Basic Information

Gene Symbol
Arid4b
Assembly
GCA_035043035.1
Location
JAWNNG010000970.1:53555-55942[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-29 5.8e-26 90.7 0.1 1 88 277 362 277 363 0.96

Sequence Information

Coding Sequence
ATGAattgtgtctgtctgtttgcgtTGCAGCAAGCCGACGATCCACCATCGCTGCCTGTGGGCACCGAGGTGAGCGCCAAATATAAGGGCGCCTTCTGCGAGGCCAAAGTCAGCAAAGTGGTGCGCAACATTAAGGTGAAGGTTGCCTACAAACAGGGACTAGGTTCTGGGATTGTGCCGGATGATGCAATTAAGGCTGCGCCCGGACAACTGCGCGCCGGTGCAACCGTTGAGGTGCGCCATCCGGATCGCAAGGACGCTCTGCTTGAAGGCGGCAGGCATTTCAATGAGAGCGAAACATTGGATCAATTGCCATTGACGCATCCGGAGCATTTTGGTAATCCGGTGGTGGGCGGTCGACGCGGACGCCGACGTGGTCAACTCAACGATGGCAGCtccgacgatgatgacgagaGCGATGCCAAGGAGGTGGTCAACGAGAAGGAGGAGCACATTGGTAAAGTCGTTTGCGTCGAGACCGAATCCAAGAAAAAGGACAAGGAGAAATGGTTTCCCGCTCTCGTTGTCGCACCCACCGCCCAGGTCAGCAAGCAGgcCACTGTGCGCATACGGGTCAAGGACGAGTATCTGGTTCGCTCTTTTAAGGATGGACGCTACTACACGGTGCCGAAGAAGGAGGCGAATGAGTTTACACGCGAGATAGCTAGCAAACAGGATGTGCCCGCTGTGCAGGCGGCCCTCGAGTTTCTCGACAAGAGCATTTTGCCCGCCCACTGGGATCGCGACTCACTGTTCGGTCTGGCCAATTTGACGACCGATGATGAGGCGGAAATCGAATCGGACTCATCGGACGATGAGCCGCACGAGGAGAAGGATCTGTTTGTGGCACAGCTGTACAAGTATATGGATGATCGTGGCACTCCGCTGAACAAGGTGCCATCAATCCAAAGCCGCGATGTTGATCTCTATCGTCTGTTCCGAGCGGTGCAGAAGCGTGGCGGCTACAATCGCGTCACCGCCAAGAATCAATGGAAAATGATTGCCATGCGACTGGGATTCACGCCGTGCACGTTCAGCGTTATGAATCTGGTGAAGCAGGCCTATAAGAAATTCCTGCAGCCATATGGTGACTTTCATCGCAAGCTCGGCTGCTCCATGCTGATGACATCGCGCAACTCCAGTCGCAGCAAGGGTCGCAGCCTGGTCCGTGCTAATTCGGTGGCTTCGCCCAAACCGGCGGAAACCACCAAAATGGAGATAATGAGCAAATTGGCCAATCAGGCGCTGGCAGCTCTCGTtgccgccggcagcagcaccacagcaacaacaacagcagcagcagcgtcatcatcatcatcatcatcatctacaacaacaacagcagcagcagctccatcatcaacagcagcaggagtcaACAGTGGGAGTAGTATCAGCACCACAGCTGCCGCGCCCACTCGCGCTGGCTCCCGGGCAATCTCACAATCAGCAGCTGAGGAATCGGGCAACACCAGCGAGTCCAGTGTGATTGTGGAGCCGGTGAAGAAACAGCGCAAAGTATCCGCCGcaggcagcagtggcagcaaagTCAAGAGTCTAGTGGAGAAATTCGAGGAGAAATCAACAGCAGGCACAACCActaacaccaccaccaactcCAACACCTCCACAACTGTCACACCAGCCACTGCAGGAGAgacagcagaagcaggagaATCAGCAGCTTCTGGCGGAGCAGTCGCTGTCACAACAGTGGCCACCGCCACCACATCCAGCGTTGGCAACACACCGGTTTCCatatcggcagcagcagcagatgcgacaacagcagcatcagcaacaacagtcggCGCCAAGGATGCAAAGGATGCCGAGGCCGATGTACCATTGGCTAAGATCAAAGCGGCGGCTGTTTCGACGCGCAATAACAGCATGGACAAGGAGCCAATCGCCGCTGGCAGCAATGCATCGAGCAAAGCGGCATCGGAAACGCAACGCAGTCGCGACGCAtccccagcagcaacaggaacagcagccgcatcagCAACGGGTAAGTCTGCTCGCGATTCCATCTCAATTGCCACAATTGAAGCAACTAGGTTGATGTTGGAAATTCGATCTTTTATAAGTCGTTTGTTAGCTCGATTCGCCCAGGTTCTTCGATCTTCGTCTTTATCGCCCAGGCAGACCTAG
Protein Sequence
MNCVCLFALQQADDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVPDDAIKAAPGQLRAGATVEVRHPDRKDALLEGGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTREIASKQDVPAVQAALEFLDKSILPAHWDRDSLFGLANLTTDDEAEIESDSSDDEPHEEKDLFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTAKNQWKMIAMRLGFTPCTFSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSSRSKGRSLVRANSVASPKPAETTKMEIMSKLANQALAALVAAGSSTTATTTAAAASSSSSSSSTTTTAAAAPSSTAAGVNSGSSISTTAAAPTRAGSRAISQSAAEESGNTSESSVIVEPVKKQRKVSAAGSSGSKVKSLVEKFEEKSTAGTTTNTTTNSNTSTTVTPATAGETAEAGESAASGGAVAVTTVATATTSSVGNTPVSISAAAADATTAASATTVGAKDAKDAEADVPLAKIKAAAVSTRNNSMDKEPIAAGSNASSKAASETQRSRDASPAATGTAAASATGKSARDSISIATIEATRLMLEIRSFISRLLARFAQVLRSSSLSPRQT