Dpha004786.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- L
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000014.1:2800931-2805289[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.54 41 5.4 5.8 1 23 3 25 3 25 0.97 2 16 7.2e-06 0.00055 20.7 4.1 1 23 31 53 31 53 0.99 3 16 1.5e-05 0.0012 19.7 0.1 1 23 59 81 59 81 0.98 4 16 0.0018 0.14 13.2 0.1 2 23 97 119 96 119 0.94 5 16 5.1 3.9e+02 2.3 0.1 9 23 150 165 146 165 0.93 6 16 0.53 40 5.4 0.0 3 23 220 240 219 240 0.97 7 16 0.12 9.4 7.4 0.0 2 23 254 275 253 275 0.91 8 16 3.3e-05 0.0025 18.6 1.1 1 23 283 306 283 306 0.94 9 16 0.0055 0.42 11.6 0.1 1 23 311 334 311 334 0.93 10 16 0.015 1.2 10.3 0.2 1 23 394 418 394 419 0.90 11 16 0.00086 0.065 14.2 0.0 2 23 472 493 471 493 0.96 12 16 0.44 34 5.6 0.0 1 23 501 523 501 523 0.95 13 16 2.9 2.2e+02 3.1 1.0 2 23 531 552 530 553 0.93 14 16 0.75 57 4.9 0.3 1 23 627 649 627 649 0.94 15 16 0.0074 0.57 11.2 0.1 1 20 657 676 657 679 0.95 16 16 0.13 9.9 7.3 0.3 1 23 686 708 686 708 0.94
Sequence Information
- Coding Sequence
- ATGCCGTTTCGATGTGAATTCTGTTCCCGTCTGTTCAAGCACAAACGATCCCGTGATCGCCATGTCAAGCTTCATACTGGCGATAGAAAATACCGGTGTGCACATTGCGAATCTGCTTTCTCAAGAAGTGATCATTTGAAGATTCACATGAAGACTCATGACAATCAAAAACCGTTTCAATGCACCGTATGTAACCGTGGATACAACACAGCCGCTGCACTAACAGCCCATATGCAGGGCCACAAACGTGATCGGGAGGGTCGTGAGACTGATCGAAAGAGAGCTTTGCGATGTTTGCGTTGCGGTGATGCATTTCGACGCCCGGAAATGTtgcaaGCGCATATGGTCAGCGCTCATGGAGTAGATACGTCATCAATGACACCACCACGTCGTGTAGCATCGCAGCCACCGCCGACATTACTCGCTTGTATTTACTGCACTCGAGATACTTTTACCAGCATGGAACAACTACAACTACATGTACGTGCAGCTCATTCAGCACTTCTCAACGGGGAATCCCCTATACAACATAGTGAACAACCTACACCAACTGACTTGAGCAGACGAAGTCCAGGAGATGTATCTCCTGCTAAAAGAGCAAGATTGAGCTCAGGTTCCTCAACACCAAAAACGACACTATCTCCAAGTACACTTTTATGCAATCAATGCGACGCAGCGTTGCCAGATTTTGAAGCCTTTCGCGCTCACGTCAAAGGTCACCTTGAAGAAGGAGGAGAATTGGGACGGTCTAGCCCTTCACCTTGCCTCCATTGTGGGGCTACATTTGCAGATGCTGCAGCATCAGAACGCCATCTTGCTGCACATTATTTGGCTGTATCTAGCGAGTATACCTGTCATAGTTGTGTCCGAAGCTTCTCCTCTCCCGAAGATTTGCAAAAACATCTTCTCGATCTTCACGCTCATCATCTTTATCGCTGTACCTTGTGCAAAGAAGTATTTGATTCAAAAGTAGCTATTCAGGCACATTTTGCGGTAGCTCATAATGGAGAAAGTAAAGTATGGGTGTGTCGGTCATGTGGTGCTGCTGGAGGTTCTCTTCGGAGTGAGGCTGAAGGTGCAGCGCATGTCCGGGCCAGACACGCGGCAGCGCGATGTGCTTGCGGTGCCGTACTCGCGGGCGCACGAGCATTGCGAGCTCATACCGCTGCACACCACGCCTACCGGTGTCCGGTGCCAGCTTGTGTCGACACCTTCGCTGTTCAGTACTTATTAGAGCGCCATATGCAAATGCATCACACCGTTGCACATCAGGGTGTAAACGGTGATATGGCAAGATCAAAGCGAACAGAGAACAATAACGCTATTGAAAATGAAGATCCTTGTTCTCCATGTGTTCCGGATAACGGGCCGCCTGTGGACGAACGTCGGCGTAAGAACGGCGCAGTGGTACTGCAGTGCGCTTATTGCGGTGAGCGAGCTCGGAGCAGAGCTGAGCTCGAAGCTCACACCAGAGCCCACTCAGGAACAGGCACCGCCAGGCATAAGTGTCTCATTTGCGATGAAGTCCTACCATCGGCTGCAATCCTCGCTGAGCATAAATTAACTCATTGCAaggtcATAGCAGGAGATACATGTTCAAGATGTCGTTCTCGCCTTCCTTCTGAAGAAGCTTTTTTAAGTCACATGGCACGACACCATCCTGCATTGCCTGCTCCCTGCGTTGTATGCCGCCAAACTTTAGCCTCAGAGGCGGAAGCAAGGCTACACGCAAGATTTCATTTACGTCCGACTGAAGATGAGCAAAGATGTGCAATTTGTCTCAGAGCTTTAACTGAAAATGAAGCTGGCGAAGGAGCAAGGGCTTGTACATCTTGTTATGCTCGACATGCAACACCAAGGCCTCCGGTGACTAGTGAACATGATTGTCGACTCTGTCGCCGTGCCCTTGGCTCCCCGACTCGCTTACAAGCGCATCTAATCGAGCACACATTTGCTGGTATTGGAGCATTTACATGCTACTTATGCTCTGCCATGTTCACGAGTGCTGTTGGTTTGCAGAGACATTTGCCTGAACACGCAGCAGCACCTAGACCCTACGATTGTGCTAGATGTGGTCTTAAATTTTTCTTCCGAGCTGAGCTCGATAACCATGCATTTGTTCATCTTGAGGAAGCTGAAATAGCTCAGAGGGCATTTTATGAAGCGTACGCTAGAGGAGCTGCTACTGCTTGGGCTGCTCTGCAGCCTACAGACCTTGTTTCTCAACCATCGGTTTCGATACCTGCGCAAACGGAATTGCCAATAAAGCAAGAACCAGAAATAAAAGAAGAACGTAATGATGAATATATTGAGGTATCATCTCCTCCTGCGCCTGTTGAATCTGAGGAAGCGTCTCCTCCGCCAGTGGTGAAACAGGAGAAAAATAGCGAAGACTGA
- Protein Sequence
- MPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTAHMQGHKRDREGRETDRKRALRCLRCGDAFRRPEMLQAHMVSAHGVDTSSMTPPRRVASQPPPTLLACIYCTRDTFTSMEQLQLHVRAAHSALLNGESPIQHSEQPTPTDLSRRSPGDVSPAKRARLSSGSSTPKTTLSPSTLLCNQCDAALPDFEAFRAHVKGHLEEGGELGRSSPSPCLHCGATFADAAASERHLAAHYLAVSSEYTCHSCVRSFSSPEDLQKHLLDLHAHHLYRCTLCKEVFDSKVAIQAHFAVAHNGESKVWVCRSCGAAGGSLRSEAEGAAHVRARHAAARCACGAVLAGARALRAHTAAHHAYRCPVPACVDTFAVQYLLERHMQMHHTVAHQGVNGDMARSKRTENNNAIENEDPCSPCVPDNGPPVDERRRKNGAVVLQCAYCGERARSRAELEAHTRAHSGTGTARHKCLICDEVLPSAAILAEHKLTHCKVIAGDTCSRCRSRLPSEEAFLSHMARHHPALPAPCVVCRQTLASEAEARLHARFHLRPTEDEQRCAICLRALTENEAGEGARACTSCYARHATPRPPVTSEHDCRLCRRALGSPTRLQAHLIEHTFAGIGAFTCYLCSAMFTSAVGLQRHLPEHAAAPRPYDCARCGLKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAATAWAALQPTDLVSQPSVSIPAQTELPIKQEPEIKEERNDEYIEVSSPPAPVESEEASPPPVVKQEKNSED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00842895;
- 90% Identity
- iTF_00778181;
- 80% Identity
- -