Basic Information

Insect: Drosophila tropicalis
Gene Symbol: nfxl1
Assembly: GCA_018151085.1
Location: JAECWH010000958.1:767377-772187[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.57 5.3e+03 -2.4 0.5 15 18 92 95 91 96 0.81

2 19 2 1.8e+04 -8.1 6.4 15 19 149 153 148 153 0.82

3 19 0.066 6.1e+02 0.6 0.4 4 10 184 190 183 190 0.96

4 19 6.5e-08 0.0006 19.8 15.5 1 18 198 214 198 215 0.98

5 19 1.6 1.5e+04 -3.8 2.6 6 10 241 245 240 245 0.89

6 19 2.7e-06 0.025 14.6 15.0 1 19 251 270 251 270 0.96

7 19 0.46 4.2e+03 -2.1 1.0 5 10 294 299 294 299 0.93

8 19 6.3e-08 0.00058 19.9 12.0 1 19 305 325 305 332 0.94

9 19 1.6 1.5e+04 -3.8 0.8 6 10 349 353 348 355 0.54

10 19 5.9e-09 5.4e-05 23.1 14.2 1 18 359 376 359 377 0.97

11 19 0.7 6.4e+03 -2.7 0.4 1 5 386 390 386 395 0.73

12 19 0.0011 10 6.3 14.9 1 18 411 428 411 429 0.97

13 19 2.4e-08 0.00022 21.2 14.8 1 19 438 456 432 456 0.90

14 19 3.3e-05 0.31 11.2 7.6 9 19 501 511 499 511 0.88

15 19 0.0014 13 6.0 6.1 1 12 523 533 523 533 0.96

16 19 0.0001 0.96 9.6 7.6 1 12 600 611 600 611 0.96

17 19 0.65 6e+03 -2.5 17.6 1 19 639 656 639 656 0.93

18 19 1.7 1.6e+04 -3.9 1.6 8 13 661 666 660 666 0.74

19 19 4.6e-06 0.042 13.9 10.7 1 16 707 721 707 727 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.57	5.3e+03	-2.4	0.5	15	18	92	95	91	96	0.81
2	19	2	1.8e+04	-8.1	6.4	15	19	149	153	148	153	0.82
3	19	0.066	6.1e+02	0.6	0.4	4	10	184	190	183	190	0.96
4	19	6.5e-08	0.0006	19.8	15.5	1	18	198	214	198	215	0.98
5	19	1.6	1.5e+04	-3.8	2.6	6	10	241	245	240	245	0.89
6	19	2.7e-06	0.025	14.6	15.0	1	19	251	270	251	270	0.96
7	19	0.46	4.2e+03	-2.1	1.0	5	10	294	299	294	299	0.93
8	19	6.3e-08	0.00058	19.9	12.0	1	19	305	325	305	332	0.94
9	19	1.6	1.5e+04	-3.8	0.8	6	10	349	353	348	355	0.54
10	19	5.9e-09	5.4e-05	23.1	14.2	1	18	359	376	359	377	0.97
11	19	0.7	6.4e+03	-2.7	0.4	1	5	386	390	386	395	0.73
12	19	0.0011	10	6.3	14.9	1	18	411	428	411	429	0.97
13	19	2.4e-08	0.00022	21.2	14.8	1	19	438	456	432	456	0.90
14	19	3.3e-05	0.31	11.2	7.6	9	19	501	511	499	511	0.88
15	19	0.0014	13	6.0	6.1	1	12	523	533	523	533	0.96
16	19	0.0001	0.96	9.6	7.6	1	12	600	611	600	611	0.96
17	19	0.65	6e+03	-2.5	17.6	1	19	639	656	639	656	0.93
18	19	1.7	1.6e+04	-3.9	1.6	8	13	661	666	660	666	0.74
19	19	4.6e-06	0.042	13.9	10.7	1	16	707	721	707	727	0.92

Sequence Information

Coding Sequence: ATGGAAGAGCATAAACATGTGCAATCAAAAAACTTGGCATCTAAAAACAGACTTGAGGATACCTTTACCTATATCTCTAGTTCAGAAGATGAGGAAGAATTGGATGAAAAGCATATATTGGAACTATTGTACAAGAATTACCAACCCGTCTCGGATGCATCTCGAACCCCAACTAGCCGAACATCCGTATTCCTGGAAAATACATTGCATTCGGGAGCTGCAACATGTTTAATATGCATTGGTGGCATCAAACGCGTGGAGTCAATTTGGTCTTGTCAAACTTGTTATTGTTTTTTTCACCTAAATTGCATTCAACGCTGGGCTAATGACAGTGTCATGCAAATGAAGGTAAAAGGAGAGCAGCAGCGAAATGACAATCAGGGCTACTATAATCATCTGGGGGAGTTTGTTCCACCAAAGCGTAAAAAGTCTCTTCACTGGTGCTGCCCGCAGTGTCGTATGGAATATCAGCCTGATGAGAGGCCGACAACCTACAACTGTTTTTGTGGTAAGGAAATCAATCCTCCTGCACAACCCTTCCTAGTTCCACATTCATGTGGCGAGGTCTGCGGAAAGTTCTTAGAACCAAAGTGTGGCCACGACTGCAAACTTCTATGTCATCCGGGGCCTTGTCCGCCGTGTGCGCAGCAGTCCCAAAATACTTGCCGTTGCGGCAAATCTGCCCCGCGACCCCTGCGCTGCATTGACAGAGATTGGCAATGCCAAGAAAAGTGCGAAAAGCTTCTATCATGTGGCAAACACAAATGCAATCAAAGATGTCACCGTGCAGGAAACTGCCCAGGCTGCACCAAACAGAGTACCCAACCATGTGAGTGTGGACGAGATATGAAGATTGTCAGCTGCGCCAATAGAAAATGGAAATGCCAGAATATTTGTGGTGGCCGGTTTGTCTGTGGTCTGCATTCTTGTGATAAACTATGTCACAAAGGACCATGCGAAATGGGCGAATGTCCCTTTAATGTCCGTAGCTGTCCCTGCGGTAAAAATAGCCAATCTTTGTCATGCAGTGAAGTGGTGGATACCTGTGGCGACACTTGTCAAAAGATTTTGTCATGCGGCCAACACACATGCACGCAACGCTGTCATCGTGGACCCTGCAATTCGTGCCTAGTCACAACAAGAAAGAAGTGCCGCTGTGGTCTGCACGAGAAGGAGTTGCCATGCTCTAAAGAGTTTACGTGTGATACTAAATGCAAGCAAGTACGGGACTGCGGAAAACATGCCTGTAACAGAAAGTGCTGCGGAGATCAGTGTTTGCCCTGTGAAAAGATATGTGGCAAGCCTTTGAGTTGCAACAAACACAAATGCCAATCGGTTTGTCACCGTGGGCCTTGTTATCCATGCAGACTGGAGTCAGTAGTTAATTGCCGATGTGGCAAGACACGACGTAGTGTTCCTTGTGGCAGAGAGAGAAATACACGGAACCTATGTCTTGAGCTGTGTCGAGTTTCAGCTAAGTGTCATCATATCGTAGAACACCGTTGCCATAAGGGTGAGTGTCCGCCATGCCGCCAGAGATGTGGCCTTCTAAATGATGTCAGCGGTTGTGGCCACATTTGCAAAGCTGTATGCCACGAAGCCGTAAAAGTCAAGAATCAGAAGACATTAAATATTAAAACGCAGATTAAAAAAACATATGAATATAAATCCTTGCCACATCCGCGTTGTGAGGAGAGCGTAAATGTCAAGTGCATTGGTGGTCACGAAGTGGTAACCACATATTGCTGGAACTCTAAGCCAACATCGTGTTATCGCAAATGTGGCAGAATATTGAAATGTGGTAATCATCAATGTAATCTTACGTGCCACACGGTCGCAAATTTGGAGAACATGCAGCAACAGGTAGGCTGTATCAACTGCGAAGAGGGCTGCGTTAAACCCAGACCCAGTGGTTGTAGTCATCCCTGTCCCAAAGGCTGTCATTTACCTCCGTGCTCTCCATGCACCGTTCTGATTAAAAGTAAGTGTCATTGCGGACTCATACAAGTAATGTACAAGTGCAGCGAATTTTTTAACGAAACTGGCTCAATCCAGGAGCAACTCGAACAAAAGGAGAGATTGGGAAGCTGCGGGAATCGTTGTATTAAAAATTTTCCTTGCGGTCATCGATGTCTGGCCGTTTGTCACTCTGGGATATGCCCAGGTCCTGAGCTATGTCGTAAAAAAGTACGCATTTACTGCCCATGCAAAAGGTTAAAGCAAGAAATTGCATGTGATATTCATCGAGCTGGCCAATTGTTACTACAGTGCAACTCCCAATGTGAAGCTGATCACTCACGCGCTTTTAAAGAACTCGCACTAAAACAACACTTGGAGGATGAAAAAAACCGTATGGAGTTGGAGAAATTTCAACAAAAGTTTGGAAAGCGCAAGCACAAGGAGCGCAAAATTGCAGACATAGGGCCAAGCCAAAAAAATTTCAATTGGCAACGCGGAGCCATCTATGCTGTGTCCTTAACAGCAACATTAGGGGCGCTGGCAGTAGCCTACTATGCAGATAGGTAA
Protein Sequence: MEEHKHVQSKNLASKNRLEDTFTYISSSEDEEELDEKHILELLYKNYQPVSDASRTPTSRTSVFLENTLHSGAATCLICIGGIKRVESIWSCQTCYCFFHLNCIQRWANDSVMQMKVKGEQQRNDNQGYYNHLGEFVPPKRKKSLHWCCPQCRMEYQPDERPTTYNCFCGKEINPPAQPFLVPHSCGEVCGKFLEPKCGHDCKLLCHPGPCPPCAQQSQNTCRCGKSAPRPLRCIDRDWQCQEKCEKLLSCGKHKCNQRCHRAGNCPGCTKQSTQPCECGRDMKIVSCANRKWKCQNICGGRFVCGLHSCDKLCHKGPCEMGECPFNVRSCPCGKNSQSLSCSEVVDTCGDTCQKILSCGQHTCTQRCHRGPCNSCLVTTRKKCRCGLHEKELPCSKEFTCDTKCKQVRDCGKHACNRKCCGDQCLPCEKICGKPLSCNKHKCQSVCHRGPCYPCRLESVVNCRCGKTRRSVPCGRERNTRNLCLELCRVSAKCHHIVEHRCHKGECPPCRQRCGLLNDVSGCGHICKAVCHEAVKVKNQKTLNIKTQIKKTYEYKSLPHPRCEESVNVKCIGGHEVVTTYCWNSKPTSCYRKCGRILKCGNHQCNLTCHTVANLENMQQQVGCINCEEGCVKPRPSGCSHPCPKGCHLPPCSPCTVLIKSKCHCGLIQVMYKCSEFFNETGSIQEQLEQKERLGSCGNRCIKNFPCGHRCLAVCHSGICPGPELCRKKVRIYCPCKRLKQEIACDIHRAGQLLLQCNSQCEADHSRAFKELALKQHLEDEKNRMELEKFQQKFGKRKHKERKIADIGPSQKNFNWQRGAIYAVSLTATLGALAVAYYADR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00571590;
90% Identity: iTF_00571590; iTF_00524104; iTF_00618838;
80% Identity: -