Basic Information

Insect: Dufourea novaeangliae
Gene Symbol: ttk
Assembly: GCA_001272555.1
Location: NW:2388884-2391631[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 3.9 4.7e+03 -3.5 0.5 30 45 180 196 180 196 0.76

2 6 2.1e-07 0.00025 19.8 0.0 3 38 201 236 199 242 0.83

3 6 3.2e-11 3.8e-08 32.0 0.0 5 39 253 286 250 293 0.85

4 6 0.075 90 2.0 0.0 21 34 320 333 306 338 0.80

5 6 1.3 1.6e+03 -2.0 0.0 32 45 348 362 348 362 0.89

6 6 5.6e-12 6.7e-09 34.4 0.1 4 39 364 399 361 404 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	3.9	4.7e+03	-3.5	0.5	30	45	180	196	180	196	0.76
2	6	2.1e-07	0.00025	19.8	0.0	3	38	201	236	199	242	0.83
3	6	3.2e-11	3.8e-08	32.0	0.0	5	39	253	286	250	293	0.85
4	6	0.075	90	2.0	0.0	21	34	320	333	306	338	0.80
5	6	1.3	1.6e+03	-2.0	0.0	32	45	348	362	348	362	0.89
6	6	5.6e-12	6.7e-09	34.4	0.1	4	39	364	399	361	404	0.92

Sequence Information

Coding Sequence: ATGTCTGAAGTTGTTGGCCAGCATGAAATTGATCAGAGCTATTGTTTCAAATGGAATGACTATCACAGTCATTTAACCGATGTAATCAGACAACTTCTGGAAGAGGATTGCATGGTGGATGTTATACTAGCAGCTGCCGGAGAACGCATTCATGCCCATCGTATAGTCCTCTGCGCTTGTAGCACTTTGTTTCGAGAGGTTTTGAGTCAAATAAATGAGGATCATCctacaataatattaagtgaTATATCAGCACAGGATATAAAATCtattgttgaatttatttatcatgGAGAAGTGAGAGTACCAGTGGAAAATATTAGTAGTTTATTGGATGCTGCACgttcattgaaaatatgtGGTCTTATCGAgATTGATGAATTAGATGAAAATGACTCAGTTATAAGCACAAAAGACTTCAATGATAATAGTGAAGAACCAATGACTGTTATTAGCGAGgcagaagaaaatgttattaacgCATTGCAACATAGCTATGAAGATTTAGATGATCAACAAGAACAGCAAGCCACagataattcttctttaaataaaaaaaagaaacgtaggCGTGATACAACAAAGAGAGATTATAATGATGACATGTTAGCATCGGCCATCAACGACTTAAAGTCAGGGCAAACATTAATAGAAGCGTCATCTAAACATAATATACCACGTTCAACATTGTATATGCGTGCCAAAGCCTTAGGTATACATTTAAATGCATCAAGAAATGAATATCCTGCAGAGTGTATGAAGGCTGCTATAAATGCTGTAATTGGTGGATCCAGCTTGCAGCATGCATCAGAAATGTTTAGTATACCTAAGACTGTATTATGGAGACGAATTCAGAAGGAAGGATATCAAATATTGCGTTCAGAAATGAAAAGGTCCTATGGTTCTGATAAACGTGAAGCTGCAGTAAAAGCTTTAGAAAGGGGAGAGAATTTAACTAAAGTTGCACTTGAATTTAAAattCCAAAGACTACTTTATTCAGAGATAAAGCTCGGTTAGTAGATGAGGGAAAACTGCCATTATCGTTTTGGAAAAAACGTAAAAcggaaaatgaagaattaaaaagaTCTCGTCTGGAAGAAGCTGTCGCAGCCTGTAAGGGAGGCAAAATGTCGCAAGCGGCTGCATCAATGACTTACCATATTCCTAAAACGACAATATGGAGACGACTTCAACAAGATGGTAAAAAGTCAGAACGTTTGTTGAACTCGAGAAAGCAACGAACAACGGATTCGAAACACAACACAGAAATGAAAATCCAAAATGGATCCGATTTCACATATTGTGAGGTATCGTCAGAAATTCCTATAACTTACATAGATGAAAATAGTATACCCGAGGATTCTGTGATAATATTAACAGCAGACGATATGGATGGACTTAATTTAGAGGAAGGACgacaaattattgttaattcaGAATCAGTACAAGAATATGTACCTTGTACTATAAGCATAgaagaaaattcgaattattcacAAACAGAAAGTTAA
Protein Sequence: MSEVVGQHEIDQSYCFKWNDYHSHLTDVIRQLLEEDCMVDVILAAAGERIHAHRIVLCACSTLFREVLSQINEDHPTIILSDISAQDIKSIVEFIYHGEVRVPVENISSLLDAARSLKICGLIEIDELDENDSVISTKDFNDNSEEPMTVISEAEENVINALQHSYEDLDDQQEQQATDNSSLNKKKKRRRDTTKRDYNDDMLASAINDLKSGQTLIEASSKHNIPRSTLYMRAKALGIHLNASRNEYPAECMKAAINAVIGGSSLQHASEMFSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKRSRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKSERLLNSRKQRTTDSKHNTEMKIQNGSDFTYCEVSSEIPITYIDENSIPEDSVIILTADDMDGLNLEEGRQIIVNSESVQEYVPCTISIEENSNYSQTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00118108;
90% Identity: iTF_00963105;
80% Identity: iTF_00625602;