Basic Information

Insect: Drosophila vallismaia
Gene Symbol: -
Assembly: GCA_035047325.1
Location: JAWNPU010000066.1:16444495-16450003[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0034 0.29 11.8 0.3 1 23 144 166 144 166 0.97

2 15 3.5 3e+02 2.3 5.8 1 23 172 195 172 195 0.97

3 15 3.5e-05 0.0031 18.1 2.5 1 23 374 396 374 396 0.98

4 15 2.4 2.1e+02 2.8 2.0 1 23 402 425 402 426 0.92

5 15 2.1 1.8e+02 3.0 0.2 1 23 446 469 446 469 0.92

6 15 0.001 0.087 13.5 1.9 3 23 717 737 716 737 0.92

7 15 0.04 3.5 8.4 1.4 1 23 743 766 743 766 0.98

8 15 9.6 8.3e+02 1.0 1.4 3 23 804 824 802 825 0.76

9 15 0.0021 0.18 12.5 0.4 1 23 846 869 846 869 0.97

10 15 0.0029 0.25 12.0 0.2 1 23 1064 1086 1064 1086 0.98

11 15 0.0054 0.47 11.2 5.1 1 23 1098 1120 1098 1120 0.98

12 15 7.7e-06 0.00067 20.1 0.8 2 23 1126 1148 1125 1148 0.95

13 15 0.0028 0.24 12.1 5.0 1 23 1154 1179 1154 1179 0.95

14 15 0.00025 0.022 15.4 2.5 1 23 1184 1206 1184 1206 0.97

15 15 0.072 6.2 7.7 0.3 1 14 1212 1225 1212 1235 0.72

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0034	0.29	11.8	0.3	1	23	144	166	144	166	0.97
2	15	3.5	3e+02	2.3	5.8	1	23	172	195	172	195	0.97
3	15	3.5e-05	0.0031	18.1	2.5	1	23	374	396	374	396	0.98
4	15	2.4	2.1e+02	2.8	2.0	1	23	402	425	402	426	0.92
5	15	2.1	1.8e+02	3.0	0.2	1	23	446	469	446	469	0.92
6	15	0.001	0.087	13.5	1.9	3	23	717	737	716	737	0.92
7	15	0.04	3.5	8.4	1.4	1	23	743	766	743	766	0.98
8	15	9.6	8.3e+02	1.0	1.4	3	23	804	824	802	825	0.76
9	15	0.0021	0.18	12.5	0.4	1	23	846	869	846	869	0.97
10	15	0.0029	0.25	12.0	0.2	1	23	1064	1086	1064	1086	0.98
11	15	0.0054	0.47	11.2	5.1	1	23	1098	1120	1098	1120	0.98
12	15	7.7e-06	0.00067	20.1	0.8	2	23	1126	1148	1125	1148	0.95
13	15	0.0028	0.24	12.1	5.0	1	23	1154	1179	1154	1179	0.95
14	15	0.00025	0.022	15.4	2.5	1	23	1184	1206	1184	1206	0.97
15	15	0.072	6.2	7.7	0.3	1	14	1212	1225	1212	1235	0.72

Sequence Information

Coding Sequence: ATGGCGTTAAACAAAAGGTTGAGCTCCCAAGCGGACGGAGAGGACTTAAAGTTTGCGTGTCGCTGCTGTCTGAAGATGAACACCGAGCTACTCAAGCTGGACTCTGTGACTGTGGCGCGCAGTCTGGATCCGGCGGAGGCAAAGGAAAAGATTCCCCTACTACGCTGCCTGCTCTACTGTACACGCGGCGAAAATCCGGCGGAGCTGCCGCAGTATATCTGCAACGAGTGCAGCCAGAGCCTTCAGATCGCCTACTACTTTATCCAGAATTCGATTCGTGCGCACGAGATCCTGTGTCGCAAACTGTGCCCGAGCAAAGCCTCCAGGACTGTCCAGATGACGCGGTTCAACGGTTGCCTCGGCCAGGAGCTGGAGGAACACTTGGAGGGCGACACCGACAGGACaaagtatttgaaaaaaaccATGCGCCACGAGTGCCAGGTGTGCGGAGTTATCGTCTACAATCGCCTGGAGCTGAAGCAGCACATACGCTTACATGCAGATGGCCTCGCTTACCACTGCAAAATGTGCAACTATTCAACACTGAAGCAGCGACTGTTGCACGATCATTATCGCTCAATCCACAACCAAAACGCTGCTCAGGCCGAGGAGCTTTCCAAGGTGAAACCTGAAGCCGCCAAACCGGAAGAGGAGGTCAAGGTGTGCACGCTGGAGGACATGGAGCTGCTGATACCCACAGTTCTAACGCCGGAGGATTACTCAACGGTGCCGATCGATGCGGACCAGCTGCGGGATATTGAACAGCAGCTGGCGGCCACAATGGGCGAAACAGTGCCAACGGTGGACACACTAACCTCCACATTGCCGCCAATGGAGTCCCAAAACGTGAGCATCGGCACGGAGTATCTGGTCTTGCCGGACGGATCCCTACAGCAGGTCAACGGTGGTGGCGTGGTTATTGAGTATATAGACGATAGCAAGCCTACAAATTCCAATTCCCATGCGACCCCCTCTATCAACATTAACTTGCAAAACCTTCTGGGCGGCGACGACAACGAAGGAATGGACATTGATGTCAATGAGCTGATTGTCGAGGATGTGTTGCCGCAAATTAAAGTAACGCCAAAGCCAGCGCCTCACGGATCTCCAGTGTACAAGCACAAATGCAAATTGTGCCCTAAAACATTTGCCACTTTGGCACGTCTGAAATCTCATCAGTTGACGCACAGCCATTTGCCCAAGTTTTTCTGCGATCAGTGCGATTACTACTCGTTGCGCAGTGCCGATCTCATTCAGCACTATCAGAACCAGCACCACCGATCGGAGGGGCTGGCGGATAAATCGGCGGATGGCATCAAGCAGGATGTGCGTACATATTCCTGTGATATGTGTCTGTTTGAGACGCCGACAGTCAATGAACTTCGCATCCACTATGCCCAGAGTCATACGGTTCAGCCGACGGAAGTGGAGCTGCGTCCCAGCTGGACGACTGATAATGGTAGTGCTAAGGCAGACGATGCATCTTGCACGATCAACGAAAAGCAGCCAGCTTTATTGTCAAACTCTTCCGAAACCCACGTGCCCATTAAATGTGATCCTGCAGTTGCAGACACTCAAGGCCAATTCGAGCAACTGCCGGTGGCATCAATGGCGAGCGTTGTCCAAACCGAAGCCACGCcgaatttttttgtgggcaCTTCCAATTCCATTGCGGCGCCAGTGACATCCATTGCCGAAAGCGCTGGGGGAGCTCCATGCGGCTCGTTCGAAATGTTCCCTGAAATCTCTCAAGCCAATTTGTCGATTAATGAATCTATGCCGCAAGCGCCGGCCAATATTTCCAATTCAAACATTTCCATGTTCGGCGACATGCAGGATTTTATTGACAACACCGACGTGGCTGCCATATGCACCATTCCAGCCGACGACATGCCCGTGGTCGATGGTGACGACATCGTAATTGATAATAATAACATCAGCCTGGACTTTGATGCCGAAAACTTGTTCGAAGACTtcgaagaggaggaggaggccgCCGCGGCAGAggaggatgatgatgatggcgaAAACGAAGATGAGAATGAGAACAATGATACAGCCACCGATCAAAATCTGCTGCTAACCAGTGACGACGATGACGTCGACGATTTTGATGACGAGCAGTCAAAGCATCTCCAGAAGCCTTACTGCATTTACTGCAACAAAAAGTTCACCAGTCAGTACAAATTTGAGAATCACATGTTTGTCCATCGGGGTCTGGCTCCCTACCGCTGCGAATTGTGTACCAATCTGTACAATATGAAGCGTCTTCTGATCAGGCATTACAAAACGGTGCACAAAAGAATGCCCACAAGGGACATGGTCCAGGCCAAGGGTGACAAGGTTTCGGTGGCGCGTTCTAGCCTTGAAAAGATCGAATTGAATACAAATAAGAATCCCATGCTGATGTGCGCAAAGTGTCCGTTCGAGTGCGAGTTGGATGGAGAGATGCGAAAGCATTTGAATGCCCACCACGGCATCAACGACGGAGTATCTCTGCATGCCAACGAAGTGTTTATAATACGCAAACTGCCTTTTGAGTGTCCGCGTTGCATTCGCTCGTTTGCGGCCAAGAGCACCCTGGTTCGCCATCTGCAGCGAAGCCATTTGGTGGAGACCATCATCGAAGCGCCAGCCCCACATGCAACAGCCAGTTCAGCGGCGACAACCACAACGACGACGGCCACGGCGACCACATCCGGGCCGGCCAACCACAGTCAAGATGAGGATAAGGCCGAACTCAAGATGACAATGTCGCCGACTGCTGCTGAAAGTGGCGTTGGCGATGGCAATGGGGAATGCGAGGGAACAAGCagagatgatgatgatggagcCATAGCAGGAGAAGGAACTTCTATTAAATCGGAATTAGCACTACCCAAAGAACAATACGATGTCGATGGAGCGGCAGCACATCCTGGAGCCATAGCCGTAACATCAGCCACGTCGCCCATTACAACCACTGTCTCAACCACATCAGGCACTTTCTCCACACTGTTTCCCACACCCACGCCGTTTGATTTAGATTGTGATCTGATTTCCGATGTCCCAGCCCCGCAGAACATATCCGTGTCCAACACCAATTCCAATCCCAGCGCACTTTTAAATGGCAGCGACAAGTTTCTACCCGCTTTGTCGCCAGCAGAGAAATGCCTGCCCTCCAATTCGCGGCTTCCACGCTCCCCAACATACAAGTGCAAGCTGTGCAGCGAGGCCTTCGACGAACTGGGGAAGCTGGTTAAACACGAGATGGTCCACTCGAACACGGACTCTTCTCGAGCGGGCTATCAACATAAATGCACTATTTGCAATACCAGCTACCGCAATCTAACTTTGCTAAAGTTTCACATGAAGCGGCATatgaaatgcaaaatgcagtGTAAACTTTGCCCAAAGACTTTCGCCACCAGCCAGGAGCTCGAACGTCACACGAGGGCCAAGCATATGAGGCAGACTACGTTCCGCTGCAATTTGGACAACTGTAAGAAGACGTTCGCGTACAAGCACCACATGGTGCGGCATCAGAACGCCTCCCATTTGCAGACCCGGCACGTGTGCACCATATGCGACAAGGAGCTGATGAATAGCCAGCATCTGCGGAACCACATGTCCATACACAAAGGTGGAACGTCGTACAAGTGTCCCTATTGCGATCGAACGTATTTGCGTCGGGGACGtATCGGTGCCCATGTTCTAAAagttcataaaataaaattaaacgaTGAGGAGCTGGCCGTTTTCCTTCGTGAAACTGTGAGGGTGATAAACCGCCAGGGACAGCTAGTGCGgcgaaaagaagaaaataaagaagaaatttCACCATAA
Protein Sequence: MALNKRLSSQADGEDLKFACRCCLKMNTELLKLDSVTVARSLDPAEAKEKIPLLRCLLYCTRGENPAELPQYICNECSQSLQIAYYFIQNSIRAHEILCRKLCPSKASRTVQMTRFNGCLGQELEEHLEGDTDRTKYLKKTMRHECQVCGVIVYNRLELKQHIRLHADGLAYHCKMCNYSTLKQRLLHDHYRSIHNQNAAQAEELSKVKPEAAKPEEEVKVCTLEDMELLIPTVLTPEDYSTVPIDADQLRDIEQQLAATMGETVPTVDTLTSTLPPMESQNVSIGTEYLVLPDGSLQQVNGGGVVIEYIDDSKPTNSNSHATPSININLQNLLGGDDNEGMDIDVNELIVEDVLPQIKVTPKPAPHGSPVYKHKCKLCPKTFATLARLKSHQLTHSHLPKFFCDQCDYYSLRSADLIQHYQNQHHRSEGLADKSADGIKQDVRTYSCDMCLFETPTVNELRIHYAQSHTVQPTEVELRPSWTTDNGSAKADDASCTINEKQPALLSNSSETHVPIKCDPAVADTQGQFEQLPVASMASVVQTEATPNFFVGTSNSIAAPVTSIAESAGGAPCGSFEMFPEISQANLSINESMPQAPANISNSNISMFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEDFEEEEEAAAAEEDDDDGENEDENENNDTATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVARSSLEKIELNTNKNPMLMCAKCPFECELDGEMRKHLNAHHGINDGVSLHANEVFIIRKLPFECPRCIRSFAAKSTLVRHLQRSHLVETIIEAPAPHATASSAATTTTTTATATTSGPANHSQDEDKAELKMTMSPTAAESGVGDGNGECEGTSRDDDDGAIAGEGTSIKSELALPKEQYDVDGAAAHPGAIAVTSATSPITTTVSTTSGTFSTLFPTPTPFDLDCDLISDVPAPQNISVSNTNSNPSALLNGSDKFLPALSPAEKCLPSNSRLPRSPTYKCKLCSEAFDELGKLVKHEMVHSNTDSSRAGYQHKCTICNTSYRNLTLLKFHMKRHMKCKMQCKLCPKTFATSQELERHTRAKHMRQTTFRCNLDNCKKTFAYKHHMVRHQNASHLQTRHVCTICDKELMNSQHLRNHMSIHKGGTSYKCPYCDRTYLRRGRIGAHVLKVHKIKLNDEELAVFLRETVRVINRQGQLVRRKEENKEEISP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00504202;
90% Identity: iTF_00546187; iTF_00504202;
80% Identity: -