Dvar014000.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila varians
Gene Symbol
ftz-f1
Assembly
GCA_018150405.1
Location
JAECWK010000135.1:14611257-14621892[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-19 2.6e-15 56.5 0.5 1 76 192 267 192 296 0.71
2 2 7.3e-72 5.5e-68 230.0 0.9 155 408 403 649 376 651 0.91

Sequence Information

Coding Sequence
ATGTTATTAGAAATGGATCAGCAACAGGCGACCTATATATTTCCGACAGGCTACCAGGACACCACCTCATCCCACTCGCAACAGAGCGGTGGCGGTGGCGGTGGAGGAGGAAATCTCCTCAATGGCAGCTCCGGTGGCAGCTCTGTAGGCGGCGGCTACGTTCTGCTCCCCCAGGCGGCCAGCTCCAGTGGCAATAATAACGGCAACGGCGGCCACATGTCGTCCGGTTCCGTGGGCAACAATTCCGGTGGCAACAACGGCGGTTCCGGAGGCGGCTCCGGTCCGGGCAATTCAATGGGCGGCACCAGCGCCGCTCCAGGACACGGCGGCGAGGTGATCGATTTCAAGCATCTGTTCGAGGAACTGTGCCCCGTGTGCGGCGACAAGGTGAGCGGTTATCACTACGGCCTGCTCACCTGTGAGTCCTGCAAGGGATTCTTCAAGCGCACCGTGCAGAACAAGAAGGTCTACACCTGCGTGGCGGAGCGATCGTGCCACATCGACAAGACGCAGCGCAAGCGGTGTCCCTACTGCCGCTTCCAGAAGTGCCTCGAGGTCGGCATGAAGTTGGAGGCTGTTCGAGCGGATCGGATGCGGGGTGGACGCAATAAATTCGGGCCCATGTACAAACGGGATCGGGCGCGAAAGCTGCAGGTGATGCGGCAGCGGCAGTTGGCGTTGCAGGCGCTGCGGAACTCCATGGGTCCGGACATCAAGCCAACACCGATCTCCTCGGGCTACCAGCAAGCATATCCAAATATGAACATTAAGCAGGAAATTCAAATACCTCAGGTATCCTCACTCACCCAATCGCCGGACTCGTCGCCCAGCCCCATTGCGATTGCGTTGGGTCAGGTGAATGCCAGCACGGGCGGAGTGATAGCCACGCCCATGAGCGCCGGCAACGGTGGCAGTGGCAGCGGCGGGGGCCTGAACGGTCCCAGTTCCTTGGGTAATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGCGGCCGGCGTCGGGGGAGGAGGCGGTGGCAATAATGCGGGCGGCGGAGGAGGTGGCGGCGGCGGTGGCGGTGGCAACGGTTCCGCCGATGGCCTGCATCGCAATGGCAACAGCAATTGCCATGAGGCTGGAATAGGATCTCTGCAGAACACGGCCGACTCGAAATCGTGCTTCGATTCCGGCACCCATCCATCGAGCACAGCCGATGCGCTTATCGAGCCATTAAGAGTCTCACCGATGATTCGTGAATTTGTGCAATCGATCGACGATCGGGAATGGCAAACGCAACTGTTTGCGCTGCTGCAGAAGCAAACCTACAACCAGGTGGAGGTGGATCTCTTCGAGCTGATGTGCAAAGTGCTCGACCAGAACTTGTTCTCGCAAGTGGACTGGGCACGCAACACCGTCTTCTTCAAGGACCTGAAGGTCGATGACCAAATGAAGCTGCTGCAGCATTCGTGGTCGGATATGCTGGTCCTGGATCACCTGCACCATCGCATCCACAATGGCCTGCCGGATGAGACGCAGCTGAATAATGGCCAGGTCTTCAATCTGCTGAGCCTCGGATTGTTGGGTGTTCCCCAGCTGGCCGATTACTTCAACGAGCTGCAGAATAAGCTGCAAGATCTGAAATTCGATATGGGCGACTATGTCTGCATGAAATTCCTAATCCTGTTGAATCCAGATGTGCGGGGTATTGTGAACCGGAAGACCGTCTCCGATGGACACGATAATGTGCAAGCAGCTATGCTGGACTACACCCTCACCTGTTATCCGTCAGTTACTGAAAAATTCCGTAGGCTAGTGAATATCCTACCAGAAATCCATGCCATGGCCGCCCGCGGCGAGGAGCACCTGTACACCAAGCACGTGGCCGGGAGTGCACCCACCCAAACCCTGCTCATGGAGATGCTGCACGCCAAGCGCAAGGTGTAG
Protein Sequence
MLLEMDQQQATYIFPTGYQDTTSSHSQQSGGGGGGGGNLLNGSSGGSSVGGGYVLLPQAASSSGNNNGNGGHMSSGSVGNNSGGNNGGSGGGSGPGNSMGGTSAAPGHGGEVIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRNSMGPDIKPTPISSGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNASTGGVIATPMSAGNGGSGSGGGLNGPSSLGNGXXXXXXXXXXXXXXXXXXXSAAGVGGGGGGNNAGGGGGGGGGGGGNGSADGLHRNGNSNCHEAGIGSLQNTADSKSCFDSGTHPSSTADALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLLSLGLLGVPQLADYFNELQNKLQDLKFDMGDYVCMKFLILLNPDVRGIVNRKTVSDGHDNVQAAMLDYTLTCYPSVTEKFRRLVNILPEIHAMAARGEEHLYTKHVAGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00581562;
90% Identity
iTF_00614935;
80% Identity
iTF_00615617;