Basic Information

Insect: Drymonia ruficornis
Gene Symbol: -
Assembly: GCA_947859195.1
Location: OX401918.1:10489366-10498825[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.6 4.5e+02 1.7 0.0 1 23 90 113 90 113 0.91

2 18 0.94 56 4.5 0.0 3 23 118 138 116 138 0.95

3 18 0.24 14 6.4 0.0 2 23 142 164 141 164 0.94

4 18 0.34 21 5.9 1.6 3 23 402 423 400 423 0.95

5 18 0.03 1.8 9.2 0.0 1 20 431 450 431 452 0.95

6 18 0.0044 0.26 11.9 0.5 2 23 462 483 461 483 0.94

7 18 3.7 2.2e+02 2.7 0.6 1 23 499 522 499 522 0.84

8 18 0.00081 0.049 14.2 2.8 1 23 531 554 531 554 0.96

9 18 5.6 3.4e+02 2.1 0.1 5 23 635 654 632 654 0.86

10 18 8.8e-06 0.00053 20.4 1.1 1 23 688 710 688 710 0.97

11 18 1.2e-05 0.00073 19.9 1.6 1 23 717 739 717 739 0.98

12 18 8.3e-05 0.005 17.3 2.3 1 23 744 766 744 766 0.96

13 18 0.00014 0.0083 16.6 0.8 1 23 772 794 772 794 0.98

14 18 2.3e-06 0.00014 22.2 1.5 1 23 800 822 800 822 0.97

15 18 0.00057 0.034 14.7 2.5 2 23 829 850 829 850 0.97

16 18 0.00028 0.017 15.6 0.5 2 23 858 880 857 880 0.97

17 18 0.00064 0.038 14.5 0.1 1 23 885 907 885 907 0.95

18 18 0.00021 0.013 16.0 2.8 1 23 913 936 913 936 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.6	4.5e+02	1.7	0.0	1	23	90	113	90	113	0.91
2	18	0.94	56	4.5	0.0	3	23	118	138	116	138	0.95
3	18	0.24	14	6.4	0.0	2	23	142	164	141	164	0.94
4	18	0.34	21	5.9	1.6	3	23	402	423	400	423	0.95
5	18	0.03	1.8	9.2	0.0	1	20	431	450	431	452	0.95
6	18	0.0044	0.26	11.9	0.5	2	23	462	483	461	483	0.94
7	18	3.7	2.2e+02	2.7	0.6	1	23	499	522	499	522	0.84
8	18	0.00081	0.049	14.2	2.8	1	23	531	554	531	554	0.96
9	18	5.6	3.4e+02	2.1	0.1	5	23	635	654	632	654	0.86
10	18	8.8e-06	0.00053	20.4	1.1	1	23	688	710	688	710	0.97
11	18	1.2e-05	0.00073	19.9	1.6	1	23	717	739	717	739	0.98
12	18	8.3e-05	0.005	17.3	2.3	1	23	744	766	744	766	0.96
13	18	0.00014	0.0083	16.6	0.8	1	23	772	794	772	794	0.98
14	18	2.3e-06	0.00014	22.2	1.5	1	23	800	822	800	822	0.97
15	18	0.00057	0.034	14.7	2.5	2	23	829	850	829	850	0.97
16	18	0.00028	0.017	15.6	0.5	2	23	858	880	857	880	0.97
17	18	0.00064	0.038	14.5	0.1	1	23	885	907	885	907	0.95
18	18	0.00021	0.013	16.0	2.8	1	23	913	936	913	936	0.98

Sequence Information

Coding Sequence: ATGACTTCAGATGATTCGGATGACGAACCGCTATCCATATTGGTGGAACATAAAAAGTTGAATCCGGAGGAATATGTAGACTCCAGGTTCATAGAAATTGAGGATGCCGAGGTAGCAAAGAAAAGGAAAAAGAAGTTTACCGTTGAAAAAGGTGTATCTGTGACGATAAATGTGAAGAAGCGTAAAGTTAGTGGTCGGTCGCCGCCTATAATCGAGCGGCCAGAGGATGTGTGGTTGTACATGAAAGACTTCAACACTACTGGGCCATATAGCTGCTTGTTGTGTCCAGAATGGTTCATAAACAGAGCTAAAATCATAGTACACTATATCTTGAACCATAAAAAAGATTTTTGTGGTATATGCAGGTACTTCGTGCCTGACAGAGATGCTTGGTGGGCACACCTTCAGTTCCACACGCCATGGCCCTGCTCCCAATGCGTTGAGAACTTCGAATCGGAAGCTGTGTTACGTCAGCACCTCAGCATTTCTCACACGCTCGTCCACTGTCGCCTCTGCCATTTCCGCGTCTCCGACGATGACCAGTACAACACCCATCTGTTCCAAAAGCACAACGTCACAAACGTATCAAGCAAAGACGAGGAGAATCTATGGGAACTGGAATACGAAGGGAGCCCGAACTTCCTCTGCTTACTATGCTCCAAATCAAATAACATGTCAAAGAACTTCTTCAACCATTACATGGGCTTCCACCATTTCACCTTGAAATGCTTTGCCAGTGTTATTTGTGGCAGGGACCCACCATTCCTCGTGTCCGGTGCTGATCTCAGAACTGAGTTCATTGAGGGTCAGTTGAAGGACCATGTGAGAGTTGGTTACGTAGACGTTGATGCTAGTAATATTTCTGATAATCAGAAAACAGGTCTCGATGACACTGGTGACTCGAAAGAGTTACTTAAAGTTCTGATTCCGGAGATCAAACAGGAGGATGCAAGTGGTGATGAGATGCAAGACCAGGGTACTGAAGAAAATAAAAGGGATGAGGCAAAGGATAGAAATGAACTCACTAGGACTTACAATGGTGTCGAAGACTTTGACGTCACCCTGATGGAGTTGATAGTGTTGCAGCAATGTTACTTTGATTACGTCAATCAGACGTTGACTGATATAAATGCAAATGTGGTACCGCAAATCTCTGATATTGATTATGAGAAAACGAAAACACAACACCACATGAATATATTCTGTCCGTTGTGTACAACGCATCTTAGTTCAATACAAAGTTTTACTAGTCACATGACCAAAATACACTCGGTCAAGTCCCTGCCAACGTTCTCGTGTAGAGTGTGCGCAACACCGTTCGATACTCAGAGTGAGTTGGATACTCATATTGTCCAGGAGTTGGGTGATTTCGATGACTTGTGGATCTGTCAGTTTTGTGACAAGGAGTTTGACAATAGAGGGGAGACGAGACGTCATCTGACGGAGCATGTCAGCAGCATTGATTATGACAACTGCTTCAGTCCACATTTAGGCTTCAAGTGTAGATACTGCCCAACATTGTTCTGGAATGAAACCGACAGAGAGACTCATCAAGTTCGTGCTCATTTCTCTAAGCACAAAGAGGATTATTATAATTGTGATAAATGCAATGAAATGTTTAGTGACAAGGTTTGGTTCATCCACCACTATTTAAAGAAACATAACACAGACGCCAAAGTGCCCATATATCTTCTGAAGTGCTGCATCTGCTGCCTGGTCCTACCAAATGTCAAGGACATGAGGGAGCACTTCAACAAGGCCCACCCTGAGGCTAAGAAGGTCTTCTGCTCATTGGACTCGTGTAAATATAAGCCGTTGAGCCATCGGAAATCATTCAAATTGCACCTAAAGACGGTCCACACACCCCGTCCCCGCGTGAAGCGCAATAAGATGGAATGCATCGTGTGCGGGCGCGAGTTCGGCAGCCCGCGCGCGTGCTCCGCGCACATGGCGCAGGTGCACGGCGCCGCCAAGTTCAAGTGCAAGCTGTGCGCCGAGCTGCTGCACACCAATGACGAGAGAAAACTCCACTATCTCATCTGCCACCCCGGCCAGCATCCCTTCGAGTGTCCGGAGTGCGGCAAGTCGTTCCAGTACAAGTCGTCCCTGTACATGCACAAGCAAGAACATCTGCCCAATAAGCAGACGTACAAGTGTACGTACTGCGGGAAGTCTTTCATGAAGCGCGACTCGTACCGCGAGCACGTGCTGATCCACGAGGGCCCCCGGCACGCGTGCTCGTACTGCCCGATGCGGTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGGCGCCACACCGGCGAGCGGCCCTACGCCTGCCCGCACTGCCCCAGGAGCTTCGCGGACAAGGGCGCGTGCACCGCGCATGCCAGGACACATTCGAGGGAGTCGTCGTTCGCGTGCCTCTACTGCGGACAGACGTTCGTGCAGAAGTCCAAACTCACTTACCACATTAGAAAACACACTGGAGAGAATCTGGAGACATGTTCGGTGTGTTCCAAGTTGTTCACGAGCGCGTGCTCGCTGCGGGAACACATGAAGATACACAACACTAATAAGGAGACAGTCAAGTGTCCCTTATGTGACAAGAAATACCAGGACGAGCGCTATATGCTGCGGCACTTGCGCACGGCGCACACGCGCGGGCAGTTCCTGTGTCCCGTGTGCGGCAAGCAGCTCACCAGCGCCACCGGCCTGCGCAACCACGTCGTCACGCACGGCGCCGTCAAGGTGTTCAAGTGCAAACAATGTCCGAAGACATACTCAGTCAAGCGAACCATCATAAAACATTTACGCCGACGACACGGCTTGAAAGGTACAGAGATCAATATAAAAGACTTTTACAAGAGACTGGAACCCAGGGAATGTCAGTTGGGCCTCGACGACGAAATGATGGACCATATCTTTGGACCACAAAAGAAAAAAACAAAGGTCAATGACTTGCTTCTCGGGGATTTCGTCACACTGACGAAGAATACAGAAAATAAAGGAGAAAATGAGGAAGAAAATGAGGACTCGGAGTCAGAAGATGAGATATCTAAAGATAGTGAGAAAGATAGTGATGAAGAGGGAAAGAGACCGATAAAAACTGAGAGGAACGATGACAGCGATCAAGGGGAATTGGAGCCTACTGACTTTGTGAGCGTGAAAATTGAGCCAATGGATGACGATGAGACTGCTTAG
Protein Sequence: MTSDDSDDEPLSILVEHKKLNPEEYVDSRFIEIEDAEVAKKRKKKFTVEKGVSVTINVKKRKVSGRSPPIIERPEDVWLYMKDFNTTGPYSCLLCPEWFINRAKIIVHYILNHKKDFCGICRYFVPDRDAWWAHLQFHTPWPCSQCVENFESEAVLRQHLSISHTLVHCRLCHFRVSDDDQYNTHLFQKHNVTNVSSKDEENLWELEYEGSPNFLCLLCSKSNNMSKNFFNHYMGFHHFTLKCFASVICGRDPPFLVSGADLRTEFIEGQLKDHVRVGYVDVDASNISDNQKTGLDDTGDSKELLKVLIPEIKQEDASGDEMQDQGTEENKRDEAKDRNELTRTYNGVEDFDVTLMELIVLQQCYFDYVNQTLTDINANVVPQISDIDYEKTKTQHHMNIFCPLCTTHLSSIQSFTSHMTKIHSVKSLPTFSCRVCATPFDTQSELDTHIVQELGDFDDLWICQFCDKEFDNRGETRRHLTEHVSSIDYDNCFSPHLGFKCRYCPTLFWNETDRETHQVRAHFSKHKEDYYNCDKCNEMFSDKVWFIHHYLKKHNTDAKVPIYLLKCCICCLVLPNVKDMREHFNKAHPEAKKVFCSLDSCKYKPLSHRKSFKLHLKTVHTPRPRVKRNKMECIVCGREFGSPRACSAHMAQVHGAAKFKCKLCAELLHTNDERKLHYLICHPGQHPFECPECGKSFQYKSSLYMHKQEHLPNKQTYKCTYCGKSFMKRDSYREHVLIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRSFADKGACTAHARTHSRESSFACLYCGQTFVQKSKLTYHIRKHTGENLETCSVCSKLFTSACSLREHMKIHNTNKETVKCPLCDKKYQDERYMLRHLRTAHTRGQFLCPVCGKQLTSATGLRNHVVTHGAVKVFKCKQCPKTYSVKRTIIKHLRRRHGLKGTEINIKDFYKRLEPRECQLGLDDEMMDHIFGPQKKKTKVNDLLLGDFVTLTKNTENKGENEEENEDSESEDEISKDSEKDSDEEGKRPIKTERNDDSDQGELEPTDFVSVKIEPMDDDETA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01180579; iTF_01179763; iTF_01073841;
90% Identity: -
80% Identity: -