Dnoa006314.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dufourea novaeangliae
Gene Symbol
Hr39
Assembly
GCA_001272555.1
Location
NW:62059-109905[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 3 9.6e+03 -6.4 5.6 121 154 51 84 24 107 0.50
2 6 3 9.6e+03 -6.1 12.1 43 162 311 422 300 437 0.49
3 6 3 9.6e+03 -5.4 8.1 70 160 435 525 408 542 0.55
4 6 4e-08 0.00013 20.6 0.0 1 23 608 630 608 639 0.92
5 6 0.66 2.1e+03 -3.1 0.0 88 113 666 691 652 715 0.68
6 6 2.7e-70 8.8e-67 225.4 0.0 196 408 777 983 729 983 0.94

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCACAGGACCTGGTCCGGGACCGGGTCCCGGCTGGTGGCAAACAGCCTCGCAGTCTTGGAAGACCAGCTCCGTCGGGTCCTCTTCCTCGTCCGCTGGCCCCACTGCTCCAGACAGCTCCGCCTCCGTCTCTGCGTCCTGCACCACATCTACCTCCGGCCTGGCAACCACCACATCGACAGCTCCGCCGTCCAGTTGTTGTTCCTCAACTCCCGGAGGACATTCCTGCACCATCACCGCGGCTCGCACCACGGAGACGGGGAAAAACGTCTCCGTGACAACGATCAACGTACCGCCGAATCAAGACTTACACGATGGAAAAGGTATCTGCAAGTACCTTACCGGCCAGAACGGCGTCACGGTGTCGGTGGTGTCGAGCTGCGGTTCCGTTCTCGGATGCGGGAACACGAGCGTGGTGTCCACGACCGGAATCGGGACGAACGCCGTATCCCATAGCATAGGAATTGGTATCGGTGTCGGTGTCCTGGGTCAGAACGTGGACAACGACGCCGAGGACAGCGACGGCGAGATAAGCAAGATAGATTTCCGCGGGGTGAATTTACGGACGAAGAAGAAACGGGATGTGTCCGGGAACGGTGAGAAAATCGGGGACGGGGACGTCGACGATGGGAACGGTTGCTACGACGGTAACGATGCCACCCAACAGCAGCCGGAGAGGCCCATGTCGTGGGAAGGGGAATTGTCCGATCAAGAGATGTCTTCCAACACGATTACAAACCAAGACACGCACGAAGAGACATCGATGGAAGGTGTCCAGGTCTGCGGGTCGAGTCCCGGACCAATGGAGCAGAAGTTTCACATAAAACCGGAGCCAGATTTTCGATCCAGCCCGGGATTTGCGTTAGGTTCCTTCCACGATGCAGGATTGTCCCTGCCCCACGGTCAGCAGatgcagcagcagcaacagcaacaacaacagcaacagcgAAACATAGAAAGCATCGAGCAGACGCAGCAGAGCGAATTGCCTCTTCTCGTAGGAAAACTGCTCGGTGGCTATAATAGCTCCACCCCGAATCACAGTCCCGTGTTAAACCCAAGACATCATTTGACCAAACATAGCCACACGCGATCTCAGGTACCGTCACCGGATTCTGCGATTCACTCCGCGTACAGTGTGTTCAGCTCGCCGACGCAAAGTCCCCACGCAGCTCGACACTCTGCCTTAGGCGCAGGAAGCCCGGTCCCATCGTCTTCGCTCTCCCTCTCGCGACATAGCTTCAACAACTCAACCTCCTCGTTGTCGTTGTCGCTGTCGCACTCGCTCTCGAGGAACAATTCGGACGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTCAGTCCGCCCACGCATTCGCCCGTCCAGCAACCAAGACATCCGCAGCATCATCAGCATCAGGTAGCACAAGGAAGCCCCCTTCATCTGCCGGCGACGGCCTCGTCCGGTGTTCCTCATCATTATTCCACCACCGTGCCCGGTTCCGAGCTCTCCCCCGAAGGGCATCCAACCGGTGACGACCAGGAAGATTGTCGAATACCATCGGCCCCATCCGGTATTTCTACCAGGCAACAGTTGATCAATAGCCCTTGTCCAATATGCGGTGACAAGATCAGCGGTTTCCATTACGGAATCTTCTCCTGCGAGTCGTGCAAGGGATTTTTCAAACGCACCGTCCAGAACCGGAAGAATTATGTGTGCCTTAGGGGCGCCGGGTGCCCGGTCACCGTCGCCACCAGAAAGAAATGTCCGGCTTGTCGGTTCGACAAGTGCCTCAACATGGGTATGAAACTCGAGGCGATCAGGGAGGATCGTACCAGAGGCGGAAGAAGTACCTACCAATGTACCTACACCCTCCCAGCTAGCCTGGTCGGGAGCCCCGCTAGCGGCATGACCGGCGACAAACTAGGAGCTGGTGGAAATTGTAGTCCAGCTCCAGCTGGCAGCGAGCATTATTATTCCGTTAGACATCACTCGAATCATTCGCATAAAATGCAAGTGGTGCCGCAGCTTCTGCAGGATATCATGGATGTGGAGCATTTGTGGCACTACAATGATAACGATCGAATGTCCGGAGGACAGCCAGGAGGGAGTAACGTGTCCAGAAGCAACGATGGTATGTTGTTAGGGGGAGTCGGATCTGTAACGGGAAACGATGCTGGGTCCGGAGTCGAGGGTTCATCCAATGGGACTGCGGGGAATGGGAATTTGAGTAACAGAAGAGACAGCAGGTCTTGTTCCACCGTTCCCGGTGTTACCAACGACCAACGAGCGCCATCTATCAACAGCAATTCACCGTTGAGCAGCAATACGAACGGCAACTCGACTCAGCATCCCGATTTCCTGTCGAACCTCTGCAATATCGCCGATCATCGACTGTACAAGATAGTGAAGTGGTGCAAAAGTCTCCCattgttcaaaaatatttcgatcgaCGATCAGATTTGCCTGTTGATCAACTCCTGGTGTGAGTTGTTGCTCTTCTCGTGCTGCTTTCGCAGCATGAGCACTCCCGGTGAAATCAGAGTGTCTCTCGGCAAGTCGATTACTCTGGAACAAGCCAGGCAACTTGGCTTGGCGACCTGCATTGAGAGGATGCTCGCGTTCACCAATAATCTGAGAAGACTCAGAGTGGACCAGTACGAATATGTTGCGATGAAGGTAATAGTGCTGTTGACATCCGACACAAGCGAACTGAAGGAACCAGAGAAAGTGAGAGCATCTCAGGAGAAAGCCCTGCAGGCGTTGCAACAGTACACGATAGCAAGGTATCCTGAAATGCCTGCCAAGTTTGGCGAGCTGTTACTCAGAATCCCAGACTTACAAAGAACATGCCAGGCGGGGAAGGAGTTGTTAAGCGCGAAACGTGCGGAAGGGGAAGGTAGCTCGTTTAACTTGTTGATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence
MSEQNGPSEGTGPGPGPGPGWWQTASQSWKTSSVGSSSSSAGPTAPDSSASVSASCTTSTSGLATTTSTAPPSSCCSSTPGGHSCTITAARTTETGKNVSVTTINVPPNQDLHDGKGICKYLTGQNGVTVSVVSSCGSVLGCGNTSVVSTTGIGTNAVSHSIGIGIGVGVLGQNVDNDAEDSDGEISKIDFRGVNLRTKKKRDVSGNGEKIGDGDVDDGNGCYDGNDATQQQPERPMSWEGELSDQEMSSNTITNQDTHEETSMEGVQVCGSSPGPMEQKFHIKPEPDFRSSPGFALGSFHDAGLSLPHGQQMQQQQQQQQQQQRNIESIEQTQQSELPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVAQGSPLHLPATASSGVPHHYSTTVPGSELSPEGHPTGDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPASGMTGDKLGAGGNCSPAPAGSEHYYSVRHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRMSGGQPGGSNVSRSNDGMLLGGVGSVTGNDAGSGVEGSSNGTAGNGNLSNRRDSRSCSTVPGVTNDQRAPSINSNSPLSSNTNGNSTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00733987;
90% Identity
iTF_00763268;
80% Identity
iTF_00625528;