Basic Information

Insect: Drosophila americana
Gene Symbol: stc
Assembly: GCA_018152915.1
Location: JAECXQ010000168.1:200531-204447[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4 1e+04 -3.6 0.5 15 18 351 354 350 355 0.79

2 16 2 1.4e+04 -4.1 1.6 15 19 378 382 377 382 0.81

3 16 0.056 4e+02 0.9 2.0 4 11 411 418 410 419 0.90

4 16 5.8e-07 0.0042 16.8 15.1 1 19 423 440 423 440 0.93

5 16 1.7 1.2e+04 -3.9 0.9 6 10 466 470 465 470 0.88

6 16 2.2e-08 0.00016 21.3 13.6 1 18 476 493 476 494 0.98

7 16 2 1.4e+04 -6.2 4.1 7 13 498 504 498 505 0.77

8 16 2e-09 1.4e-05 24.7 12.9 1 19 534 552 534 552 0.98

9 16 1.1 8e+03 -3.3 0.5 5 10 582 587 582 587 0.90

10 16 2.3e-05 0.17 11.6 17.0 4 19 600 615 593 615 0.88

11 16 0.057 4.1e+02 0.8 11.6 1 11 655 665 655 677 0.79

12 16 2.8e-10 2e-06 27.4 15.1 1 18 682 699 682 700 0.97

13 16 2 1.4e+04 -4.3 1.2 6 10 729 733 729 733 0.88

14 16 2 1.4e+04 -7.3 10.4 10 18 747 756 736 757 0.78

15 16 2e-07 0.0015 18.2 15.0 1 16 793 808 793 818 0.93

16 16 7.5e-07 0.0054 16.4 12.4 1 19 825 844 825 844 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4	1e+04	-3.6	0.5	15	18	351	354	350	355	0.79
2	16	2	1.4e+04	-4.1	1.6	15	19	378	382	377	382	0.81
3	16	0.056	4e+02	0.9	2.0	4	11	411	418	410	419	0.90
4	16	5.8e-07	0.0042	16.8	15.1	1	19	423	440	423	440	0.93
5	16	1.7	1.2e+04	-3.9	0.9	6	10	466	470	465	470	0.88
6	16	2.2e-08	0.00016	21.3	13.6	1	18	476	493	476	494	0.98
7	16	2	1.4e+04	-6.2	4.1	7	13	498	504	498	505	0.77
8	16	2e-09	1.4e-05	24.7	12.9	1	19	534	552	534	552	0.98
9	16	1.1	8e+03	-3.3	0.5	5	10	582	587	582	587	0.90
10	16	2.3e-05	0.17	11.6	17.0	4	19	600	615	593	615	0.88
11	16	0.057	4.1e+02	0.8	11.6	1	11	655	665	655	677	0.79
12	16	2.8e-10	2e-06	27.4	15.1	1	18	682	699	682	700	0.97
13	16	2	1.4e+04	-4.3	1.2	6	10	729	733	729	733	0.88
14	16	2	1.4e+04	-7.3	10.4	10	18	747	756	736	757	0.78
15	16	2e-07	0.0015	18.2	15.0	1	16	793	808	793	818	0.93
16	16	7.5e-07	0.0054	16.4	12.4	1	19	825	844	825	844	0.96

Sequence Information

Coding Sequence: ATGGCCGAGTATTGGCAGCAACAGCAGCAGCAGCAGCAGCTGGTAACGAACGGTGCTGACGCAGCGCCTGCTGCGGAGGCCTCAGCCACAGCGAATGGGCACAACAACAACAATAACTATGTGAATTTCAATCAATTTATCACACAACACAATCTGGCCAGCTCCAGTCTGGGCTACAGCATTGGCGGTGGCGGCGGCGCCTTTGGCCTGACGCCCAGTGGCAGCGCCAGCAGCAATTTTGGCGGCGGCGGCGGCGGCGACAATTTGTATGCGGCAACGTTTTATGCTTCTCAAAATGGCGATAGCGCCGCAAGTGGCAACAGTTATAATGCAGCCGCAGCAGGATCAGCTGCTTATCCCAATCTTTATACACCATTTGGAAATAATCCGTTTGCTGCCGCTGGCGTTGGCTACGATTTTAGCGCTTCCAAGCTGCAGGCCACAGCGCCCGAATTTGTGCCCAATTTTGCCAAGCTCAGTCTGACGTCGCCGTCAGCGTCGGCGTCGGCGTCTAGCAAAAATCATAACAACAACAACAACACTGCCACACAGCCAAATGCAACAGCAGCAGGCAGCAATTCATCACAGCACTCGCAGCCGCAGCTGCTGCCACAAAGAGCCGACCAGAGGCAGCCGAAGCCGCATGGCAGCGGCAACAATAGTCGCCAGCAGCGACGCAACGACTACCGCGAGGATCGCAACGAGGAGCGCTATGAGCGCGGCAAGAAACCGCAGAAGCAACAGCGCTACGACAATCATCGCAGCAATAAGCGACGCGACGATTGGAATCGCAATCGGGATCGCATCAATGGCTATCCACGCGCCACCGAGGAGCTGGACACAAGCAACAGCAATGACAGCGCGCAGCCCTCGCCAGAAAAGCAGCCGTCGCAACAGCAGCTGCACCAGCAGCAACAAATCTCACCAAGACGCGCGCCCGATCATGAAAAGTTGTCGCAGCGGGAAAAGCTAATGCGCGACATTGAGCAGCGGCGTCTGGAGTGCCTGGTCTGTGTCGAGCTGATTAAGGCGCATCATGGCACCTGGTCGTGTCAGAATTGTTATCATGTGCTGCATCTGAAGTGCACCATCACCTGGGCCAGCAGCTCGAAATCCGCCGAGGGCTGGCGTTGCCCCGCCTGCCAGAATGTGCTGGAGGAGCTGCCGCGCGAATATCTGTGCTTCTGTGGCAAACTCAAGAATCCACCGTTGACGCGCACCGAATTAGCCCACAGCTGTGGCGAGCTGTGCTGCCGTGTTGAGGGCTGCAGCCATGCGTGCACGCTGCTCTGCCATCCCGGTCCGTGTCCGCCATGCCAGGCGAATGTCAGTCGCAGCTGCGGCTGCGGACGCACCTCCAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGTGAGGCCATTTGCGACAAGCTGCTAAACTGCGGCGAGCATCGTTGCCAGCAGCCGTGCCATGCGGGCAAGTGTGAGGCGTGCGCGGAGCAAGTGCAGCAGCATTGCCATTGCGGCAAGCAGCAGCGCGAGGTGCAGTGCACCCGCGAAAGCCAGGATAAGCGCAGCTATTCGTGCAAGGAGTGCTGCAGCAAACCGCTGCCCTGCGGCAATCATAAATGCAAGGATTCCTGCCATGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCACACAAATCACCAGCTGCCCCTGCGGCAAGTTGCCGGTGCCCCCAACGCAGCGCACCAGTTGCCTGGATCCGGTGCCCACCTGCGAGGGCGTCTGCGGCAAAACGCTGCGCTGCGGCAAACCTGCGCATCCGCATCAATGCGCCAGCAAATGCCACCTGGGCCAGTGCCCGCCGTGCCCCAAGCAAACGGCGGTCAAGTGCCGTTGCGGCCACATGGATCAGATGATCAAGTGCCGCCAATTGTCTACCCGTGCGGACGACGCGCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAATGCCGAGTGCTGCATCGATATCGATCACGCCTGCCCGTTGCCCTGCAATCGCACGCTCAGCTGTGGCCGGCATAAATGCGATCAGCCCTGTCATCGTGGCAACTGTCCGCCCTGCTATCGCAGCAGTTTCGAGGAGCTGTACTGTGAGTGCGGCGCCGAGGTCATTTATCCGCCGGTGCCATGCGGCACCAAGAAGCCCATCTGCAAGCGACCCTGTTCGCGGACGCACGGCTGCGAGCATCCACCACAGCATAATTGCCATGCGGCGGCCAGCTGCCCGCCCTGCATGATGTTCACCACCAAGTGGTGTCATGGAAATCACGAACAGCGCAAGACCATACCCTGCTCCCAGGCTAGCTTTAGTTGTGGCCTAGCCTGCGGCAAGCCGCTCGCCTGCGGACGCCACAAATGCATACGGCCCTGTCATGAGGGCGAATGCCAGCAGCCTGGCGAGCTGTGCCGCCAGAGCTGCACCAAGCCGCGTCTATTGTGTGGCCACAAGTGCGCGGCCATATGCCATGAGGGCGTCTGTCCTGAGACGCCCTGCAAGGAGCTGGTCGAAGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAGCTGGCACGGGAGCACAGTCGCATTGCCACCGCACAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTACATGGAACTCAGCGAGATACTGGCGCCCAACAAGAACAATAAATCCAACAAAACCTTGAACTGCAATGATGAGTGTCGTCTGTTGGAGCGTAATCGTCGCTTGGCTATTGGCTTGCAGTCGCGTAATCCGGAGACGCAGCTCAAGTCGCTGACAAAGTACTCGGAGTTCTTGCGCGGCTTTGCCAAACGCAATCCTGTGCTGACCAAGAGCGTCTATGAAACCCTCACCGATCTGGTCAAGCTGGCCAAGGAGAGCAAACAAAAGTCGAGAAGTCATTCGTTTCCCACAATGAATCGTGAGAAGCGTCAATTGGTGCATGAGCTATGCGAAGTTTTTGGCGTGGAGTCTGTTTCCTATGACAAGGAGCCCAATCGTAATGTGGTTGCCACAGCGCACAAGGAGCGGTGCTGGCTACCTGCCACTAGCATCATGGAGGTGCTGGCACGCGAATCCGGGCAACGTCGCGTGCCCGTGCCCAGCAACAATGCATGGAGCCTTAAAAAGTAG
Protein Sequence: MAEYWQQQQQQQQLVTNGADAAPAAEASATANGHNNNNNYVNFNQFITQHNLASSSLGYSIGGGGGAFGLTPSGSASSNFGGGGGGDNLYAATFYASQNGDSAASGNSYNAAAAGSAAYPNLYTPFGNNPFAAAGVGYDFSASKLQATAPEFVPNFAKLSLTSPSASASASSKNHNNNNNTATQPNATAAGSNSSQHSQPQLLPQRADQRQPKPHGSGNNSRQQRRNDYREDRNEERYERGKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRATEELDTSNSNDSAQPSPEKQPSQQQLHQQQQISPRRAPDHEKLSQREKLMRDIEQRRLECLVCVELIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCEAICDKLLNCGEHRCQQPCHAGKCEACAEQVQQHCHCGKQQREVQCTRESQDKRSYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPPTQRTSCLDPVPTCEGVCGKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHPPQHNCHAAASCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIRPCHEGECQQPGELCRQSCTKPRLLCGHKCAAICHEGVCPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKNNKSNKTLNCNDECRLLERNRRLAIGLQSRNPETQLKSLTKYSEFLRGFAKRNPVLTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00617310;
80% Identity: -