Basic Information

Gene Symbol
NCOR1
Assembly
GCA_001263275.1
Location
NW:4555808-4624863[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.6e-08 3.4e-05 23.0 0.0 3 43 751 791 750 794 0.96
2 2 5.1e-15 2.6e-12 45.8 0.6 3 45 1168 1210 1166 1211 0.95

Sequence Information

Coding Sequence
ATGGAGACAGTGGGCAAGCAAGTCCAGGTAGTGAGCGGACTAGGGGTGGGAGGTCCGGTGGGCCCTGTGGGTCCAGTGGGGGGAGATTTGCATCACCATCATCATCCTCATCCCCACTCTCATCCTCCACACCCACACGCCCACCCCCACAGTCATCCTCACGGGTCCCATGGCCACTCACTGGTCGGCGTAACGTCGACCCCTGGCAGGGGTCAGGCACAACCACCGGTCTCGCATAACCAGCATTTACCCGCGAGATCTACTCCGGTACAGTTGCACAGGCCAGCGCAGAGTTACGCAAACATCAAGAGCAGCAGTCCTGTGTCTCCAAGAACGATAGGAGCTGGAGTGACGTACGTGCAGGGTGGAGCAGCTGCATCTTCTGCGGTGGTGGCTGCGGCAGCAGCAGCGGGAACGGCCGGAAGTGGAAGTGCCGGGGGTCCTTCAATCAGCGGCGGAGGTGGTGGcagtggcggcggcggcggtggtgtGAACAACACCGGTGGCGCGAACAGCGGAACCGGAGTCATCGGGGCTGGAACTGGTGGCGGTGCCGTAGGAAACATACCAGCAGCGGGAAGTGGGAACAGCAGCGGTACCGGTAATAGTGGTGGTGCGGGGAATAACAGTGGCGGGAACGCCGGTGCAGTGCCTGGTGCACCAGGAGGTTACGTTGCTGTGTCCATGGCCGGTGGTCTGCGGTACATCCACCCGTATCCATCGACGCCGACGTCGGCGTCGGTGCCGGCTGTAGCGACGATGGTCACCTCGGCCTCGTCAGCATCGACTCCCGTACCAGTTCCAGCACCTGCGGCCGCACCTGCGAATCCGTCTACAGTTAGTCAAACGCCACCACCATCACTCTCAGGAACTGCTTATGCCGCGAGAGATGCATATCGCAGCGCCAACACGAATGTGAATGAGAGGATCGCCATCAGCGTGAGCAGCAGTCCTCTGTCACAGATAGGAGTCGGTGTTGGTGTAGTTACAGCCGAATATGCCGCGAATAGCGGTATAGGTAGTGGCATGACCGGTGGAAGAGGGGATAGACCGAGGATATCTCTTTTGCCACCTGCTTCGGTGACGCCGACACCTTCACCAACAGCGTCCGACTATCAGCACGTGTCCAGTGCAAGAAATTCACGAATAGGCCTGATGCCCGTCCAGCCGGAACAGTATTGCAGCCGTACGGCCGTTGACATGGCCAACCTGCAGGAGGCGCCGCCCTTTAAGAAGATACGCCTCAGTCAACCGACTCAGGTTCAATTGCAATCCCAGTCACAATCTCGCTGTCAGAGTTTGTCGCCCGCTGACCCGTGCATTAAACAGGAGCATGTGGTACAGTTGCAACAGCCACTTAGGATAGACACTAGGAAGCAGTCAACTACAGGAGTGTATACGCCGCAAACAGAAGCAATTTCACCTACGCTTCCGGAACCGAATACACAAGAAGATGCGCAGTTTAGAAGTACTAAGGACGATCTTCTACAACAAATCGCCAAGGTCGACAGGGAGATTGCAAAAAGGGAGTCTCAGATAAATAAGCTtcggaaaaaattaaaagaattagaaGAAACGGCTAACAAACCTCTGGAAGCCAGTGGTCTTAAACGACAGGTTGAAGAACAATCCCAGCAACCAAAGCATCAGTCTCTGGCACAAAAAATTTATGCTGAAAATAGGagAAAGGCAGAAGAAGCTCATAGACTCCTAGAGAGGCTGGGTGCAAAAGTGGAACTACCTTTGTACAATCAGCCATCAGATACAAGTGTGTACCAAGAGAATCGAACAAACCATCAAACGTGTATGAGAACAAGGCTTATAGCGAGGCTTCGACGGGAACATGCTGAACGCGCATCTCTTCATCGACTACAGTCACAAACGTATGCTATTTTGGTGCAGGAGTGGCATCGTAAAGTAGACCGATTGGAAGCAACGCAGAAAAGGAAGTCGAAAGAAGCGAAGAATCGCGAATTCTTCGAGAAAGTATTTCCAGAGTTGCGAAAACAAAGGGAAGACAAGGAGCGTTTTAATAGAGTCGGTGCTCGTATCAAGAGTGAAGCTGATCTAGAAGAAATTATGGACGGCCTTCAAGAGCAAGAGATGGAAGATAAAAAAATGCGTTCGTACGCAGTAATACCTCCTTTGTTATTGGATACAAAACAGAGACGAATTGCATTTCAAAATCGAAATGGTCTTCTTCAGCCAGAAGAATTAGAAGCTCTTCACAGTGaacgaaaattaatcaacGTATGGAGTTCTGTGGAgcatgaattatttaaagaaaaatatttacaacatCCTAAAAACTTTGGAACGATAGCTCAATCTTTAGAACATAAGTCCGTTCCAGATTGTGTGCATCATTACTACCTCActaaaaaagcagaaaattatAAGCAGCTCTTGCGAAAGTCGCGGCAACGAACACGTAGCTCTCGGAATAATCCTAATAATAAAGTAAATAATACCAGTTCGAGTATTGGAACTCTAGACATTTTAACTACGGGTGTTACGACAAGGTTGCAACGTGAGCAACAGCAGAAAACACAAGAGAATCCTCAGAATAATTCCGCGGCGACATCaaccacgacgacgacgacaaccaCGACTACGTCGAGTATATCGACGGCTGTTGCGACAACAATAGTGACCACTTTGACGACTCCTTTAAGTTCATCAACGTCGAGTATATGTTTAACGACAGACTCCGTAATAGCATCAACGACAGCTACGTCATCTGTGCTGAGTACCACGACATCGTCTATCACGACGTCATCGATGACAACAAATACGAAGGATAATAGAGAAACcagtaaagaaaataaagaaaataaaatggagTTAAAGGAACCGCATCTTATCAAAGTGGAAGTGAAGGAAGAGCCGCAGTTAAGTTCCGAAACAGTATCAGGAAAAGACGTGAAAGTAATGGAGGCAAATAACAGTGCCGGTGGTGGCGGCGTGGCAGCCACGAGCAGgataaaggaaaagaaaaaagataatcACGCTACACCTATGGAAACCAGCGACGAGGAGGCCCAATCCATGGACACCATTGAAGGTGGTAGACAGATTGGCCCCCACGCGTGCACGGTTTGTCAGAACATCGTCGAAGGAAACACGCAGAGCAGGACATTGCCACGAAGTCAAGCGTCCCAGTATGGGCTGCGGGAGGACCAGGTCGCACCTGGTGCACGCGTGTGTAATACCTGTAGATGCAAGGCCCTCAGAGGACGATGCATCACGTGTCCGTTGCCCGGCTGTCCGAATTTGAACAACGCCAGCTCGAAAACAAGAGTGAAGAGGTTGCGAGCTTTGCCCGCCAAGTGGCTCGATTTACCAGCGGAACTTCGTGATCCTATCATACAAGAATTTCAAATACCGAGTAACACGACAAAATGTTGCTCGGCCTGTTTCAATCGAATATCTCGTCGATTGGCGCCTCATCTGACCGGTGGTACCGAGGTACCCGAGGATACAGCCGATTCCCTCGCTCGACAATGGACcgacgaggaactggaacAACTGAGAAGAGCCCTTCGAGAACACGGTACCAACTGGTTGAAGGTTGCCGAGCAGATACCAAGTAAAACGAACCACCAGTGTAAGAATTACTATTTCGCCTATCGGAAGAAGCTGAGCCTAGATCAAGTTGTCGCGGAGTACTATCAGTCGTTAGGTGAAGAGAGGCGACCTTGCTTGACGGATGAAGAGGAAAGTGGCAGTAGTACAAGTAGCTGTGATGAACTGGCGgtcCATGATTCAAGTGATACAGCCAGTGCAGGTAGTCCAGCGAATAATATGTCCAGTGGAACACCAGGAACACCGGGTGCCTCGGCATCCTCGAATCTGTCGATGACCTTTTCGCGATCGACTGACCAGAAACTTGGCGAAAAGTTAGCCGATATCGCTGTGGTATCTTTAGTACCGCCGGTGAGCATAGGTTCATCGCAACAGTCTTCCACCAGTGGAGGTAGCAACGCTGCATCGGCTGGCACTAGAGAAGATTACGATAGTTCTGCCACGGAGACGGCGGACGAAGGTCAGGGAGGTACCGATTTAGAGAACAATAGTGTAGTTGTCACGCTGACAACTGCCAACAGTTCGACACCTCTACAGCAACAACACCAGCAGACGCATCAACAAGTTCCACCGCCTTCACATTCGCCACCATCCACCACCAGTAACTCGAATCCCCTAACCGTGAAGGATCTTATGCTCGGTGTCATCGAGATGCAACTGAAACGCAATCCGAATAGTCCGGCTGGTACCGGTGGTTCCTCGGTACCTGTCAATTCTGGAACACCAACGATATCCAGTATACTGAAGACAGATCATAGAAACGATATCACGTTTGTAAGAGAATACAAACCGTCGGCCACTATAGCAAACACTAGTATGCCAAGAGACTCGAATTTAGCTACTTTATCAGTGGTATCTGGCCCTCACCATGGGCACCGTTCTGCTCCTAGTCCTCAGCAAATTGGTCAAATGCAAGCAACGATTACTCCGTGCCCACCAGTACCATCGAGCAGCCAGTCGTCAACATCAGACATATTACCAAAGGAAGGATTGGTCGTGATGCAAGTACAGCAAGCGCTACGGGAAAGCACAGAGGGTACCCTGGATCTAAGTATCAAAAAACCAAGGCAGCAACAAGAATACAATCATTCCCTGCAAACGCTTCATAAGCCATCAACGGTTACTCTCTATCGGCCAGAACCTCCTCCAGGTGCTTACTATCATCCTCATGCTCATCCAGAACAAGGTCGCGGTGCTAAAAGTCCTTTGGTGTACGCGTCTTCACCACGACCTCAAGCACCTCTTACACCCAAAATGAACAAGGTTGCTGTACCACCGCCACATCCTAAGTTGTCACCCAAGTTAAGCGCTATAGGGACGACGAGTNNNNNNNNNNNNNNNNNNNNNNNNNGCACACCTGTATCCAATGCTCGCTACGAGGGTCTCCTCAGACAGATGACTCCGCCAGGAAACCCTGGTAGTAACGCAGGAACACCTAATGTCTCCAGTGGTGCAAGTGCTGTAAATGTTTCCAGTAATCAAGGACCTAAAGAAACGGGATCCATAACTCAGGGTACCCCTGTTCATCCTTTCGCAGTGGATAAGCGTGCGCCAATATATGATTATCATAGAACCATTAGACATTCGCCTGTGACAACGGGTAACATTCCCGGACAAGGTCAGACTCAACCCGGAACGGCTGCGGTGGTGGTGACCCATAGCAATCAGTACAATTCTTATTCAGGACGGCCACCTCCTAGTTACACTATGGAGCAACAATTATCGTCGAGGCAGATTATTATGAATGATTATATAACCAGTCAGCAGATGCACGCGCGTAGTCGAAGTGTTGGCACGTCTGAAGGTAGCAACAAGAATGAGGCACCATCAACGTTGTATTACACCAGCACTCCTCCACCACAGACGCATACGCAGCCTCGGCAGGGAGTGATACAGAGGCACAATCCGCAGAAACCTATGCACTATCCACCACCGCCACCAGGGCTGGAGGCGTTTTCCAGCTTGGTAGACGTTGCTGTACAGCAACCAAGTCTTCCGGTTCCCCATCCACATAGCCATCCTGTATCTGGCAGTAGCAGTCACGAGGGTCTTGGTAAGACCATGGCGGACAGATTATTAGCGGATCGCTATGGAGATAAGCATCGTTTAGCCATGCATCCGGAGCACAGAATGGCTGTGGCTCATCATCATCAgcgagatagagaaagagaacgagaagaatatatattacaaagagaaaaagggattCAACAGCAGGAACATAGGATGGGTCAGCAGAGAGAAAAGGATGTTCAACATGCTGAACATAGACTGTCGGTACAACAACGAGAGAAGGATATACAGCACACTGATCATCGTCTTACCGTCCAtcaacagagagagaaggagattCATCAACAAATGGCAGTGGCTGCAGCTCAACGCGAGAAAGAACTCCAGGAGCATCGCTTAGCAGTACAACagcaaagagaaagagatctGGCACATTTACAACAGCAccaacagcagcaacagcaacagctTCAACAACATATGCAACAGCAACAGAGGATGGAAGCTGAGAGGAGACATATGGTCCAACTGTACAGAGatcagcaacagcagcagcagttGGACAGGGATAGTAGGTTAATAAGCAGTGGATTTACACAATCTTCTAGGCTTCAGCAACCACAACAATCccagcagcaacaacagcaacagcagcaatCATCCTCCAGACAAAGCCAATCCTCCAGTCAGCAGCAAAATGAATCTGCATCTACGTTAACTGCCGCCAGTCTGATAGATGCTATTATAACACACCAAATTAATCAGAGCGTTGAGAATACTAGTGGAAATTCTCAGCCACCTCGACCTGGTGATCGTCTTTTCCAGGGATTTCACCGGGAAGCTCCAGTAGAACCTAACGGAATGGCCCATAGTCCTGCTGGTGAGGGGAACGGTGGCAACAATGGAACGGGGAATGCGAATGGAAACGGAAGTGGAAATAAACCGATCACTCTTGGAGAACACGTTGATCATATTGTTTCTAAAGATTATGGTCCTCCACATTCCTCATATAGATCGTATAGTGGATATCAAATCTCGGAAGATCAGTGGAAAAGACGAAAAGCTAATGAACCTGATTCCGTTAAGGCTGGGGACGAGCGCCAGATAATTCGAGTTACGCAGCAACAAtcgcaacaacaacaacaacaacaacagcagcagcagcatcaACATCAGCAGGCAGCGGCATCAGTAGGAAAGCAACAGTTCCACTCGGTCGAGCCTGTTTCACCACCAGATGCAGGTACCAATCATTACGGACGTCGCCTATACGAAACAACCACTGCCACATCGACTTCCGGAACTCATTCTAACAAGCCGCACCTGTCGCCCCTGGATTATGTTAAGAATAAGATCGTAGAAGTGATGCGTACATCTGAGGATGACAAAGGTGGTAGCACAGCCGACAGAAACGGTGGGAACGTGACAAGCGGtgaaaaagacgaaaaaattgtaggaaaCGTTGAAAGTCCCTCGAGTGGAGAGATGATGGTCGACGAGACACCGAATCAAACTCCACAACCACCCGCGCCAGCACCCACCACCACCTTTTATCCGTTCAGTGCGCTAGGCGTGCATACTGGTCCGCCGCCAGCGCCACCACCTCCAACTTCTGGATCCACCTCTGTCAAGTCCGAACAGATGCAAGCCGAGCCGGCGCCGTTGCTTTCCGCGCAGTATGAGCCACTATCTGACGAGGATTGA
Protein Sequence
METVGKQVQVVSGLGVGGPVGPVGPVGGDLHHHHHPHPHSHPPHPHAHPHSHPHGSHGHSLVGVTSTPGRGQAQPPVSHNQHLPARSTPVQLHRPAQSYANIKSSSPVSPRTIGAGVTYVQGGAAASSAVVAAAAAAGTAGSGSAGGPSISGGGGGSGGGGGGVNNTGGANSGTGVIGAGTGGGAVGNIPAAGSGNSSGTGNSGGAGNNSGGNAGAVPGAPGGYVAVSMAGGLRYIHPYPSTPTSASVPAVATMVTSASSASTPVPVPAPAAAPANPSTVSQTPPPSLSGTAYAARDAYRSANTNVNERIAISVSSSPLSQIGVGVGVVTAEYAANSGIGSGMTGGRGDRPRISLLPPASVTPTPSPTASDYQHVSSARNSRIGLMPVQPEQYCSRTAVDMANLQEAPPFKKIRLSQPTQVQLQSQSQSRCQSLSPADPCIKQEHVVQLQQPLRIDTRKQSTTGVYTPQTEAISPTLPEPNTQEDAQFRSTKDDLLQQIAKVDREIAKRESQINKLRKKLKELEETANKPLEASGLKRQVEEQSQQPKHQSLAQKIYAENRRKAEEAHRLLERLGAKVELPLYNQPSDTSVYQENRTNHQTCMRTRLIARLRREHAERASLHRLQSQTYAILVQEWHRKVDRLEATQKRKSKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHELFKEKYLQHPKNFGTIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNTSSSIGTLDILTTGVTTRLQREQQQKTQENPQNNSAATSTTTTTTTTTTSSISTAVATTIVTTLTTPLSSSTSSICLTTDSVIASTTATSSVLSTTTSSITTSSMTTNTKDNRETSKENKENKMELKEPHLIKVEVKEEPQLSSETVSGKDVKVMEANNSAGGGGVAATSRIKEKKKDNHATPMETSDEEAQSMDTIEGGRQIGPHACTVCQNIVEGNTQSRTLPRSQASQYGLREDQVAPGARVCNTCRCKALRGRCITCPLPGCPNLNNASSKTRVKRLRALPAKWLDLPAELRDPIIQEFQIPSNTTKCCSACFNRISRRLAPHLTGGTEVPEDTADSLARQWTDEELEQLRRALREHGTNWLKVAEQIPSKTNHQCKNYYFAYRKKLSLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPANNMSSGTPGTPGASASSNLSMTFSRSTDQKLGEKLADIAVVSLVPPVSIGSSQQSSTSGGSNAASAGTREDYDSSATETADEGQGGTDLENNSVVVTLTTANSSTPLQQQHQQTHQQVPPPSHSPPSTTSNSNPLTVKDLMLGVIEMQLKRNPNSPAGTGGSSVPVNSGTPTISSILKTDHRNDITFVREYKPSATIANTSMPRDSNLATLSVVSGPHHGHRSAPSPQQIGQMQATITPCPPVPSSSQSSTSDILPKEGLVVMQVQQALRESTEGTLDLSIKKPRQQQEYNHSLQTLHKPSTVTLYRPEPPPGAYYHPHAHPEQGRGAKSPLVYASSPRPQAPLTPKMNKVAVPPPHPKLSPKLSAIGTTSXXXXXXXXXTPVSNARYEGLLRQMTPPGNPGSNAGTPNVSSGASAVNVSSNQGPKETGSITQGTPVHPFAVDKRAPIYDYHRTIRHSPVTTGNIPGQGQTQPGTAAVVVTHSNQYNSYSGRPPPSYTMEQQLSSRQIIMNDYITSQQMHARSRSVGTSEGSNKNEAPSTLYYTSTPPPQTHTQPRQGVIQRHNPQKPMHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHSHPVSGSSSHEGLGKTMADRLLADRYGDKHRLAMHPEHRMAVAHHHQRDREREREEYILQREKGIQQQEHRMGQQREKDVQHAEHRLSVQQREKDIQHTDHRLTVHQQREKEIHQQMAVAAAQREKELQEHRLAVQQQRERDLAHLQQHQQQQQQQLQQHMQQQQRMEAERRHMVQLYRDQQQQQQLDRDSRLISSGFTQSSRLQQPQQSQQQQQQQQQSSSRQSQSSSQQQNESASTLTAASLIDAIITHQINQSVENTSGNSQPPRPGDRLFQGFHREAPVEPNGMAHSPAGEGNGGNNGTGNANGNGSGNKPITLGEHVDHIVSKDYGPPHSSYRSYSGYQISEDQWKRRKANEPDSVKAGDERQIIRVTQQQSQQQQQQQQQQQHQHQQAAASVGKQQFHSVEPVSPPDAGTNHYGRRLYETTTATSTSGTHSNKPHLSPLDYVKNKIVEVMRTSEDDKGGSTADRNGGNVTSGEKDEKIVGNVESPSSGEMMVDETPNQTPQPPAPAPTTTFYPFSALGVHTGPPPAPPPPTSGSTSVKSEQMQAEPAPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2