Basic Information

Gene Symbol
Arid4b
Assembly
GCA_035043855.1
Location
JAWNMQ010000233.1:332286-337879[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-29 6.3e-26 90.6 0.1 1 88 341 426 341 427 0.96

Sequence Information

Coding Sequence
ATGGTTAGAAGTGAGGATGGTGAGCAGGCTGAGGAGGCTGAGGAGGCTGTCTGGCCAGCGATTGAAGTCAATGTCACGTTTCATTATGATGACGCTGTGGCCTTAGATGATAAGCAGATGCCTGCACAGCAAGCCGACGATCCACCATCGCTGCCTGTGGGCACCGAGGTGAGCGCCAAATACAAGGGCGCCTTCTGCGAGGCCAAAGTCAGCAAAGTGGTGCGCAACATTAAGGTGAAGGTTGCCTACAAGCAGGGACTCGGTTCTGGGATTGTGCCGGATGATGCAATTAAGGCGGCGCCCGGACAACTGCGCGCCGGTGCAACCGTTGAGGTGCGCCATCCGGATCGCAAGGAGTGCATTGAGGCGACCATAACCAAAATTCAGGATTGCTCCCAATACACAGTCGTCTTCGATGATGGCGACATTACGACGCTGCGTCGAACAGCTCTCTGCTTGAAGAGCGGCAGGCATTTCAATGAGAGCGAAACATTGGATCAATTGCCACTAACGCATCCGGAGCATTTTGGTAATCCGGTGGTGGGCGGTCGACGCGGGCGACGGCGTGGTCAACTCAACGATGGAAGCtccgacgatgatgacgagaGCGATGCCAAGGAGGTGGTCAACGAGAAAGAGGAGCACATTGGCAAAGTCGTTTGCGTCGAGACCGAATCCAAGAAAAAGGACAAGGAGAAATGGTTCCCCGCTCTCGTTGTCGCACCCACCGCCCAAGTCAGCAAGCAGGCCACTGTGCGCATCCGGGTCAAGGACGAGTATCTGGTGCGCTCTTTTAAGGATGGACGCTACTACACCGTGCCGAAGAAGGAGGCGAATGAGTTTACACGCGAGATAGCCAGCAAACAGGATGTGCCCGCTGTGCAGGCGGCCCTCGAGTTTCTCGACAAGAGCATTTTGCCCGCCCACTGGGATCGCGATTCACTCTTCGGTCTGGCCAATTTGACGACCGATGATGAGGCAGAAATCGAATCGGACTCATCGGACGATGAGCCGCACGAGGAGAAGGATCTGTTTGTGGCACAGCTGTACAAGTATATGGATGATCGTGGCACTCCGCTGAACAAGGTGCCATCAATCCAAAGCCGCGATGTTGATCTCTATCGCCTATTCCGGGCGGTGCAGAAGCGTGGCGGCTACAATCGCGTCACCGCCAAGAATCAATGGAAAATGATTGCCATGCGACTGGGATTCACGCCGTGCACGTTCAGCGTTATGAATTTGGTGAAGCAGGCCTATAAGAAATTTCTGCAGCCATATGGTGATTTTCATCGCAAGCTCGGCTGCTCCATGCTGATGACATCGCGCAACTCCAGTCGCAGCAAGGGTCGCAGCCTGGTCCGTGCCAATTCGGTGGCTTCGCCCAAACCGGCGGAAACCACCAAAATGGAGATAATGAGCAAATTGGCGATGGCCAATCAGGCGCTGGCAGCTCATGTTgccgctggcagcagcagcacagcaacaacaacagcagcagcagcatcatcatcatcttcatcatcatctacaacaacaacagcagcagcagctgcatcatcaactgcagcaggagTCAACAGTGGGAGTAGTATCAGCGCCACAGCTGCCACCCCCACTCGCGCTGGCTCCAGGGCAATCTCACAATCAGCAGCTGAAGAATCAGGCAATACCAGCGAGTCCAGTGTGGTTGTGGAGCCGGTGAAGAAACAGCGCAAAGTATCCGCCgcaggcagcagcggcagcaaagTCAAGAACCTAGTGGAGAAATTCGAggaaaaatcaacagcaggcactaccaccaacaccaccaccaactccaccaccaccacagcTGTCACGCCAGCCACTGCAGCAGAgacagcagaagcaggaggatcagcagcagctggcggaGCAGTAGCTGTCCCAACAGTGGCCACCGCCACCACATCCAGCGTTGGCAGCACACCGGTTTCCAtttcggcagcagcagcagatgcgacaacaccagcatcagcaacaacagtcagCGCCAAGGATGCAAAGGATGCCGAGGCCGATGTACCATTGGCTAAGATCAAGGCGGCGGCTGTTTCGAcgcgcaacaacagcatggACAAGGAGCCAAGCGCCGCTGGCAGCAGTGCATCGAGCAAAGCTGCATCGGAAACGCAACGCAGTCGCGACGCAtccccagcagcaacaggaacagcagccgcatcagcAACGGGTAAGTCTGCTCGCGATTCCATCtcaattgcaacaattgaaGCAACTAGTTGA
Protein Sequence
MVRSEDGEQAEEAEEAVWPAIEVNVTFHYDDAVALDDKQMPAQQADDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVPDDAIKAAPGQLRAGATVEVRHPDRKECIEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTREIASKQDVPAVQAALEFLDKSILPAHWDRDSLFGLANLTTDDEAEIESDSSDDEPHEEKDLFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTAKNQWKMIAMRLGFTPCTFSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSSRSKGRSLVRANSVASPKPAETTKMEIMSKLAMANQALAAHVAAGSSSTATTTAAAASSSSSSSSTTTTAAAAASSTAAGVNSGSSISATAATPTRAGSRAISQSAAEESGNTSESSVVVEPVKKQRKVSAAGSSGSKVKNLVEKFEEKSTAGTTTNTTTNSTTTTAVTPATAAETAEAGGSAAAGGAVAVPTVATATTSSVGSTPVSISAAAADATTPASATTVSAKDAKDAEADVPLAKIKAAAVSTRNNSMDKEPSAAGSSASSKAASETQRSRDASPAATGTAAASATGKSARDSISIATIEATS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00619619;
90% Identity
iTF_00521128;
80% Identity
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