Basic Information

Gene Symbol
NCOR1
Assembly
GCA_000220905.1
Location
NW:283301-418087[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.6e-08 3.5e-05 23.0 0.0 3 43 751 791 750 794 0.96
2 2 1.8e-15 1.4e-12 46.7 0.3 3 45 1210 1252 1208 1253 0.95

Sequence Information

Coding Sequence
ATGGAGACAGTGGGCAAGCAAGTCCAGGTAGTGAGCGGACTGGGGGTGGGGGGTCCGGTGGGCCCTGTGGGTCCAGTGGGGGGAGATTTGCATCACCATCATCATCCTCACCCCCACTCTCATCCTCCACACCCACACGCCCACCCCCACGGTCATCCTCATGGGACCCATGGCCACTCACTGGTCGGCGTAACGTCGACCCCTGGCAGGGGTCAGACGCAACCACCGGTCTCGCATAACCAGCATTTACCCGCGAGATCTACTCCAGTACAGCTGCACAGGCCAACACAGAATTACGTAAACATCAAGAGCAGCAGTCCGGTGTCTCCGCGAACGGTAGGAGCAGCGGTTACGTATGTCCAGGGTGGTGCAGCCGCATCTTCAGCGGCGGCAGCAGCGGGGACAGTTGGAAGTGGAACTGCTGGAGGTCCTTCAATCGGCGGAGGCGGTGGCGGTAGCGGCGGCGGTGGCGGCGGTGTTGGTGTTGGTGTTAGCAACGCGAGTGGCGCAAACAGCGGAACCGGAGTCGTTGGGGCTGGAGCTGGTGCTGCTGGTGCTGTAGGGAACGTAGCTGCAGCCGGAAGTGGAAATAGCAGCGGTACCAGTAACAGTGCCGCCGGTGCAGGGAGTAATAGTGGCGGGAACAGTGGTACAGTGGGTGGCGCACCAGGAGGTTACGTTGCTGTACCCATGGCCGGTGGTTTACGATACATTCATCCGTATCCACCGACACCGACATCGGCGTCGGTGCCAGCTGTAGCAACGGTCGTCACATCGGCTTCGTCGGCACCGACTCCAGTACCAGTTCCACCACCTGCGACCGCACCTGCGAATCCACCTACAGTCAGTCAAACGCCACCACCATCGCTTTCGGGAACTGCTTATACCGCCAGAGATGCATATCGCAGCGCCACCACCAATGTGAACGAAAGGATCGCTATTAGCGTGAGCAGTAGTCCTTTATCGCAAATAGGAGTCGGTGTTGGAGTAGTTACAGCCGAATATGCGGCGAATAGCGGTATAAGTAGTGCCATGGCTGGTGGAAGGGGGGATAGACCGAGGATATCTCTTTTACCACCTGCTTCGGTGACGCCGACACCTTCGCCGACAGCGCCAGATTATCAGCACGTGTCCAGTGCAAGAAATTCACGAATAGGCCTGATGCCCGTCCAACCGGATCAGTATTGCAGTCGTACGGCCGTTGAGATGGCCAACCTGCAGGAGGCGCCGCCCTTCAAAAAAATACGCCTGGTTCAACCAACCCAAGTTCAATCACAGTCCCAGTCGCAATCTCGCTGTCAGAGTTTGTCACCTGCTGACCCCTGTGGAAAACAAGAGCACGTGGTGCAGTTGCAGCAACCACTTAGGATAGACACTAGGCCGACTACAGGAGTGTACACGCCGCAAACAGAAGCGATATCACCGACGCTTCCGGAACCGAATACACAGGAAGATGCGCAGTTTAGAAGCACGAAGGATGATCTTTTGCAACAGATCGCCAAGGTTGACAGAGAGATTGCAAAAAGGGAGTCGCAGATAAATAAACTTAGGAAAAAGTTGAAAGAATTAGAAGAAGCAGCGAATAAACCTCTAGAAGCTAGTGGGCTTAAACGTCAAGTTGAAGAACAATCTCAGCAACCAAAGCATCAGTCTCTGGCACAAAAAATTTATGCTGAAAATAGGaGGAAAGCAGAAGAAGCTCATCGACTCCTAGAGAGGCTGGGTCCAAAAGTGGAATTACCTTTATACAATCAGCCGTCAGATACAAGTGTGTATCAGGAAAATCGTACAAAACATCAAACGTGTATGAGAGCAAGGCTTATAGCGAGGCTTCGACGTGAACATGCAGAACGTGCATCTCTTCATCGACAACAGTCACAAACGTACGCTATTTTGGTACAGGAGTGGCATCGTAAAGTAGAGCGGTTAGAAGCAACGCAGAAAAGGAAATCGAAAGAGGCGAGAAATCgcgaatttttcgaaaaagtATTTCCAGAATTACGAAAACAAAGGGAGGACAAAGAACGTTTTAATAGAGTTGGTGCTCGAATTAAAAGTGAAGCTGATCTAGAGGAAATTATGGACGGCCTTCAAGAGCAAGAgATGGAAGATAAGAAGATGCGGTCGTACGCAGTGATACCTCCTTTATTGCTGGATACAAAGCAAAGGCGAATCGCGTTTCAAAATCGGAATGGTCTTCTTCAGCCAGAAGAATTAGAGGCTCTTCACAGCgaacgaaaattaattaatgtatggAGTTCTGTGGAGCATGAATtgttcaaagaaaaatatttgcaacatcctaagaattttggaacgatAGCTCAATCTTTAGAACATAAGTCCGTTCCAGATTGTGTGCATCATTACTACCTCACTAAAAAAGCAGAAAATTATAAGCAGCTCTTGCGAAAATCGCGGCAACGAACACGTAGCTCTCGGAATAATCCTAATAATAAAgTAAATAATACTAGTTCAAGTATTGGACCTATAGACATATTAACTACGGGTGTTACGACGAGGTTGCAACGTGAGCAGCAACAAAAAACACAAGAGAATCCTCAAACTAATTCGACAGCAACAACAACCACGACGACCACGACGACGACTACAACTACGTCTAGTGTGTCTACATCCGCTGCAACAACGATAGTGACTACTGCAGCTACTTCTTTGAGTACAGCAACGTCgagtatatgtataagtaCAGAATCTGTAATAGCATCAACAACAGCTACAACGACATCTGTACCGAGTACCACGACATCATGCGTTACGACATCGTCGTCGACGACAACAAGTGCGAAGGACAATAGGGAAActaacaaagaaaataaagaaagtaaacTGGAAACTAAGGAACCACACCTTGTCAAAGTGGAAGTGAAAGAAGAATCACAGTGGGTGAATTCGGATACAGTGCCGGGAAAGGACGTTAAAGTAATAATCGACGGGAAAAGCACGTTGtcgtcgtcgtcatcgtcgtTGAACAACAACGCGACGAACGCCTCGACGATTCAGTCAGATTTCAAAGATTCTAACAAAAAGAAACCGGGTTGCAGGGAAGCAAACAGCGGCGGATCCGGCAGCGTTGGAAACGCGAGTCGAATCAAGGAGAAGAAAAAGGATAATCATGCCACCCCTATGGAAACCAGCGACGAGGAAGCTCAATCGATGGACACCATCGAAAGCGGCAGGCAGATTGGTCCTCACGCCTGTACAGTTTGCCAAAACATTGTTGAGGGAAACACACAGAGTAGAGCTTTGCCACGGAGTCAGGCGTCTCAGTACGGCTTACGAGAGGATCAAGTGACACCTGGTGCACGCGTGTGCAACACCTGTAGGTGCAAAGCCGTAAGAGGACGATACACGGCGTGTCCGCTGTTAGGATGTCCGAACTTGAACAATACCAGCTCGAAAACGAGAGTGAAAAGGCTGCGTGCACTGCCCGCGAAATGGCTTGATCTACCAGCTGAAGTTCGCGATCCTATTATACAGGAATTTCAAATACCAAACAACGCGACAAAATGTTGTTCAGCCTGCTTCAATCGAATATCCCGTCGATTGGCACCGCACCTAACCGGTGGTACCGAAGTGCCCGAAGACTCGGCCGATTCCTTGGCTCGACAGTGGACAGACGAGGAGCTAGAACAGCTCAGAACAGCCCTCCGAGAGCACGGTACAAACTGGGTAAAGGTGGCTGAACAAGTACCTGGAAAGACGAATCATCAATGCAAAAACTACTACTTCGCTTATCGGAAGAAATTGAGCCTAGATCAGGTGGTTGCAGAATATTATCAATCCTTGGGCGAAGAGAGAAGACCTTGTTTAACGGATGAAGAAGAAAGTGGCAGCAGTACAAGTAGCTGCGACGAACTTGCGGTACACGACTCAAGCGATACAGCCAGTGCAGGTAGTCCAGCTAACAATCTATCAAGTGGTACACCAGGGACACCAGGTGCTTCTGCATCCTCTAATTTGCCGATGTCCTTTTCACGATCAGCAGACCAAAAGCTTGGCGATAAGCTAGCAGATATCGCTGTAGTATCTTTAGTTCCACCGGTGAGCATAGGTTCATCACAACAGTCTTCCACCAGCGGAGGTAGCAACGCTGCTTCGGCTGGCACTAGAGAAGATTATGATAGTTCTGCCACGGAGACGGCGGACGAAGGTCAGGGCAGTACCGATTTAGAAAATAGTAGCGTCGTTGTGACTCTGACAACTGCCAGTAACAACGCTACACCACTGCAACAACACCAGCAGACTCATCAACAGGTTCCACCACCTTCTCACTCGCCACCTTCAACAACGAACAACTCTAATCCTCTAACCGTTAAAGATCTGATGCTTGGTGTCATTGAAATGCAATTGAAATGCAATCCTAATAGTCCAGCTGGTACTAGTGGATCATCAGTACCAGTCAATTCTGGAACACCAACGATATCTAGTATATTGAGGACGGATCATCGAAATGACATTACTTTTGTACGCGAATATAAACCGTCGTCCACTATGGCAAATACTAATATGCCGAGGGACTCGAATTTGGCAACTTTGTCGGTGGTATCGGGTCCTCATCATGGACATCGTTCTGCTCCTAGTCCTCAACAAATTGGTCAAATACAAGCAACAATTACTCCCTGTCCACCTGCGCCATCGAGCAGCCAATCTTCAACTTCGGATATCCTTCCGAAAGAGGGATTAGTTGTAATGCAAGTGCAACAAGCGCTTCGGGAAACCGAAGGAACGCTGGACTTGAGTATCAAAAAGCCACGGCAACAAGAATACAATCATTCCTTACAAACGCTTCATAAACCACCGACAGTGACTCTTTATCGGCCAGAACCTCCCCCTGGTGCTTACTACCATCCACATCCTCATCCTGAACAAGGACGTGGTGCAAAGAGTCCTCTGGTGTACGCATCTTCGCCACGACCTCAAGCACCTCTTACGCCTAAAATGAACAAAGTTGCCGTACCTCCACCTCATCCAAAATTATCTCCCAAGTTAAGTGCTATGGGAACAACGGGTCATAAGAGCGGCTCCATCACGCACGGTACACCTGTTTCTAGTGCGCGTTACGAGGGTCTACTCAGACAGATGACACCTCCAGGAAATCCTGGTAGTGTCGCTGGTACTCCAAGCGTTACGAGTGGTCCCAGTGCTGTTAATGCTCCTAGCAATCAAGGACCTAAGGAGACGGGATCTATTACTCAAGGAACTCCAGTTCATCCTTTCGCGGTGGACAAACGTGCGCCGATGTATGACTATCATAGAACTATTAGACATTCGCCTGTGACAACGGGCAGCATTCCTGGACAAGGACAAAGTCAAGCAGGAACAGCAGCAGTGGTCGTAACTCACAGCAACCAATACAACTCTTACTCGAGTCGACCACCGCCTAGTTACACGATGGAACAACAATTGTCCTCGAGACAGATCATTATGAACGATTATATAACCAGTCAACAGATGCATGCGCGTAGTCGAAGTGGTGGTGCGTCTGAAAGTAGCAATAAGAACGAGGTACCGTCGACGTTGTATTATACAAGCACTCCTCCGCCCCAAACGCATACACCATCTCGACAAGGAGTTATACAGAGGCATAATCCACAAAAACAGATGCATTATCCACCTCCGCCACCAGGATTGGAAGCATTTTCCAGTTTAGTAGATGTCGCTGTGCAACAACCAAGTCTTCCAGTTCCTCATCCACATAGTCATCCTGCCTCTGGAAGCAGTAGTCACGAAGGCCTTGGTAAGACAATGGCGGACAGACTATTGGCTGATCGTTACGGAGACAAGCATCGTCTAGCCATACATCAAGATCACAGAATGGCTGTGGCTCATCATCATCAGCGAGACAGGGAAAGAGAACGTGATCTGGTTCACTTGCGTGAGAAAGAAGAATATAGATTGCAACGAGAGAAAGAAATTCAGCAGCAAGAGCATCGATTAGTTCAGCAAAGAGAAAAGGACGTGCAACATGCTGATCATAGATTGTCGATACAGCAAAGAGAGAAAGATATGCAACATCCTGATCATCGTCTTACCGTCCATCaacaaagagaaaaagaaattcatcAGCAAATGGCAGTAGCAGCTGCCCAACGAGAAAAGGAACATCAAGAGCATCGTTTTTCTGTGCAGCAAAGAGAAAGAGATTTGGCGCACttgcaacagcaacaacagcaacaacaacataTTCAACAGCATATTCAACAACAACAAAGAATGGAAGCTGAAAGAAGACACATGGCTCAGTTGTACAGAGATCAACAACAACAATTGGATAGGGATAATAGGTTAATAAGTACCGGATTTACTCAATCCAGACTTCAACAACCACAACAGtcgcaacagcagcagcaacaacaacaatcgTCCTCTAGGCAAAGTCAGTCCTCCAATCAACAGCAGAACGAAACTGCGTCTACTTTAACCGCCGCCAGCTTGATAGATGCTATTATAACACATCAAATTAATCAAAGTGTTGAAAATACTGGTGGAAATTCTCAACCACAGCGACCTGGTGATCGTCTTTTCCAGGGATTCCACAGAGAAGCTCCAATAGAACCTAATGGTATGGCCCATAGTCCTGCTGGCGAAGGAAATGGAGGAAACAGCGGAGCAGGAAGTGCGAGTGGAAACGGGAACGGAAACAAACCAATTACTCTTGGAGAACACGTTGATCATATTGTTTCCAAAGATTATGGACCTCCACATTCCTCGTATAGATCATATAGCGGGTATCAAATGTCGGAAGATCAATGGAAGAGACGGAAAGCCAATGAAGCCGATTCCGTTAAAGCTGGAGACGAGCGTCAGATAATTCGTGTAACGCAGCAACAGtcgcagcagcagcaacagcagcaacaacaacaacagcagcagcagcagcagcaacaacaacAGCAACAGTTCCATTCGGTAGAGCCCGTCTCGCCTCCAGAAGCGGGTACTAATCATTACGGTCGTCGCCTCTACGAAACAACCACTGCCACATCAACTTCCGGAACTCCTTCCAACAAGCCGCATCTTTCACCGCTGGATTACGTTAAGAATAAGATCGTTGAAGTGATGCGTACATCCGAGGACGATAAAGGTGGAAATACGGGTGATAGAAATGGAGGAAACGTGACAAGTGGGGAAAAAGACGAGAAAATAGGGGGAAATGTAGAGAGTCCTTCGAGCGGAGAAATGATGGTAGATGAGACACCAAATCAAACTCCGCAACCACCCGCACCAGCACCCACAACCACCTTCTATCCGTTTAGTGCGTTAGGCGTGCATACTGGTCCACCGCCAGCACCACCACCTCCAACATCGGGATCTGCTTCTGTGGCTAAATCCGAACAAATGCAAGCTGAACCGGCACCGTTGCTTTCCGCGCAGTATGAACCACTTTCTGACGAGGATTGA
Protein Sequence
METVGKQVQVVSGLGVGGPVGPVGPVGGDLHHHHHPHPHSHPPHPHAHPHGHPHGTHGHSLVGVTSTPGRGQTQPPVSHNQHLPARSTPVQLHRPTQNYVNIKSSSPVSPRTVGAAVTYVQGGAAASSAAAAAGTVGSGTAGGPSIGGGGGGSGGGGGGVGVGVSNASGANSGTGVVGAGAGAAGAVGNVAAAGSGNSSGTSNSAAGAGSNSGGNSGTVGGAPGGYVAVPMAGGLRYIHPYPPTPTSASVPAVATVVTSASSAPTPVPVPPPATAPANPPTVSQTPPPSLSGTAYTARDAYRSATTNVNERIAISVSSSPLSQIGVGVGVVTAEYAANSGISSAMAGGRGDRPRISLLPPASVTPTPSPTAPDYQHVSSARNSRIGLMPVQPDQYCSRTAVEMANLQEAPPFKKIRLVQPTQVQSQSQSQSRCQSLSPADPCGKQEHVVQLQQPLRIDTRPTTGVYTPQTEAISPTLPEPNTQEDAQFRSTKDDLLQQIAKVDREIAKRESQINKLRKKLKELEEAANKPLEASGLKRQVEEQSQQPKHQSLAQKIYAENRRKAEEAHRLLERLGPKVELPLYNQPSDTSVYQENRTKHQTCMRARLIARLRREHAERASLHRQQSQTYAILVQEWHRKVERLEATQKRKSKEARNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHELFKEKYLQHPKNFGTIAQSLEHKSVPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNTSSSIGPIDILTTGVTTRLQREQQQKTQENPQTNSTATTTTTTTTTTTTTSSVSTSAATTIVTTAATSLSTATSSICISTESVIASTTATTTSVPSTTTSCVTTSSSTTTSAKDNRETNKENKESKLETKEPHLVKVEVKEESQWVNSDTVPGKDVKVIIDGKSTLSSSSSSLNNNATNASTIQSDFKDSNKKKPGCREANSGGSGSVGNASRIKEKKKDNHATPMETSDEEAQSMDTIESGRQIGPHACTVCQNIVEGNTQSRALPRSQASQYGLREDQVTPGARVCNTCRCKAVRGRYTACPLLGCPNLNNTSSKTRVKRLRALPAKWLDLPAEVRDPIIQEFQIPNNATKCCSACFNRISRRLAPHLTGGTEVPEDSADSLARQWTDEELEQLRTALREHGTNWVKVAEQVPGKTNHQCKNYYFAYRKKLSLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPANNLSSGTPGTPGASASSNLPMSFSRSADQKLGDKLADIAVVSLVPPVSIGSSQQSSTSGGSNAASAGTREDYDSSATETADEGQGSTDLENSSVVVTLTTASNNATPLQQHQQTHQQVPPPSHSPPSTTNNSNPLTVKDLMLGVIEMQLKCNPNSPAGTSGSSVPVNSGTPTISSILRTDHRNDITFVREYKPSSTMANTNMPRDSNLATLSVVSGPHHGHRSAPSPQQIGQIQATITPCPPAPSSSQSSTSDILPKEGLVVMQVQQALRETEGTLDLSIKKPRQQEYNHSLQTLHKPPTVTLYRPEPPPGAYYHPHPHPEQGRGAKSPLVYASSPRPQAPLTPKMNKVAVPPPHPKLSPKLSAMGTTGHKSGSITHGTPVSSARYEGLLRQMTPPGNPGSVAGTPSVTSGPSAVNAPSNQGPKETGSITQGTPVHPFAVDKRAPMYDYHRTIRHSPVTTGSIPGQGQSQAGTAAVVVTHSNQYNSYSSRPPPSYTMEQQLSSRQIIMNDYITSQQMHARSRSGGASESSNKNEVPSTLYYTSTPPPQTHTPSRQGVIQRHNPQKQMHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHSHPASGSSSHEGLGKTMADRLLADRYGDKHRLAIHQDHRMAVAHHHQRDRERERDLVHLREKEEYRLQREKEIQQQEHRLVQQREKDVQHADHRLSIQQREKDMQHPDHRLTVHQQREKEIHQQMAVAAAQREKEHQEHRFSVQQRERDLAHLQQQQQQQQHIQQHIQQQQRMEAERRHMAQLYRDQQQQLDRDNRLISTGFTQSRLQQPQQSQQQQQQQQSSSRQSQSSNQQQNETASTLTAASLIDAIITHQINQSVENTGGNSQPQRPGDRLFQGFHREAPIEPNGMAHSPAGEGNGGNSGAGSASGNGNGNKPITLGEHVDHIVSKDYGPPHSSYRSYSGYQMSEDQWKRRKANEADSVKAGDERQIIRVTQQQSQQQQQQQQQQQQQQQQQQQQQQFHSVEPVSPPEAGTNHYGRRLYETTTATSTSGTPSNKPHLSPLDYVKNKIVEVMRTSEDDKGGNTGDRNGGNVTSGEKDEKIGGNVESPSSGEMMVDETPNQTPQPPAPAPTTTFYPFSALGVHTGPPPAPPPPTSGSASVAKSEQMQAEPAPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00625424;
90% Identity
iTF_01122360;
80% Identity
-