Basic Information

Gene Symbol
NCOR1_1
Assembly
GCA_001272555.1
Location
NW:2279421-2346036[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-08 5.8e-06 25.4 0.0 3 43 740 780 739 783 0.96
2 2 1.2e-15 6e-13 47.8 0.6 3 45 1217 1259 1216 1260 0.95

Sequence Information

Coding Sequence
ATGGAGACAGTGAGCAAGCAAGTCCAGGTAGTGAGCGGACTGGGGGTGGGGGGTCCAGTGGGCCCTGTGGGTCCAGTGGGGGGAGATTTGCATCACCATCATCATCCTCACCCCCACTCTCATCCTCCACACCCACATGCCCACCCCCACGGTCATCCTCACGGGGCCCATGGCCACTCTCTCGTCGGCGTAACGTCGACCCCTGGCAGGGGTCAGGCACAACCACCGGTCTCCCATAACCAACATTTACCCGCGAGATCTACTCCAGTACAGCTGCACAGGTCGCCGCAAAGTTACGTAAACATCAAGAGTAGCAGTCCCGTATCACCGAGAACGGTTGGATCAGGCGTGACGTACGTCCAGGGTGGTGCAGTTGCATCTTCCGCAGCTGCGGCGGCTGGAGCAGCTGGAACTGGGACTGCTGGAGGTCCTTCAATTGGTGGAGGCGGTGGCGGAAGTGTTAGCAACGCTGGTAATGCGAACAGTGGAACCAGTGTTGTTGGGGCTGGTGCTGGTGTCGTGGCCGTTGGGAACGTAGCACCACCCGGAAGTGGGAATAGCAGTGGTAACGGTAGCAGTGCCGGCGCGGGAAGCAACAGTGGGAGCGGTACAGTGGGTGGTGCACCAGGAGGTTACGTTGCTGTACCCATGGCTGGTGGTCTACGATACATCCATCCGTACCCACCGACGCCAACGTCGGCGTCGGTGCCAGCCGTTGTCACGGTGGTCACTTCAGCCTCGTCGGCGTCGACTCCTGTACCAGTTCCAGCTCCCGCGGTCGCACCTGCGAATTCACCCACAGTCAGTCAAACGCCACCACCATCGCTCTCGGGAACTGCTTACGCCCCGAGAGATGCATATCGCAGCGCCACCACGAATgtGAACGAGAGGATCGCTATCAGCGTGAGCAGCAGTCCTCTGTCGCAGATTGGAGTCGGTGTTGGAGTAGTTACGGGCGAATATGCGTCGGCAAGCAGTATCGTTAGTAGCATGGGTGGTGGAAGAGGAGACAGACCGAGGATATCTCTTTTGCCGCCCGCTTCGGTGACGCCGACACCTTCACCAACAGCTCCTTCAGACTATCAGCACGTGACCAATGCGAGGAATTCACGAATAGCCCTGATGCCCGTCCAGCCGGATCAGTATTGCAGCCGTACGGCCGTTGAAATGGCCAATCTGCAGGAGGCGCCACCCTTCAAGAAAATACGCTTGGCCCAACCAAGCCAAGTTCAGTTACAGTCCCAATCGCAATCTCGCTCTCAGAGCCTATCACCCGCCGACCCCTGCGGTAAACAAGAACACGTGGTGCAGTTGCAACAGCCGCTTAGGATAGACACTAGGGAGCAGCCCATCACGGGTGCGTATACACCGCAAACAGAAGCGATATCACCCACGCTTCCGGAACCGAACACGCAGGAAGACGCGCAATTTAGGAGTACCAAGGACGATCTTTTGCAGCAGATCGCCAAGGTCGACCGAGAGATTGCAAAAAGAGAGTCCCAGATAAATAAGCTTCGGAAAAAGTTGAAAGAATTGGAAGAGGCAGCGAACAAACCTCTGGAAGCCAGTGGTCTTAAACGACCAGTCGAGGAGCAGTCGCAACAACCAAAGCATCAATCTCTGGCACAAAAAATTTATGCTGACAATAGGAGAAAGGCAGAGGAAGCCCATAGGCTTTTAGAGAGGCTAGGTCCAAAAGTGGAGCTACCCTTGTATAATCAGCCGTCGGATACGAGTGTGTACCAAGAAAATCGTACGAAGCATCAAACATGTATGAGGGCCAGGCTTATAGCGAGGCTTCGAAGAGAACACGCCGAACGAGCGTCTCTTCATCGACAACAGTCTCGAACGTACGCTATTTTGGTGCAGGAATGGCATCGTAAGATAGAACGATTGGAAGCAACACAAAAGAGAAAGTCAAAAGAAGCGAAAAATCGTGAGTTCTTCGAGAAAGTGTTCCCCGAGTTGCGGAAACAGAGGGAAGATAAGGAACGTTTTAATAGAGTCGGTGCTCGTATCAAGAGCGAAGCTGATTTAGAAGAAATTATGGACGGCCTTCAAGAACAAGAGATGGAAGATAAGAAGATGCGTTCGTACGCAGTGATACCTCCTTTGTTATTGGATACAAAACAGAGACGAATCGCGTTTCAGAATCGAAATGGTCTACTTCAGCCGGAAGAATTAGAGGCTCTTCACAGTGAACGAAAGTTAATCAACGTATGGAGTCCTGTGGAGCACGAATTgtttaaagagaaatatttacaacatCCTAAGAACTTTGGAACGATAGCTCAATCTTTAGAACATAAGTCCGTTCCAGATTGCGTGCATCATTACTACCTCACTAAAAAAGCAGAAAATTATAAGCAGCTATTGCGAAAGTCGCGGCAACGAACACGTAGCTCTCGGAACAATCCTAATAATAAAGTAAATAATACCAGTTCAAGTATTGGACCTATAGACATTCTTACTACGGGTGTTACGACGAGGCTGCAACGTGAGCAGCAACAAAAAACACAAGAAAATCCGCAGAATAGTTCGACAGCAACGTCGACtacaacgacgacgaccacCACCACAACAGCATCGAACGTATCGACGAGCAATGCATCAACAATAGTGACCACTTCGACGACTTCTTTAAGTTCGACAACGTCGAGTATGTGCTTAACGACTGAATCCGTGATAACGTCAACGATAGCGACAACGACATCTATACTGAGTACCACGACGTCTTGTGTCACCCCGTTGATGACGTCGAACGCGAAGGATAACAGGGAAACcaacaaagaaaacaaagaaattaaaacgGAACCTAAGGAGTCGCATCTTATCAAAGTGGAGGTGAAGGAGGAACCGCAGTTGAGTTCTGAAACGTCAGGAAAGGATGTTAAAGTGATAATCGACGGAAAGagctcgtcgtcgtcgtcatcgttgtcgttgtcgttgttgtcgtcgtcgtcgtcgtcgccgtcatcgtcgtcgtcgacggcGGCGGTGTCGTCGTTGAGCGTGAACACGACGAACGCCACGGCGATACAGTCCGATTTCAAAGACACGAATAAAAAGAAGCCGGGTTGCAGGGAGGCGAACAGCGGCGGCGTAACCAGCGTCGGAGCCGTGAGTCGGAtaaaggagaagaagaaggataATCACGCGATGCCTATGGAGACCAGCGATGAAGAGGCACAATCGATGGACGCCATCGAAGGCAGCAGACAGATCGGACCACACGCATGCACAGTTTGCCAGAACGTAGTCGAAGGCAGCGCGCAAAGTCGGACCCTACCTAGAAGTCAAGCGTCCCAGTATGGACTTCGAGAAGATCAAGTAGTACCCGGTGCACGTGTATGTAACACCTGCCGGTGTAAAGCTGTCAGGGGACGGTATACCGCATGTCCTTTGCCCGGTTGCCCGAATTTGAACAACGCCAGCTCGAAGACCAGAGTGAAACGACTGAGAGCGTTGCCCGCCAAGTGGCTTGATCTACCGGCTGAGATTCGTGACCCGATTATCCAAGAGTTCCaaatacctAGCAATGTGACAAAATGCTGTTCAGCCTGCTTTAACCGAATATCTCGACGTCTAGCGCCGCACCTAACTGGTGGCAGCGAGGTCGCCGAAGACACAACCGATTCCTTAGTCCGGCAGTGGACGGACGAGGAACTGGAACAGCTCAGAAGAGCCCTTAGAGAACACGGCACCAACTGGGTAAAGGTCGCCGAACAGATCCCTGGGAAGACGAACCATCAATGCAAGAACTACTACTTCGCGTACCGAAAGAAACTTAGCCTGGATCAAGTGGTCGCCGAGTATTATCAATCTTTGGGCGAAGATAGGAGACCTTGCTTGACGGATGAAGAAGAGAGCGGGAGTAGTACGAGTAGCTGCGACGAGCTGGCGGTTCACGATTCAAGCGACACAGCCAGCGCAGGCAGCCCAGCGAATAATATGTCAAGCGGAACACCAGGAACACCAGGTGCATCCGCGTCTACGACTTTGCCTATATCTTTTCCACGAACGACAGACCAAAAGCTTGGCGACAAGCTGGCGGACATTGCTGTGGTATCTTTAGTACCACCGGTAAGCATAGGTTCGTCACAACAGTCTTCCACCAGCGGAAGTAGCAATGCTGCTTCAGCTAGCGCTAGAGAAGATTACGATAGTTCAGCCACGACGGCGGACGAAGGTCAGGGAGGTGCCGATTTAGAAAATAGTAGCGTCGTTGTAACCCTGACAACTGCCAACAATTCGACACAACTCCAGCAACACCAACAATCACATCAACAAGTTCCACCGCCTTCGCATTCGCCTCCATCAACCACCAGCAACTCCAATCCTCTAACCGTTAAAGATCTTATGCTTGGTGTTATCGAGATGCAATTGAAACGCAATCCAAACAGTCCAGCTAGTACCGGGGGTTCCTCGGTGCCAGTCAATTCTGGTACGCCAACTATATCCAGTATATTGAAGACCGATCACCGGAACGACATTACATTCGTGCGAGAATATAAGCCGTCAAATTCTATGGCAAACACCACTATGTCGAGGGACTTGAATTTGGCTACATTGTCGGTTGTGTCGGGTCCTCATCACGGACATCGTTCTGCTCCTAGTCCTCAACAAATTGGCCAAATGCAAGCAACAATTACCCCCTGTCCACCAGCGGCATCAAGCAGTCAGTCTTCATCGTCGGACTTGATTCCAAAGGAAGGATTAATCGTGATGCAAGTGCAACAAGCGCTGCGAGAGACCGAAGGCACCCTCGACTTGAGTATTAAAAAACCAAGGCAACAACAAGAATACAATCATTCCTTGCAGCCCATTCATAAGCCACCGACGGTTGCCCTCTATCGTCCAGAACCTTCTCCCGGCGCTTACTACCATCATCACGCTCATCCAGAGCAAAGCCGTAGTGCAAAAAGCCCATTGGTTTATGCTTCTTCCCCACGACCTCAGGCACCTTTGACACCTAAAATGAATAAGGTCGCCGTGCCGCCACCTCATCCAAAACTGTCACCCAAATTGAACAGTATGGGGACACCTGTTCACAAGAGTGGCTCCATCACGCACGGTACACCCGTGTCCAGCGCGCGTTACGAGGGTCTTCTCAGACAAATGACGCCTCCAGGAAACCCTGTCAGTGCCACTGGCACGCAGAACGTTACCAGCGGCACCGGCGTCGTTAATGCCTCCAATAATCAAGGACCTAAAGAAACGGGTTCCATAACCCAAGGCACTCCTGTCCATCCCTTCGCGGTGGACAAACGCGCTCCCATGTACGATTATCACAGAACTATCAGACACTCGCCCGTAACGACAGGCAACATTCCTGGACAAGGCCAAAGTCAAGCAGGAACCGCTGCAGTCGTAGTGACACATAGTAATCAATACAATTCTTATCCCGGGCGGCCACCACCTAGCTACACGATGGAGCAACAGCTATCCTCCAGACAGATCATCATGAACGACTACATAACCAGCCAACAGATGCACGCGCGCAGCCGAAGTGTTGGCACGTCGGAAGGCAGTAACAAAAACGAACCGCCATCGACGTTGTACTACACAAGCACTCCGCCCCCGCAGTCGCATACGCAACCCCGTCAGGGAGTCATCCAGAGGCATAATCCTCAGAAACAGATTCACTACCCACCTCCACCACCGGGACTGGAAGCCTTTTCCAGTTTAGTGGATGTCGCCGTGCAACAACCGAGTCTTCCAGTTCCCCATCCGCACAGCCACCCCGCGTCTGTTAGCAGCAGCCACGAGGGTCTCGGCAAGACCATGGCGGACAGGCTATTAGCCGACCGTTATGGTGATAAGCATCGCTTGGCTATGCATCAGGCGGATCACAGAATGACGGTGGCTCATCATCACCAACGGGATCGAGACAGAGAACGCGATTTGGTTCATCTACGCGAGAAAGAAGAGTATAGGTTGCAACGGGAAAAGGAAATTCAGCAGCAAGAGCACAGATTAGCTCAGCAGAGAGAAAAAGATGCGCAACATGCTGAGCACCGATTATCTATgcaacagagagagaaagatataCAACACCCCGATCACCGTCTTACCGTCCATCAGCAGAGAGAAAAGGAAATACACCAGCAAATGGCTGCGGCCGCTGCACAGCGAGAGAAGGAACATCAGGAGCATCGATTGGCCGTGCAACAGCAAAGAGAAAGGGACATGCATAtacaacagcaacagcaacagcaacaacagcaacagcaacagctTCAACAGCATATTCAGCAGCAGCAAAGAATGGAAGCTGAGAGGAGGCATATGGCGCAGTTATATAGAGaccagcaacaacaacagcttGATAGGGACGCTAGCAGGTTAATGAACAGTGGGTTTACTCAATCATCGAGACATCAACAACCGCAGCAAtcgcagcagcaacagcagcaatCATCGTCTAGGCAAAGTCAGTCCTCCTCAAGCCAGCCGCAGAACGAGCCAGCGTCTACCTTAACCGCCGCCAGTTTAATAGATGCTATTATAACTCACCAAATTAATCAGAGCGTTGAAAACACTAGTGGAAATTCCCAGCCGCAACGACCGGGCGATCGTCTTTTCCAGGGATTCCATCGGGAAGCACCGGCAGAACCTAATGGGATGGCTCATAGTCCTGCTGGCGAAGGTAACGGAGGGAATAGCGGAGCGGGAAGCGGTAACGGAAGTGGAAACAAGCCGATTACTCTTGGAGAACATGTGGACCACATTGTTTCTAAAGATTACGGCCCTCCGCATTCCTCGTATAGATCTTATAGCGGGTACCAAATTTCGGAAGATCAATGGAAGAGGCGAAAAGCCAACGAGTCCGAATCCGTTAAAGCTGGAGATGAACGTCAGATAATCCGTGTGACGCAACAGCAGtcacaacaacagcagcagcaacaacagcaacaacaacaacagcaacagaCTGCGTCCGTGGTAGGAAAGCAACAGTTCCATTCAGTCGAGCCTGTGTCGCCACCGGAAGCAGGTACCAATCATTATGGACGTCGTTTGTACGAAACAACCACTGCCACTTCGACTTCCGGAACCCCTTCCAACAAGCCCCATCTTTCGCCACTGGATTACGTAAAGAATAAGATCGTCGAAGTAATGCGTACATCCGAGGACGATAAAGGTGGTAGCACAGGTGACAGGAACGGAGGGAACGTTACTAGTGGAGAGAAGGACGAAAAGATAGGAGGAAATATAGAGAGTCCTTCCAGCGGAGAGATGATGGTCGACGAGGCACCGAATCAAGCTCCGCAACCTCCTGCACCAGCTCCTACAACCACCTTCTATCCGTTCAGTGCGTTAGGAGTGCATACTGGCCCGCCACCAGCGCCGCCACCCCCGACTTCCGGTTCCGCTTCCGTAACTAAGTCGGAACAAATGCAAGCCGAGCCGGCGCCGTTGCTATCTGCCCAGTACGAACCACTTTCTGACGAGGATTGA
Protein Sequence
METVSKQVQVVSGLGVGGPVGPVGPVGGDLHHHHHPHPHSHPPHPHAHPHGHPHGAHGHSLVGVTSTPGRGQAQPPVSHNQHLPARSTPVQLHRSPQSYVNIKSSSPVSPRTVGSGVTYVQGGAVASSAAAAAGAAGTGTAGGPSIGGGGGGSVSNAGNANSGTSVVGAGAGVVAVGNVAPPGSGNSSGNGSSAGAGSNSGSGTVGGAPGGYVAVPMAGGLRYIHPYPPTPTSASVPAVVTVVTSASSASTPVPVPAPAVAPANSPTVSQTPPPSLSGTAYAPRDAYRSATTNVNERIAISVSSSPLSQIGVGVGVVTGEYASASSIVSSMGGGRGDRPRISLLPPASVTPTPSPTAPSDYQHVTNARNSRIALMPVQPDQYCSRTAVEMANLQEAPPFKKIRLAQPSQVQLQSQSQSRSQSLSPADPCGKQEHVVQLQQPLRIDTREQPITGAYTPQTEAISPTLPEPNTQEDAQFRSTKDDLLQQIAKVDREIAKRESQINKLRKKLKELEEAANKPLEASGLKRPVEEQSQQPKHQSLAQKIYADNRRKAEEAHRLLERLGPKVELPLYNQPSDTSVYQENRTKHQTCMRARLIARLRREHAERASLHRQQSRTYAILVQEWHRKIERLEATQKRKSKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSPVEHELFKEKYLQHPKNFGTIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNTSSSIGPIDILTTGVTTRLQREQQQKTQENPQNSSTATSTTTTTTTTTTASNVSTSNASTIVTTSTTSLSSTTSSMCLTTESVITSTIATTTSILSTTTSCVTPLMTSNAKDNRETNKENKEIKTEPKESHLIKVEVKEEPQLSSETSGKDVKVIIDGKSSSSSSSLSLSLLSSSSSSPSSSSSTAAVSSLSVNTTNATAIQSDFKDTNKKKPGCREANSGGVTSVGAVSRIKEKKKDNHAMPMETSDEEAQSMDAIEGSRQIGPHACTVCQNVVEGSAQSRTLPRSQASQYGLREDQVVPGARVCNTCRCKAVRGRYTACPLPGCPNLNNASSKTRVKRLRALPAKWLDLPAEIRDPIIQEFQIPSNVTKCCSACFNRISRRLAPHLTGGSEVAEDTTDSLVRQWTDEELEQLRRALREHGTNWVKVAEQIPGKTNHQCKNYYFAYRKKLSLDQVVAEYYQSLGEDRRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPANNMSSGTPGTPGASASTTLPISFPRTTDQKLGDKLADIAVVSLVPPVSIGSSQQSSTSGSSNAASASAREDYDSSATTADEGQGGADLENSSVVVTLTTANNSTQLQQHQQSHQQVPPPSHSPPSTTSNSNPLTVKDLMLGVIEMQLKRNPNSPASTGGSSVPVNSGTPTISSILKTDHRNDITFVREYKPSNSMANTTMSRDLNLATLSVVSGPHHGHRSAPSPQQIGQMQATITPCPPAASSSQSSSSDLIPKEGLIVMQVQQALRETEGTLDLSIKKPRQQQEYNHSLQPIHKPPTVALYRPEPSPGAYYHHHAHPEQSRSAKSPLVYASSPRPQAPLTPKMNKVAVPPPHPKLSPKLNSMGTPVHKSGSITHGTPVSSARYEGLLRQMTPPGNPVSATGTQNVTSGTGVVNASNNQGPKETGSITQGTPVHPFAVDKRAPMYDYHRTIRHSPVTTGNIPGQGQSQAGTAAVVVTHSNQYNSYPGRPPPSYTMEQQLSSRQIIMNDYITSQQMHARSRSVGTSEGSNKNEPPSTLYYTSTPPPQSHTQPRQGVIQRHNPQKQIHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHSHPASVSSSHEGLGKTMADRLLADRYGDKHRLAMHQADHRMTVAHHHQRDRDRERDLVHLREKEEYRLQREKEIQQQEHRLAQQREKDAQHAEHRLSMQQREKDIQHPDHRLTVHQQREKEIHQQMAAAAAQREKEHQEHRLAVQQQRERDMHIQQQQQQQQQQQQQLQQHIQQQQRMEAERRHMAQLYRDQQQQQLDRDASRLMNSGFTQSSRHQQPQQSQQQQQQSSSRQSQSSSSQPQNEPASTLTAASLIDAIITHQINQSVENTSGNSQPQRPGDRLFQGFHREAPAEPNGMAHSPAGEGNGGNSGAGSGNGSGNKPITLGEHVDHIVSKDYGPPHSSYRSYSGYQISEDQWKRRKANESESVKAGDERQIIRVTQQQSQQQQQQQQQQQQQQQTASVVGKQQFHSVEPVSPPEAGTNHYGRRLYETTTATSTSGTPSNKPHLSPLDYVKNKIVEVMRTSEDDKGGSTGDRNGGNVTSGEKDEKIGGNIESPSSGEMMVDEAPNQAPQPPAPAPTTTFYPFSALGVHTGPPPAPPPPTSGSASVTKSEQMQAEPAPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2