Dlab012160.1
Basic Information
- Insect
- Dryobota labecula
- Gene Symbol
- -
- Assembly
- GCA_947523025.1
- Location
- OX383294.1:16668123-16668904[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-09 1.4e-06 28.5 0.0 1 43 18 60 18 62 0.89 2 2 1.8 8.6e+02 0.4 0.1 14 23 142 150 132 152 0.69
Sequence Information
- Coding Sequence
- ATGCCTCGCAAATATATAAGAAAGGTTGGAGTTCGTCCACGAGCTGAATGGACGCAAGAGGCATTAATAGCTGCAATGGATGAAATTTCGAGAGGCATTCTTGGTATCAACGAAATATCTCGTAGATATGGGATTCCATCGAGAACATTAAGGAGAAGATTCGCAAACAAAAATACTGAAAAACAGACATTAGGAAAACACCCACTTCTTGATTTTGCAAACGAAAAACGTTTGGTGAGCCACATACAGAAATTAGAAAAAGCTGGTTTCCCTCCAACCCGAGACATGATACGAAGATTGGCATTCGAGTTCGCTGAGAAACTGGGTAAAGAAACCAATTTTGATAAGGAAACTCGAAAGGCTGGGCCGCATTGGTTAAGATCATTTTTAGAACGTAATACAGAGCTAAGTATTCGTCAGGCAGAAGGCTTATCAGTTGCAAGAGCACAGGGATTAAATCGAGATGAAGTTAACAAAATGTTTGAACTACTGCTTAAAGTGATGACAGAGCATGATTTGCTGGATAAACCGGATAGGATTTACAATATAGATGAGACAGGTGTCCAGTTAAATAACTCTACGGGAAAAGTTATTGCTACAAGAGGCGCAAGAGTAGTCCATTCTATTACTTCTGGTGAAAAAGGTGAAACTCTATCGGTAATAGCTTGCTGTAATGCTGTAGGGAACTTGGCTACATGA
- Protein Sequence
- MPRKYIRKVGVRPRAEWTQEALIAAMDEISRGILGINEISRRYGIPSRTLRRRFANKNTEKQTLGKHPLLDFANEKRLVSHIQKLEKAGFPPTRDMIRRLAFEFAEKLGKETNFDKETRKAGPHWLRSFLERNTELSIRQAEGLSVARAQGLNRDEVNKMFELLLKVMTEHDLLDKPDRIYNIDETGVQLNNSTGKVIATRGARVVHSITSGEKGETLSVIACCNAVGNLAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00745567;
- 90% Identity
- iTF_01532957;
- 80% Identity
- iTF_00622753;