATGTACTGTATATCACAAGATACAGGAGCTCCATATGTTTTATACAAAGATTCACAAGAAGCAGCTGAGCGCAGTGCAGCAGCTTTAGGAGGTGCAGCACAATGGGGTACAGATGTTTACCCATCAATGCAGCAAAGCTCCCAGGCACATATAACAGCACAAAATGCTCAAAATACACCTCAAATAGCTGCTGCTGCCGCGGCAGCGGCTGCAGTTGCAGCACAACAGCAACAACAACAGCAACAACAGCAGCAACAGCAACAACAACAGCCCCATAGTCCCCCTGGTGACGGCGATCAAAATCGTGATGGGCCGCATCAGGCAGGTCTTCCATCGCCGTCAACAAGTCCATACCCACAACGACCGAATGGCCAAGACGAAGATGTTGCAATGAGTCAGGTCGCCCTCCAGCAGCAGCAGAGTGTCCAAGCGAGTCAACAACAGCAACAAAATCAAGCAGCGCAACAGCAGCAAAATCCAAACCAAAGTTCGAATGATCAACAACAGCGGACTATTGAAATGTCCGTTAGTGATCCTCAGTCAGCAGCAAGTCAGCAACAGCAGCAAAATCAGTCGAATAATGGTAACCCACAACAGTCAAATGGTCCTTGCTTTGATCCGCCACAGACTGAATTGGGTTATTATGCACCGAGGCATCCGGGTCCTCAGGGAGCCATGCTTGCACCACCTGGATTCCCGCCGCTGCATTATCTTAATAAGCCCGTGCTACCCGGAATGGCGGGAACTATGGACCAAACAGGTGGCCTTGAAACGTACGCAATGCCCGACTTATTACCTGGTCACGGAATGCATCAGGCGACTGCAACATCGTCACCTAGTTCACATAAAACAAAACCACAAAATGATATGCGGCTGTTTAAGTGCTTAACGTGTGGTAAAGATTTTAAGCAAAAAAGTACTCTCCTGCAACATGAAAGAATTCATACGGATTCGCGGCCATATCCATGTCCGGAGTGTGGTAAAAGATTTCGGCAGCAATCACACCTGACACAACATTTACGTATCCATGCCAATGAGAAACCATTCTCGTGTGCCTATTGTCCACGCAGCTTTAGACAGAGAGCGATACTGAACCAGCATATACGCATCCATTCGGATGTTTCTCCTCATCTTATATTTAAAAATGGACCAACACCAACATTATGGCCACAAGATGTACCCTTTCCAGGTGATGAGACTGAAACTAAAAATGAAATTGGTGGCTATCCAGACGATGCATCACAAGGTACGCCCGAATCAAGGGCGTGCTTTTCACCTGATGGCAATGGTGGCCTTCAGTATCAAGCCTATTTTAAGGATGGTAAAGGTATTAATCATTCGGTATTCGGATCAAATTTGGGCTCCCTGCAATATATAAAGCAAGGTGGAGGAGGAGGTGGACAAAAAAGTATGCTACCAGATGTGATACAACATGGCAGGTCAGCTGGCATGCCATTATATGTGCGCTGTCCAATTTGTGAAAAAGAATTTAAGCAAAAAAGTACATTACTTCAGCACGGGTGTATACATATTGAGTCAAGGCCATATCCTTGTCCGGAATGTGGAAAAAGATTCCGGCAACAGTCACATTTAACGCAACATTTGCGAATACATACAAATGAGAAACCTTACGGGTGCCTGTATTGTCCAAGATTCTTTAGGCAGAGGACCATACTTAATCAGCATATTCGAATACATACGGGTGAAAAACCGTATAAATGTGCACAATGCGGGAAAGACTTTAGGCAAAAGGCCATTTTGGACCAGCACACAAGAACTCACCAGGTAGGTGATCGGCCATTCTGTTGTCCAATGCCGAATTGTAGGCGGAGGTTTGCAACAGAACCAGAAGTTAAAAAGCATATAGACAACCACATGAATCCACATTCGTCGAAATCTCGTCGCCATTTAAATCATATGACGAATGAGGCAAAGAATGCAGCAGCAGCCGCGCAATTTTTAACATCAATGGATAACAAAGCAAATATCATACCACGTATGGGACCAGTTGTGAAGCATGAACTCTATTTTCCACAATGCTATGGACCACCATTTAATCAAGCTTTTGGAGCACAACAGCCGCAACAACAGCAGCAACCACAACAGCAGCAGCAGCAGCAACAACAACCGCAACAACAGCCAACGCAAACACATGCTCCAAATGGGGGTGGGACACCAGTTGCAACGGGTGCGGGAACACCTGTCGGTGCAGGTACAGTAGTAACTGTTTCTAGTGCAGTGTCCGCGGGTGGCACGCAACAAAATCCAACTACTGTTGTTGCACAGTGA
Protein Sequence: MAINFSASFAACLAAGLKVPRQIMYCISQDTGAPYVLYKDSQEAAERSAAALGGAAQWGTDVYPSMQQSSQAHITAQNAQNTPQIAAAAAAAAAVAAQQQQQQQQQQQQQQQQPHSPPGDGDQNRDGPHQAGLPSPSTSPYPQRPNGQDEDVAMSQVALQQQQSVQASQQQQQNQAAQQQQNPNQSSNDQQQRTIEMSVSDPQSAASQQQQQNQSNNGNPQQSNGPCFDPPQTELGYYAPRHPGPQGAMLAPPGFPPLHYLNKPVLPGMAGTMDQTGGLETYAMPDLLPGHGMHQATATSSPSSHKTKPQNDMRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYPCPECGKRFRQQSHLTQHLRIHANEKPFSCAYCPRSFRQRAILNQHIRIHSDVSPHLIFKNGPTPTLWPQDVPFPGDETETKNEIGGYPDDASQGTPESRACFSPDGNGGLQYQAYFKDGKGINHSVFGSNLGSLQYIKQGGGGGGQKSMLPDVIQHGRSAGMPLYVRCPICEKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCLYCPRFFRQRTILNQHIRIHTGEKPYKCAQCGKDFRQKAILDQHTRTHQVGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHSSKSRRHLNHMTNEAKNAAAAAQFLTSMDNKANIIPRMGPVVKHELYFPQCYGPPFNQAFGAQQPQQQQQPQQQQQQQQQPQQQPTQTHAPNGGGTPVATGAGTPVGAGTVVTVSSAVSAGGTQQNPTTVVAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00628576;
90% Identity: iTF_01256561;
80% Identity: -