Basic Information

Insect: Drosophila virilis
Gene Symbol: stc
Assembly: GCA_007989325.2
Location: CM017607.2:18805920-18810778[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 1.4e+04 -4.3 1.6 15 19 577 581 576 581 0.81

2 14 0.1 4.7e+02 0.6 2.0 4 11 610 617 609 618 0.90

3 14 1e-06 0.0049 16.5 15.1 1 19 622 639 622 639 0.93

4 14 4e-08 0.00019 21.1 13.6 1 18 675 692 675 693 0.98

5 14 3 1.4e+04 -6.4 4.1 7 13 697 703 697 704 0.77

6 14 3.6e-09 1.7e-05 24.4 12.9 1 19 733 751 733 751 0.98

7 14 2 9.4e+03 -3.5 0.5 5 10 781 786 781 786 0.90

8 14 4.3e-05 0.2 11.4 17.0 4 19 799 814 792 814 0.88

9 14 0.085 4e+02 0.8 11.3 1 11 854 864 854 876 0.79

10 14 5e-10 2.4e-06 27.1 15.1 1 18 881 898 881 899 0.97

11 14 3 1.4e+04 -4.6 1.2 6 10 928 932 928 932 0.88

12 14 3 1.4e+04 -7.5 10.4 10 18 946 955 935 956 0.78

13 14 3.7e-07 0.0017 18.0 15.0 1 16 992 1007 992 1017 0.93

14 14 1.4e-06 0.0064 16.2 12.4 1 19 1024 1043 1024 1043 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	1.4e+04	-4.3	1.6	15	19	577	581	576	581	0.81
2	14	0.1	4.7e+02	0.6	2.0	4	11	610	617	609	618	0.90
3	14	1e-06	0.0049	16.5	15.1	1	19	622	639	622	639	0.93
4	14	4e-08	0.00019	21.1	13.6	1	18	675	692	675	693	0.98
5	14	3	1.4e+04	-6.4	4.1	7	13	697	703	697	704	0.77
6	14	3.6e-09	1.7e-05	24.4	12.9	1	19	733	751	733	751	0.98
7	14	2	9.4e+03	-3.5	0.5	5	10	781	786	781	786	0.90
8	14	4.3e-05	0.2	11.4	17.0	4	19	799	814	792	814	0.88
9	14	0.085	4e+02	0.8	11.3	1	11	854	864	854	876	0.79
10	14	5e-10	2.4e-06	27.1	15.1	1	18	881	898	881	899	0.97
11	14	3	1.4e+04	-4.6	1.2	6	10	928	932	928	932	0.88
12	14	3	1.4e+04	-7.5	10.4	10	18	946	955	935	956	0.78
13	14	3.7e-07	0.0017	18.0	15.0	1	16	992	1007	992	1017	0.93
14	14	1.4e-06	0.0064	16.2	12.4	1	19	1024	1043	1024	1043	0.96

Sequence Information

Coding Sequence: atggctGAGCAACGGAGCCAACGCTATAAGGACTCTGACTATCAGGATTATCAGACTGCGGTCAGAGAACTTATCTTGTATCCGGATTACGGGCCATTCTATGGCATAATGGGCGTGGTCGCTGCCATTGTATTCTCATCGATTGGTTCCGCATATGGCACAGCTGTCTCTGGCACGGGAATTGCCGCCACGGCAGTTATGCGTCCGGAGCTGATCATGAAATCGATAATTCCCGTTGTTATGGCGGGAATCATAGCCATCTATGGACTGGTCGTATCGGTGCTAATTTCTGGTACACTGAATACCGCCGCAACTTATCCGGTGGCCAAGGGTTATGTGCATCTGGCGGCCGGTCTATCAGTGGGCATGTGCGGTTTGGCCTCTGGGTATGCGATTGGAGTTGTAGGCGATGTCGGTGTGCGCAATACGGCGCAGCAACCACGTCTATTCATTGGCATGattttgatattgatattctCTGAGGCGCAGCAACAAGGAACACACAAAAACTCGGATCCACTTTTCGCCAGCGTGGGCAAAGCGAAAAAAGAGGAGCGAAAAAAAGCACGCTGCCAAGCGTACGCCATGGCCGAGtattggcagcaacagcaacagcagcagcagcagcagctggtaaCGAACGGTGCTGACGCAGCGCCTGCTGCAGACGGCTCAGCCACAGCGAAtgggcacaacaacaacaataactatgtgaatttcaatcaatttatCACACAACACAACCTGGCCAGCTCCAGTCTGGGCTACAGCattggcggtggcggcggcgcctTTGGCCTGACGCCCAGCGTTAGCGCCAACAGCAATTTTgtcggtggcggcggcggcggcggcgacaatTTGTATGCGCCAACGTTTTATGCCTCTCAAAATGGCGATGGCGCCGCAAGTGGCAACAGTTATAATGCAGCCggagccgcagccgctgcttaTCCCAATCTTTATACACCCTTTGGAAATAATCCgtttgctgccgctggcgTTGGCTACGATTTCAGCACTTCCAAGCTGCAGGCCACAGCGCCCGAATTTGTGCCCAATTTTGCCAAACTCAGTCTGACGTCGCCGTCAGCGTCGGCGTCTAGCAAAaatcataacaacaacaacaacactgccACACagccaaatgcagcagcagcaggcagcaattCATCACAGCactcgcagccgcagccgcagctgctgtcACAAAGAGCCGACCAGAGGCAGCCGAAGCCGcatggcagcggcaacaatagTCGCCAACAGCGACGCAACGACTACCGCGAGGATCGCAATGAGGAGCGCTATGAGCGCGGCAAGAAACCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAATAAGCGACGCGACGATTGGAATCGCAATCGGGATCGCATCAATGGCTATCCACGCGCCACCGAGGAGCTGgacacaagcaacagcaatgacAGCGCACAGCCCTCGCCAGAGAAGCAGCCgtcgcaacagcagctgcaccagcagcaacaaatctCACCGAGACGTGCGCCCGATCATGAAAAGCTGTCGCAGCGTGAAAAGCTAATGCGCGACATTGAGCAGCGGCGTCTGGAGTGCCTGGTCTGTGTGGAGTTGATTAAGGCGCATCATGGCACCTGGTCGTGCCAGAATTGTTATCATGTGCTGCACCTCAAGTGCACCATCACCTGGGCCAGCAGCTCGAAATCCGCCGAGGGCTGGCGTTGCCCCGCCTGCCAGAATGTGCTGGAGGAGCTGCCGCGCGAATATCTGTGCTTCTGTGGCAAACTCAAGAATCCACCGTTGACGCGCACCGAACTAGCCCACAGCTGCGGTGAGCTGTGCTGCCGTGTCGAGGGCTGCAGCCATGCGTGCACGCTGCTCTGCCATCCCGGTCCGTGTCCGCCATGCCAGGCGAATGTCAGtcgcagctgcggctgcggacGCACCTCCAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGTGAGGCCATTTGCGACAAGCTGCTCAACTGCGGCGAGCATCGTTGCCAGCAGCCGTGCCATGCGGGCAAGTGTGAGGCGTGCGCGgagcaagtgcagcagcaTTGCCATTGCGGCAAGCAGCAGCGCGAGGTGCAGTGCACCCGCGAGAGCCAGGATAAGCGCAGCTATTCGTGCAAAGAGTGCTGCAGCAAGCCGCTGCCCTGCGGCAATCATAAATGCAAGGATTCATGCCACGCCGGCGCTTGTCGTCCCTGCAAGCTGAGTCCCACACAAATCACCAGCTGCCCATGCGGCAAACTGCCGGTGCCGGCAACGCAGCGCGCCAGTTGCCTGGATCCGGTGCCCACCTGCGAGGGCGTCTGCGGCAAAACGCTGCGGTGCGGCAAACCCGCGCATCCGCATCAATGCGCCAGCAAATGCCACCTGGGCCAGTGCCCGCCGTGCCCCAAGCAAACGGCGGTCAAGTGCCGTTGCGGCCACATGGATCAGATGATCAAATGCCGCCAATTGTCTACCCGTGCGGACGATGCGCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGATATCGATCACGCCTGCCCGTTGCCCTGCAATCGCACGCTCAGCTGTGGCCGGCATAAATGCGATCAGCCCTGTCATCGTGGCAATTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGTGAGTGCGGCGCCGAGGTCATCTATCCGCCGGTGCCATGCGGCACCAAGAAGCCCATCTGCAAGCGACCCTGTTCGCGGACGCACGGCTGCGAGCATCCACCACAGCATAATTGCCATGCGGCGGCTAGCTGCCCGCCCTGCATGATGTTCACCACCAAGTGGTGTCATGGCAATCACGAACAGCGCAAGACCATACCCTGCTCCCAGGCCAGCTTTAGTTGTGGCCTAGCCTGCGGCAAGCCGCTCGCCTGCGGTCGCCACAAATGCATACGGCCCTGTCATGAGGGCGAATGCCAGCAGCCGGGCGAGCTGTGCCGCCAGAGCTGCACCAAGCCGCGTCTATTGTGCGGCCACAAGTGCGCGGCCATATGCCATGAGGGCGTCTGTCCTGAAACGCCCTGCAAGGAGCTGGTCGAGGTGCAGTGCGAGTGCGGCAATCGTAAGCAAAGCCGCAGCTGCCAGGAGCTGGCACGGGAGCACAGTCGCATTGCCACCGCACAGCTGGCCTCCTCCATGGCGGAAATGTCGCGCGGCAACTACATGGAACTCAGCGAGATACTGGCGCccaacaagaacaataaatCCAACAAAACCTTGAACTGCAATGATGAGTGCCGTCTGTTGGAGCGTAATCGTCGCTTGGCTATTGGCTTGCAGTCGCGTAATCCGGAGACGCAGCTCAAGTCGCTGACAAAGTACTCGGAATTCTTGCGCGGCTTTGCCAAACGCAATCCGGCGCTGACAAAGAGCGTCTATGAAACCCTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAAAAGTCGAGAAGTCACTCGTTTCCCACCATGAATCGTGAGAAGCGTCAATTGGTGCATGAGCTATGCGAAGTTTTTGGCGTGGAGTCTGTTTCCTACGACAAGGAGCCAAATCGCAATGTGGTTGCCACAGCGCACAAGGAGCGGTGCTGGCTCCCAGCCACTAGCATCATGGAGGTGCTGGCACGCGAATCCGGGCAACGTCGCGTGCCCGTGCCCAGCAACAATGCATGGAGCCTCAAAAAGTAG
Protein Sequence: MAEQRSQRYKDSDYQDYQTAVRELILYPDYGPFYGIMGVVAAIVFSSIGSAYGTAVSGTGIAATAVMRPELIMKSIIPVVMAGIIAIYGLVVSVLISGTLNTAATYPVAKGYVHLAAGLSVGMCGLASGYAIGVVGDVGVRNTAQQPRLFIGMILILIFSEAQQQGTHKNSDPLFASVGKAKKEERKKARCQAYAMAEYWQQQQQQQQQQLVTNGADAAPAADGSATANGHNNNNNYVNFNQFITQHNLASSSLGYSIGGGGGAFGLTPSVSANSNFVGGGGGGGDNLYAPTFYASQNGDGAASGNSYNAAGAAAAAYPNLYTPFGNNPFAAAGVGYDFSTSKLQATAPEFVPNFAKLSLTSPSASASSKNHNNNNNTATQPNAAAAGSNSSQHSQPQPQLLSQRADQRQPKPHGSGNNSRQQRRNDYREDRNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRATEELDTSNSNDSAQPSPEKQPSQQQLHQQQQISPRRAPDHEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQHCHCGKQQREVQCTRESQDKRSYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPATQRASCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHPPQHNCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRPCHEGECQQPGELCRQSCTKPRLLCGHKCAAICHEGVCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLNCNDECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFLRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00475629;
80% Identity: -