Dhyl039892.1
Basic Information
- Insect
- Dynastes hyllus
- Gene Symbol
- egg
- Assembly
- GCA_029619255.2
- Location
- JAROYC020000013.1:8248624-8259958[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1 1.1e+04 -2.5 0.0 17 35 426 444 426 445 0.83 2 3 0.36 3.5e+03 -0.9 0.0 31 42 578 589 556 593 0.88 3 3 8.6e-16 8.3e-12 45.9 0.1 5 75 619 682 616 684 0.91
Sequence Information
- Coding Sequence
- atggAAGAAACAATGGATGTGGAAATTATTGACGATGATACTCCTCCCAACGAATCGGCAAAAGAATCAGACGCATCAAAAACTGCCGATACAACATCTAACAATGATGTGGTTGTTTTGGACGACGAAGTTTCACCAGagtGCGAAACAATCGATTTGGTCCATTCAGAAATGACAGGAAATACGAAATGTATAAACTATTTATGTAAAGGTGGTGACTCGATGATTGAACCACCTGGATTTTGTCTCAGCTTTTACCGAGTGAAAAACAAACCCAATAAGAAACAACAAATTTGCACCGATTGCTACGACAACGCAATAGAACATTATGATAAATTAGCCGAAGCGTTGACGACGAAAGGATCATTGTTAGATGTAGAATTACCTTTTAGGAACGATGTTGTGGAAATAGAAGATTCTGATTCCGATGAGGAAAGCATGGGCGATATACATCTTGATACCGAAACGGTGCAGATGTTGGAGGAACATTTCGATAGTGCGATGAGTGCTGTTATGAACAAGTATGATTTCGATGAGCAGATTAATAAGGCTTTGAATGCATTGAATACACGGTGCGATACTGTTAAGGattCCTTCGTGGAAGTTAAAACAATGTTCAAAAACATACGCACGGAAACGGACAATATGATTTTTCCCAACTGTCTGATTGGGGCCCCCCCGATAAGTTTAATTGCTGCCCCGGATATTCCTGGGAAGCCGTTGTCAGAAACAACCAATTTTGAAAACGGGGGTTTTTGGGGGAACACCCTTTGGGTTTATCCGCAATTatgttgttttttcaaaattttgggtttAGCATTACCACCTCTGACAATGATGAAAGCAACTACGGCTACAGTAGTGTCAAGTTCAGCAATAACTGGCGATACGGATTCAAATCTTATAGTTTTGCAAGAGATTAAGAAGGATCCAGATGGCTTTGATGCCCAGTCTTCATTTGTAGGTGATCCGGATGCACCACCTGGTAATCTACCTCCAAGAGGACAGTTATTGAAATCTCCGTTGATTGTAGGTGAAGCTTACTACGCTAATAGATCTGAAATAATCGGAGCTTGGATCAAGGTCACGCTGAAGGAGATAATTGTCCCAGGTACACGGAGGGATGGTCAGATATATACTAATACCATGTACGTAGTAGCAATCGAGAACAGACAGAAGATCATTAGACAGAAGATTGTAACCGGAAGAGAGATCGCCTACTCCCTTCCGGCTAATGTGCAATTGGACGTTGGCGCGCGTGTAATAGCCGTCTTCCGCGAAGTGCTCTTACCGGAAGAAGCAAGAGAGAGAGTGAAGAAGGATGTTTTCTATCCGGGAATAGTAGCGGAACCATTGCAATCTAGCAAAAACgGAAAATGGTGGATAACAACCGTGATGAGCGTGGATTGTTCCCTTGTCCAGATGTTCTTCGATGCTTCAGGTAGAATTGAATGGATCTACAGAGGATCGACGCGGTTGAATCCCATGTTTAAGGAGGAACAAGCGGCCAGTAATAGGTTGCAACATCGTCAGAGAATGACCAGAAAAGCTAATACTACGGAGCCCTATGTCGAATATACAAGATCTGATCCTCAGCAACCCGAACAGCCTCCACCCCAACGATCTGTTGCTAGGAAGAGCACGTCAAGGCCtccttgtaataataataatataacgtaCAGAGTGAATCATTTCTTGCCAATTGCGAATCCACCTCGAGAAGCTCCGGCAACGAAGATCGTGtacTACACTCCAAGACGtcaaaaaccaaaaaccaaCGTTTACACACCTCACTCCTGCGCTCCCAAATGCAAGGAATTCATGTATTGTTCGCTATCGCGTCTAAAAGGTTACAGTCCTCTGTCTAAACCGCTACTCTGTGGATTCTACCGATTGATGTACAAGTGCAAGAATAGGAAGTGCGTGCTGTATAAAGCGCCTTGCGGAAGAACCTTACGTAACATGCAAGAAGTGCATATGTACTTGAGGACCACCAAGTCAGATTTAACTGTGGATCTCTTCGATTTTAACGTTTACGTACGATGTTTGGCCGAATTCATGGTTGAGCAGAAGAATATTCTTATAAAAGATCTATCACAAGGGAAAGAAGAGTGTCCAATCACAGTTGTTAACTACGTCAATTCCGCCCAGTTGAATTTCTGTAATTATTCTACGAAGAGGGAGCCAATGGAGGGGGTTAATCTTAATACGAATACCGAGTTCCTGACTGGGTGTGATTGTACCGATGATTGTGTTGATAGACAGAAATGTTCATGTTGGCAACTAACTTTGCAATGTCTAAAATACATGGATAAGGATACTGATCCCGAGTCAGTTGGGTACCAATACAGGAGATTGCCAGAACCCATATTTTCAGGAATATATGAATGTAATAGGAAATGTAAATGCGCATCCACATGCTTGAACAGAGTCGTACAGAACCCACTCCACCACAAGCTTCAGATATTCCAAACTGACATGAAAGGTTGGGGAATCCGCTGCTTAAACGACATCCCACAAGgttctttcatttgcatttaCGCAGGAGTCTTATTAACAGAAGACATGGCAAACAGGGACGGCAAATTTTATGGAGATGAATATTTAGCAGAGTTAGACTTCATAGAGACCGCCGAAAGGACTAAAGAAGATTACGAAGAGGACCCGTATCACGACGAAGTGGAAAGGGACTCGAAGTCGCCGCATAGGTCTCCGGAAGATAGCGGACCGGACGATGACGAAGAAGATGAGCATATGAGACGTACTGTAGATGATAGGGATTTCGTCCCGAGTTTTCAGGCGAAGAGACACAGCGAACTGGATAGTGGGATTCGGACGAGGTTGAGGAAACGGCAGGAAGCTGTGACTGTTAAGCAAGAGAAGAGGGCTGTTATTCCTTCGAATATGATGGATGATGATACTGTTATGATTAGCGATGATGAGGATTATGTCCCCAGGGAACCTTCCAGCTTTAATCCCAAACAAGATTCCAGTTTAACTGAAGGGGGCGAAGGAAAATACAAATCAGTAAGAGAATTATTCGGTACCGACGAAGATGTTTACATTATGGACGCGAAAAACACTGGAAACATCGGCAGGTTCTTGAATCACTCGTGTTCGCCGAATATTTTCGTCCAGAACGTTTTTGTTGATACTCACGATTTACGTTTCCCGTGGGTTGCTTTCTTTACTCTGAGTTACGTTAGGGCCGGTACCGAACTTACTTGGAACTACAATTACGATATCGGCAGTGTTCCCGGGAAGGAGCTATCTTGTTATTGTGGTTCGAGTGAGTGTAAAGGTCGCttgttgtaa
- Protein Sequence
- MEETMDVEIIDDDTPPNESAKESDASKTADTTSNNDVVVLDDEVSPECETIDLVHSEMTGNTKCINYLCKGGDSMIEPPGFCLSFYRVKNKPNKKQQICTDCYDNAIEHYDKLAEALTTKGSLLDVELPFRNDVVEIEDSDSDEESMGDIHLDTETVQMLEEHFDSAMSAVMNKYDFDEQINKALNALNTRCDTVKDSFVEVKTMFKNIRTETDNMIFPNCLIGAPPISLIAAPDIPGKPLSETTNFENGGFWGNTLWVYPQLCCFFKILGLALPPLTMMKATTATVVSSSAITGDTDSNLIVLQEIKKDPDGFDAQSSFVGDPDAPPGNLPPRGQLLKSPLIVGEAYYANRSEIIGAWIKVTLKEIIVPGTRRDGQIYTNTMYVVAIENRQKIIRQKIVTGREIAYSLPANVQLDVGARVIAVFREVLLPEEARERVKKDVFYPGIVAEPLQSSKNGKWWITTVMSVDCSLVQMFFDASGRIEWIYRGSTRLNPMFKEEQAASNRLQHRQRMTRKANTTEPYVEYTRSDPQQPEQPPPQRSVARKSTSRPPCNNNNITYRVNHFLPIANPPREAPATKIVYYTPRRQKPKTNVYTPHSCAPKCKEFMYCSLSRLKGYSPLSKPLLCGFYRLMYKCKNRKCVLYKAPCGRTLRNMQEVHMYLRTTKSDLTVDLFDFNVYVRCLAEFMVEQKNILIKDLSQGKEECPITVVNYVNSAQLNFCNYSTKREPMEGVNLNTNTEFLTGCDCTDDCVDRQKCSCWQLTLQCLKYMDKDTDPESVGYQYRRLPEPIFSGIYECNRKCKCASTCLNRVVQNPLHHKLQIFQTDMKGWGIRCLNDIPQGSFICIYAGVLLTEDMANRDGKFYGDEYLAELDFIETAERTKEDYEEDPYHDEVERDSKSPHRSPEDSGPDDDEEDEHMRRTVDDRDFVPSFQAKRHSELDSGIRTRLRKRQEAVTVKQEKRAVIPSNMMDDDTVMISDDEDYVPREPSSFNPKQDSSLTEGGEGKYKSVRELFGTDEDVYIMDAKNTGNIGRFLNHSCSPNIFVQNVFVDTHDLRFPWVAFFTLSYVRAGTELTWNYNYDIGSVPGKELSCYCGSSECKGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01498889;
- 90% Identity
- -
- 80% Identity
- -