Dtit047657.1
Basic Information
- Insect
- Dynastes tityus
- Gene Symbol
- egg
- Assembly
- GCA_029618875.2
- Location
- JAROYD020000013.1:10103393-10115901[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 1.4e+04 -2.6 0.0 17 35 491 509 491 510 0.83 2 3 0.34 5e+03 -1.2 0.0 31 42 711 722 701 726 0.84 3 3 7.9e-16 1.1e-11 45.7 0.1 5 75 752 815 749 817 0.91
Sequence Information
- Coding Sequence
- atgGAAGAAACAATGGATGTGGAAATTATTGACGATGATACTCCTCCCAATGAATCGGCAAAAGAATCAGACGCATCAAAAACTGCCGATACAACATCTAACAATGATGTGGTTGTTTTGGACGACGAAATTTCACCAGagtGCGAAACAATCGATTTGGTCCATTCAGAAATGACAGGAAATACGAAATGTATAAACTATTTATGTAAAGGTGGTGACTCGATGATTGAACCACCTGGATTTTGTCTCAGCTTTTACCGAGTGAAAAACAAACCCAATAAGAAACAACAAATTTGCACCGATTGCTACGACAACGCAATAGAACATTATGATAAATTAGCTGAAGCGTTGACGACGAAAGGATCATTGTTAGATGTAGAATTACCTTTTAGGAACGATGTTGTTGAAATAGAAGATTCTGATTCCGATGAGGAAAGCATGGGCGATATACATCTTGATACCGAAACGGTGCAGATGTTGGAGGAACATTTCGATAGTGCGATGAGTGCTGTTATGAACAAGTATGATTTCGATGAGCAGATTAATAAGGCTTTGAATGCATTGAATACACGGTGCGATACTGTTAAGGATTCCTTCGTGGAAGTTAAAACAATGTTCAAAAACATACGCACGGAAACGGACAATATGATTTTTCAACTGTCTGATATGCTTCGACCAGATAACGTTGAATTGCTGCCGCTGGATATTACCAATAGTAAGACACAAGTTGTCAGAAATCAACCAGTTAGAAGAACGAAAGCTGGTTCGTCAGCTACTTCTCCAGCGTCTCCAAGGACGCtggtatttcaaaaaaatattagagCAGCTCAGTCCACTTCCACTACTCCGAACAAATCAACTGCTAAAGGTTCAGCAGCAATTCCAAAAACTCCAACATCCAAAGCCGCGGTTCTACCCAAACCTTCAGTTCTATCTAAGACTCCAATTCTACCGAAGACTTCAGTTCTACCTAAGACTTCAGTTGTACCTAAACCCCCAATTCTATCTAGAGCATTACCACCTCTGACAATGATGAAAGCAACTACGGCTACAGTAGTGTCAAGTTCAGCAATAACTGGCGATACGGATTCAAATCTTATAGTTTTGCAAGAGATTAAGAAGGATCCAGATGGCTTTGATGCCCAGTCTTCATTTGTAGGCGATCCGGATGCACCACCTGGTAATCTACCTCCAAGAGGACAGTTATTGAAATCTCCGTTGATTGTAGGTGAAGCTTACTACGCTAACAGATCTGAAATAATCGGAGCTTGGATCAAGGTCACGCTGAAGGAGATAATTGTCCCAGGTACACGGAGGGATGGTCAGATATATACTAATACCATGTACGTAGTAGCAATCGAGAACAGACAGAAGATCATTAGACAGAAGATTGTAACCGGAAGAGAGATCGCCTACTCCCTTCCGGCTAATGTGCAATTGGACGTTGGCGCGCGTGTAATAGCCGTCTTCCGCGAAGTGCTCTTACCGGAAGAAGCAAGAGAGAGAGTGAAGAAGGATGTTTTCTATCCGGGAATAGTAGCGGAACCATTGCAATCTAGCAATAAATTcaggtatttaatattctttgatGACGGTTACGCGCAATACGTCAACTTCAGTTTGGTGCACCCGATTTATGAGGCGAGCAAAGATGTTTGGGAAGACGTGAACATCAATTCCCGCggttttattaagaaatatctTGAGAAGTACCCGGAAAGGCCGATGGTGAAGTTGCACAAGGATCAAACGATCAGGACTGAATATAACGGAAAATGGTGGATAACAACCGTGATGAGCGTGGATTGTTCCCTTGTCCAGATGTTCTTCGATGCTTCAGGTAGAATTGAATGGATCTACAGAGGATCGACGCGATTGAATCCCATGTTTAAGGAGGAACAAGCGGCCAGTAATAGGTTGCAACATCGTCAGAGAATGACCAGAAAAGCTAATACTACGGAGCCCTATGTCGAATATACAAGATCTGATCCTCAGCAACCCGAACAACCACCACCCCAACGATCTGTCGCTAGGAAGAGCACGTCAAGGCCtccttgtaataataataatataacgtaCAGAGTGAATCATTTCTTGCCAATTGCGAATCCACCTCGAGAAGCTCCGGCAACGAAGATCGTGTACTACACTCCAAGACGTCAAAAACCAAAAACCAACGTTTACACACCTCACTCCTGCGCTCCCAAATGCAAGGAATTCATGTATTGTTCGCTATCGCGTCTAAAAGGTTACAGTCCTCTGTCTAAACCGTTACTCTGTGGATTCTACCGATTGATGTACAAGTGCAAGAATAGGAAGTGCGTGCTGTATAAAGCGCCTTGCGGAAGAACCTTACGTAACATGCAAGAAGTGCATATGTACTTGAGGACCACCAAGTCGGATTTAACGGTGGATCTCTTCGATTTTAACGTTTACGTACGATGTTTGGCCGAATTCATGGTTGAGCAGAAGAATATTCTTATAAAAGATCTATCACAAGGGAAAGAAGAGTGTCCAATCACAGTTGTTAACTATGTCAATTCCGCCCAGTTGAATTTCTGTAATTATTCTACGAAGAGGGAGCCAATGGAGGGGGTTAATCTTAATACGAATACCGAGTTCCTGACTGGGTGTGATTGTACTGATGATTGtgttGATAGACAGAAATGTTCATGTTGGCAACTAACTTTGCAATGTCTAAAATACATGGATAAGGATACTGATCCCGAGTCAGTTGGGTACCAATACAGGAGATTGCCAGAACCCATATTTTCAGGAATATATGAATGTAATAGGAAATGTAAATGCGCATCCACATGCTTGAACAGAGTCGTACAGAACCCACTCCACCACAAGCTTCAGATATTCCAAACTGACATGAAAGGTTGGGGAATCCGCTGCTTAAACGACATCCCACAAGGCtctttcatttgcatttacGCAGGAGTCTTATTAACAGAAGACATGGCAAACAGGGACGGCAAATTCTATGGAGATGAATATTTAGCAGAGCTAGACTTCATAGAGACCGCCGAAAGGACTAAAGAAGATTACGAAGAGGACCCGTATCACGACGAAGTGGAAAGGGACTCGAAGTCGCCGCATAGGTCTCCGGAAGATAGCGGACCGGACGACGACGAAGAAGATGAGCATATGAGACGTACTGTAGATGATAGGGATTTCGTCCCGAGTTTTCAGGCGAAGAGACACAGCGAACTGGATAGTGGGATTCGGACGAGGTTGAGGAAACGGCAGGAAGCTGTGACTGTTAAGCAAGAGAAGAGGGCTGTTATTCCTTCGAATATGATGGATGATGATACTGTTATGATTAGCGATGATGAGGATTATGTCCCCAGGGAACCTTCCAGCTTTAATCCCAAACAAGATTCCAGTTTAACTGAAGGGGGCGAAGGAAAATACAAATCAGTAAGAGAATTATTCGGTACCGACGAAGATGTTTACATTATGGACGCGAAAAACACTGGAAACATCGGCAGGTTCTTGAACCACTCGTGTTCGCCGAACATTTTCGTCCAGAACGTTTTTGTTGATACTCACGATTTACGTTTCCCGTGGGTTGCTTTCTTTACTCTGAGTTACGTTAGGGCCGGTACCGAACTTACTTGGAACTACAATTACGATATCGGTAGTGTTCCCGGGAAGGAGCTATCTTGTTATTGCGGTTCGAGTGAGTGTAAAGGTCGcttgttgtaa
- Protein Sequence
- MEETMDVEIIDDDTPPNESAKESDASKTADTTSNNDVVVLDDEISPECETIDLVHSEMTGNTKCINYLCKGGDSMIEPPGFCLSFYRVKNKPNKKQQICTDCYDNAIEHYDKLAEALTTKGSLLDVELPFRNDVVEIEDSDSDEESMGDIHLDTETVQMLEEHFDSAMSAVMNKYDFDEQINKALNALNTRCDTVKDSFVEVKTMFKNIRTETDNMIFQLSDMLRPDNVELLPLDITNSKTQVVRNQPVRRTKAGSSATSPASPRTLVFQKNIRAAQSTSTTPNKSTAKGSAAIPKTPTSKAAVLPKPSVLSKTPILPKTSVLPKTSVVPKPPILSRALPPLTMMKATTATVVSSSAITGDTDSNLIVLQEIKKDPDGFDAQSSFVGDPDAPPGNLPPRGQLLKSPLIVGEAYYANRSEIIGAWIKVTLKEIIVPGTRRDGQIYTNTMYVVAIENRQKIIRQKIVTGREIAYSLPANVQLDVGARVIAVFREVLLPEEARERVKKDVFYPGIVAEPLQSSNKFRYLIFFDDGYAQYVNFSLVHPIYEASKDVWEDVNINSRGFIKKYLEKYPERPMVKLHKDQTIRTEYNGKWWITTVMSVDCSLVQMFFDASGRIEWIYRGSTRLNPMFKEEQAASNRLQHRQRMTRKANTTEPYVEYTRSDPQQPEQPPPQRSVARKSTSRPPCNNNNITYRVNHFLPIANPPREAPATKIVYYTPRRQKPKTNVYTPHSCAPKCKEFMYCSLSRLKGYSPLSKPLLCGFYRLMYKCKNRKCVLYKAPCGRTLRNMQEVHMYLRTTKSDLTVDLFDFNVYVRCLAEFMVEQKNILIKDLSQGKEECPITVVNYVNSAQLNFCNYSTKREPMEGVNLNTNTEFLTGCDCTDDCVDRQKCSCWQLTLQCLKYMDKDTDPESVGYQYRRLPEPIFSGIYECNRKCKCASTCLNRVVQNPLHHKLQIFQTDMKGWGIRCLNDIPQGSFICIYAGVLLTEDMANRDGKFYGDEYLAELDFIETAERTKEDYEEDPYHDEVERDSKSPHRSPEDSGPDDDEEDEHMRRTVDDRDFVPSFQAKRHSELDSGIRTRLRKRQEAVTVKQEKRAVIPSNMMDDDTVMISDDEDYVPREPSSFNPKQDSSLTEGGEGKYKSVRELFGTDEDVYIMDAKNTGNIGRFLNHSCSPNIFVQNVFVDTHDLRFPWVAFFTLSYVRAGTELTWNYNYDIGSVPGKELSCYCGSSECKGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01498889;
- 90% Identity
- iTF_00956312;
- 80% Identity
- -