Doch004534.2
Basic Information
- Insect
- Drosophila ochracea
- Gene Symbol
- Arid4b
- Assembly
- GCA_035044125.1
- Location
- JAWNML010000021.1:23816956-23819384[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-29 5.4e-26 90.7 0.1 1 88 300 385 300 386 0.96
Sequence Information
- Coding Sequence
- ATGCAGCAAGCTGACGATCCACCATCGCTGCCTGTGGGCACCGAGGTGAGCGCCAAATACAAGGGCGCTTTCTGCGAAGCCAAAGTCAGCAAAGTGGTACGCAACATTAAGGTGAAGGTTGCCTACAAGCAGGGACTCGGCTCTGGGATTGTGTCCGATGATGCAATTAAGGCAGCGCCCGGACAATTGCGCGCTGGTGCAACCGTTGAGGTGCGCCATCCGGATCGAAAGGAGTCCATCGAGGCGACAATAACCAAAATTCAAGATTGCTCCCAATACACGGTCGTCTTCGATGATGGAGACATTACGACGCTGCGTCGCACAGCGCTCTGCTTGAAGAGCGGCAGGCATTTCAATGAGAGCGAAACATTGGATCAATTGCCACTGACGCATCCAGAGCATTTCGGTAATCCGGTGGTGGGCGGTCGACGCGGACGACGACGTGGTCAACTCAATGATGGCAGCtccgacgacgatgacgagaGCGATGCCAAGGAGGTGGTCAACGAAAAAGAGGAGCACATTGGCAAAGTCGTTTGTGTCGAGACCGAATCCAAGAAAAAGGACAAGGAGAAATGGTTTCCCGCTCTTGTTGTCGCACCCACCGCCCAGGTCAGCAAGCAGgCCACTGTGCGCATCCGGGTCAAGGACGAGTATCTGGTGCGGTCTTTTAAGGATGGACGCTACTACACGGTGCCGAAGAAGGAGGCAAATGAATTTACACGCGAGATAGCCAGCAAACAGGATGTGCCCGCTGTGCAGGCGGCCCTCGAATTTCTCGACAAGAGCATTTTGCCTGCCCACTGGGATCGCGACTCACTGTTCGGTCTGGCCAATTTAACAACCGATGATGAGGCGGAAATCGAATCGGACTCATCGGACGATGAGCCGCACGAGGAGAAGGATCTGTTTGTGGCACAGCTGTACAAATATATGGATGATCGTGGCACACCGCTGAACAAGGTGCCATCGATCCAAAGTCGCGATGTGGACCTCTATCGCCTGTTCCGGGCGGTGCAGAAGCGTGGCGGCTACAATCGCGTCACCGCCAAGAATCAATGGAAAATGATTGCCATGCGACTGGGATTCACGCCGTGCACGTTCAGCGTTATGAATCTGGTGAAGCAGGCCTATAAGAAATTCCTGCAACCGTATGGTGATTTTCATCGCAAGCTCGGCTGCTCCATGCTGATGACGTCCCGCAACTCCAGTCGCAGCAAGGGTCGCAGCCTGGTCCGTGCCAACTCGGTGGCCTCGCCCAAACCGGCGGAAACCACCAAAATGGAGATAATTAGCAAATTGGCGATGGCCAATCAGGCACTGGCAGCTCTCggcagcacagcaacaacaacagcagcagcatcatcatcagctacatcaacaacaacaacagctgcagctgcagcagctgcaacatcaacagcagcaggagtcaGCAGTGgaagtagcagcagcgccacagctgccacgcccactcgcGCTGGCTCCCGGGCAATCTCACAATCAGCAGCTGAGGAATCAGGCAACACTAGCGAGTCCAGTGTGGTTTTGGAGCCGGTGAAGAAACAGCGCAAAGTATCCGCCGCAGGCAGCGGTGGCAGCAAAGTCAAGAGTCTAGTGGAGAAATACGAGGAGAAATCAACAACAGGGACTACCAATACCACCACCAACACtaccacaaccacaactgtCACGCCAGCCactgcagcaggagcagcaacagcaggaggagcaggagcagcagcagcagcaggcggagCAGTAGCTGTTCCAACAGTGAGCACCGCCACCACATCCAGCGTCGGCAGCACAGCGGTTTCCatatcggcagcagcagcagctgctgcgacaacagcagcagcagcaacaacaacaacagcaacagtcagcGCCAAGGATGCAAAGGATGCCGAGGCCGATATGCCATTGGCAAAGATCAAGGCAGCGGCAGTTTCGAcgcgcaacaacagcatggACAAGGAGCCAAGCGCCGCTGGCAGCAATGCATCGAGCAAAGCTGCATCGGAAACGCAACGCAGTCGCGACGCATCAccaacaggaacaggaacagcagccgcatcagCACCGGGTAAGTCTGAAGCAACCAGTTGGATCTAG
- Protein Sequence
- MQQADDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKAAPGQLRAGATVEVRHPDRKESIEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNDGSSDDDDESDAKEVVNEKEEHIGKVVCVETESKKKDKEKWFPALVVAPTAQVSKQATVRIRVKDEYLVRSFKDGRYYTVPKKEANEFTREIASKQDVPAVQAALEFLDKSILPAHWDRDSLFGLANLTTDDEAEIESDSSDDEPHEEKDLFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTAKNQWKMIAMRLGFTPCTFSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSSRSKGRSLVRANSVASPKPAETTKMEIISKLAMANQALAALGSTATTTAAASSSATSTTTTAAAAAAATSTAAGVSSGSSSSATAATPTRAGSRAISQSAAEESGNTSESSVVLEPVKKQRKVSAAGSGGSKVKSLVEKYEEKSTTGTTNTTTNTTTTTTVTPATAAGAATAGGAGAAAAAGGAVAVPTVSTATTSSVGSTAVSISAAAAAAATTAAAATTTTATVSAKDAKDAEADMPLAKIKAAAVSTRNNSMDKEPSAAGSNASSKAASETQRSRDASPTGTGTAAASAPGKSEATSWI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00619619;
- 90% Identity
- iTF_00521128;
- 80% Identity
- -