Dtit012761.2
Basic Information
- Insect
- Dynastes tityus
- Gene Symbol
- -
- Assembly
- GCA_029618875.2
- Location
- JAROYD020000003.1:2641527-2643401[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.017 51 5.7 0.0 21 44 173 196 165 200 0.84 2 15 0.0043 12 7.7 0.1 18 51 198 231 196 234 0.85 3 15 2.8 8.2e+03 -1.3 0.0 21 32 229 240 227 253 0.74 4 15 0.0042 12 7.7 0.3 16 44 252 280 238 284 0.81 5 15 0.018 53 5.7 0.1 21 45 285 309 277 316 0.80 6 15 0.11 3.2e+02 3.2 0.1 13 46 305 338 301 345 0.82 7 15 0.47 1.4e+03 1.2 0.2 21 31 341 351 333 364 0.79 8 15 0.23 6.6e+02 2.2 0.1 21 44 369 392 364 396 0.87 9 15 0.031 89 5.0 0.0 21 44 397 420 384 424 0.83 10 15 0.051 1.5e+02 4.2 0.0 18 44 422 448 413 452 0.80 11 15 0.06 1.7e+02 4.0 0.0 21 44 453 476 449 481 0.83 12 15 0.33 9.5e+02 1.7 0.1 22 46 510 534 505 540 0.77 13 15 0.089 2.6e+02 3.5 0.0 21 44 537 560 532 566 0.75 14 15 0.43 1.2e+03 1.3 0.1 22 45 566 589 561 592 0.87 15 15 0.066 1.9e+02 3.9 0.7 26 45 598 617 594 622 0.88
Sequence Information
- Coding Sequence
- ATGGCCACAGAGTATGATGAATTGCATGAACATTACGACAATAACTGCGAAGAATATAATAGTGCCGCagatattaaattagaagattgtATAGTTCAAACggaagattttcttgattcaaaagcaggaatatctttgataagcGACGACATCTTACCACAAGGTGTCTCATTGGGAAATGTTAAAGATGAAAATTTGTATGAGCAATTAAGCAAGGATATCGTTAGTACTGAGAACtgtgaaaaatataattgtaatgcagatattaaattagaagattttgTAGTTCAAACaggagattttcttgattcaaaaggAGGAATATCGTTGATAAGTGATCACAGCGTAGCACAAGGTGAAAATTCGAATGACCATTACAATAACAGCTTTAAACACAAACAACTACATCATCATATTAGGAGCGTGCATTTGCACAAGAAAAATCACATGTGTAGATATTGCGGACGGACGTTTTGTCGCAAGGCTGATCTGACGAAACATATTAgaacacacaccggtgaaaagccttttacttgcgaaatttgtaaaaaatcattttctgagAAGAGTAACCTGATGGCTCATATTAGAAGACACAcgggtgaaaagccttttacttgcgagatttgtaacaAGTCATTTTGTGAGACGAATAGACTGAAGAAACATATTACAGTACACAcgggtgaaaagccttttacttgcgagactTGTAAGAAGTCATTTTGTGAGAAGGGTGGACTGACGAAACATGTTAGGAAACACACcagtgaaaagccttttacttgcgagatttgtaagaAATCATTTTGTGAGAAGGATAGACTGAAGAAACATATTAGAACACACACTgatgaaaagccttttacttgtgagATTTGTAACAAGTCATTTAGTGAGAAGGATGGACTGAAGAAACATATTAGAAGGCACGCCTGTGATAAGCCTTTTAGTTGCGAAACTTGTAAGAAGTCATTTCGTGAGAAGTATGTACTGACGAGACATATTAGAACGCACTCCGATGAAaaaccttttacttgcgaggttTGTAAAAAGTCGTTTGCTGGGAAGAATGGATTGACGATTCATATGATAAAACACACcggtgaaaggccttttacttgcgagacttgtaaaaagtcattttgtgAGAAGGGTAGACTGAGGAAACATATTAgaacacacaccggtgaaaagccttttacttgcgagatttgtaagaAGTCATTTAGTGAGAAGGAGGGACTGAAGAAACATATTAGaaaacacaccggtgaaaagccttttacttgcaaagtttgtaaaaagtcgtTTCTCATGAAGCATACACTGACGAGACATATTAGaacacacactggtgaaaagccttttacttgtgagATTTGTAAAAAGCCGTATGCTGATAAGCATGGACTGACGAGACATATGATAAAACACACTGGTGACAAatcttttacttgcgagatctataataaatcatttagtgaCAAGTGTGTATTGaagaaacatattaaaatacacactgttgaaaagccttttacttgcgaagtttgtaaaaagtcgtTTACTGCGAAGCATGTACTGATCAAACATATTAGaatacacaccggtgaaaaaccttttacttgcgaaatttgcaaaaagtcatttTTTAGGAAGAGTGGACTAAAAACTCACATTAAATATCACACCGATGAAAAACGTTTTActtgtaaagtttgtaaaatgctATTTTTCTGCTCTGCATATGTAAAAAGACATATGGCAGTGCATATGGGGGATTGCCGTTATTCTTGTGAGTTGTGTTCCGCTAAATTTAGGAATTCATACAGTCTATCACGGCATGTGAGGCAgcatattaaaaaggaaatctAA
- Protein Sequence
- MATEYDELHEHYDNNCEEYNSAADIKLEDCIVQTEDFLDSKAGISLISDDILPQGVSLGNVKDENLYEQLSKDIVSTENCEKYNCNADIKLEDFVVQTGDFLDSKGGISLISDHSVAQGENSNDHYNNSFKHKQLHHHIRSVHLHKKNHMCRYCGRTFCRKADLTKHIRTHTGEKPFTCEICKKSFSEKSNLMAHIRRHTGEKPFTCEICNKSFCETNRLKKHITVHTGEKPFTCETCKKSFCEKGGLTKHVRKHTSEKPFTCEICKKSFCEKDRLKKHIRTHTDEKPFTCEICNKSFSEKDGLKKHIRRHACDKPFSCETCKKSFREKYVLTRHIRTHSDEKPFTCEVCKKSFAGKNGLTIHMIKHTGERPFTCETCKKSFCEKGRLRKHIRTHTGEKPFTCEICKKSFSEKEGLKKHIRKHTGEKPFTCKVCKKSFLMKHTLTRHIRTHTGEKPFTCEICKKPYADKHGLTRHMIKHTGDKSFTCEIYNKSFSDKCVLKKHIKIHTVEKPFTCEVCKKSFTAKHVLIKHIRIHTGEKPFTCEICKKSFFRKSGLKTHIKYHTDEKRFTCKVCKMLFFCSAYVKRHMAVHMGDCRYSCELCSAKFRNSYSLSRHVRQHIKKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00627445;
- 90% Identity
- iTF_00627445;
- 80% Identity
- iTF_00627445;