Basic Information

Insect: Drosophila tristis
Gene Symbol: RREB1
Assembly: GCA_018150885.1
Location: JAECWT010000228.1:3175531-3185606[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.029 2 8.8 0.8 1 21 197 217 197 219 0.93

2 11 0.0002 0.014 15.6 0.2 1 23 229 251 229 251 0.98

3 11 1.7 1.1e+02 3.3 3.7 2 19 441 458 441 460 0.97

4 11 0.0068 0.46 10.8 0.1 1 23 612 634 612 634 0.97

5 11 1e-05 0.00067 19.7 0.7 1 23 644 666 644 666 0.99

6 11 0.00068 0.045 14.0 2.0 1 23 672 695 672 695 0.97

7 11 0.0024 0.16 12.2 2.0 1 23 976 999 976 999 0.95

8 11 7.1e-05 0.0047 17.1 0.3 2 23 1398 1419 1397 1419 0.97

9 11 0.12 7.9 6.9 6.3 1 23 1425 1448 1425 1448 0.97

10 11 0.0098 0.65 10.3 0.6 3 23 1652 1672 1650 1672 0.95

11 11 0.0011 0.073 13.3 4.8 1 23 1678 1700 1678 1700 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.029	2	8.8	0.8	1	21	197	217	197	219	0.93
2	11	0.0002	0.014	15.6	0.2	1	23	229	251	229	251	0.98
3	11	1.7	1.1e+02	3.3	3.7	2	19	441	458	441	460	0.97
4	11	0.0068	0.46	10.8	0.1	1	23	612	634	612	634	0.97
5	11	1e-05	0.00067	19.7	0.7	1	23	644	666	644	666	0.99
6	11	0.00068	0.045	14.0	2.0	1	23	672	695	672	695	0.97
7	11	0.0024	0.16	12.2	2.0	1	23	976	999	976	999	0.95
8	11	7.1e-05	0.0047	17.1	0.3	2	23	1398	1419	1397	1419	0.97
9	11	0.12	7.9	6.9	6.3	1	23	1425	1448	1425	1448	0.97
10	11	0.0098	0.65	10.3	0.6	3	23	1652	1672	1650	1672	0.95
11	11	0.0011	0.073	13.3	4.8	1	23	1678	1700	1678	1700	0.99

Sequence Information

Coding Sequence: ATGTTGGCAGCACAGCAACAGCAGCAGCAGCAGCCCCAGTCCACACACAGCACTGCCACAGCCACAGCCAGCGCCACCGCCGCCGCCGTAGTCACGCAGGCAGCGATGGAGCGTCAGCGGCGCGAGTCCACCACATCGGAGTCCTCGCTGGAGCATCTCGACCTCGGCCGCACACCAAAGAAGCTGAGCAGCAGCAGCGGCCCACAGCCCACATCGACGCCACACGACACGGCCCCAGCAACGGCGGTGATGTCCGCGTCGCGCAAGCGCAAGCTGCGACAGCACCAACAGCACCAGCAGCAGGATCTGCACAGCGACGACGAGGAGGAGGAGGAGCCACGTCCGCTGGAGGAGACGCTGGCTGCTGTGCAGCGGCCGCGACACAAGCAGCGACGCAACGCCAACGCCTCGGCGGCGGCCAGCGCCAGCATCGTGATGGACTACAGTGCCGGCGACGCCAGCTCGCTGCGCAAGAAGTTCCGGCTGAACCGCAGCGGCGCCGCCAACGGCGACCTCTCGGAGTCCGGTTTCGGCCTCTGCCTGTCCAGCGGCGAGTCGGGCATCGGGGCCGGCGACGAGCACATGAAGTACCTCTGCCCCATCTGCGAGGTGGTCTCGGCCACGCCCCACGAGTTCACCAACCACATCAGGTGCCACAACTACGCCAACGGCGACACCGAGAACTACACCTGCCGCATCTGCTCCAAGGTGCTCTCCTCGGCCTCGTCGCTGGACAGACACGTGCTGGTGCACACGGGCGAGCGGCACCCGGGACGTGCGGAGAGCTATGAGAGCGATGCCAGCTGCTCCACGGATGTCTCCAGTGCACACAGTCATGCCAACAGCCATGGGAGCAACAGCCACAACAACAACAACAATCCACACAAAGCGAACAACAACAACAACAACCACAACAGCCACAAGGAGATGCAGCAGCAGCAGCAGATCCAAGAGCAGATCCAGGAGCGGATCAAGCAGCGTCGCCCCAAGACCACCATCAACAACAACAACATCATCGACGAGGGCTCCCCGGCAGCGGCGGAGGATGAACGGGAGGAGCACGAGGAGCAGGACATGAAGGAGGAGCAGCCCGATGCAGACAGCGACGAGGATGTGGCCATGCCGCTGTCCATCACCAGCACCCCGGATGTGGCCACCCTGCTGGCCGGCGTCAATGCATCCTCGCGCGCTGAGTCGCGCTCCCGCTCCCCCTCGCCGGGCATGCCGCTGCTGAGCTGCCCCGCCTGCGGCGCCGCCGACTTTGACACGCTGCCCGGCCTGTGCGCCCACCTGGACGCCCGCCACTCGGACATACCCGCCAAGTGCCGCGACTGCGAGGTGATCTTCGCCAGCCACCGCCAGCTGCAGGCGCACTGCTGCCGCGGCCTGGTGGGGGTGGATCTGCCGCCGATGCTGGGTGCCAGCAGCTCGCCGCTGCACCAGGGCGAGGACGATGAGGATGAGGAGGATGCCGAGGACGGGGACGAGGCCAGGAACGAGCGCGAGGCGGAGCAGCGCGATGAGTTTTTCCAGCAGCTGTACCTCAAGGGCAAGGCAGCCGCTGCCGCAGCAGCTGCCGCCGGGGCATCCATTGGGGCATCGTCGCCGCCGTCCCCCATCAAGCACGAGCCGGCGGACAGCAAGGATCTGGCCGACATCCAGAGCATCCTGAACATGACCAGCTCCAGCTGCACCTCCAGCTTCCTGCGCAACTTCGAGCAGTCCGTGAACACGCCCTGCTCCAGCCAGTACAGCCTCGATGGGCGCGACCAGGAGGAGGAGGCCCAGGACGTCTTCACCTCCGAGTTCCGGCGCATGAAGCTGCGCGGCGAGTTCCCCTGCAAGCTGTGCACGGCCGTGTTCCCCAACCTGCGCGCCCTCAAGGGCCACAACCGGGTGCATCTCGGCTCCGTCGGCCCCTCGGGCCCCTTCCGCTGCAACATGTGCCCCTACGCCGTCTGCGACAAGGCCGCCCTCGTGCGCCACATGCGCACCCACAACGGGGACCGGCCGTACGAGTGCGCCGTCTGCAACTACGCCTTCACCACGAAGGCCAACTGCGAGCGGCACCTGCGCAACCGGCACGGCAAGACCAGTCGCGAGGACGTGAAGCGGGCCATCGTCTACCATCCGGCGGAGGATGCCAGCTGCGAGGACAGCAAGTCCCGGCTGGGGCTCGGCGACGATCTGGCCGATCTGAGCTTCCGCTCCATCTCGCCGCCACCACCGCCGCCGCCGCCACCCAGTGCCCCGATCGCCGAGGCCGGCTCACAGCTGAAGCACATGCTCCTGGGCGAGCCATCGCCGTCACCATCGACATCGCATACTCCCACAGCAGTCGCCGCTGCAGCTGCCGCTGCCGCTGCCGGGCCACCGTCCAAGATCCAGGTGAAGAGCCTCGACCAGCTGGTGGACAAGAAGAAGCCTGCCGCAGGTGGCAGCCCTGCGCTCGACTTTAGCATGGATGTGCTGGATCTCAGCAAGAAGCCAACAGCGGGAGGATCTGCAGCTGCCTCCGCTACGGCGGCATCGCCAGCCGCAGCGGTGCCAGAACTGTCAGCCGTCCTGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCAGGAGCCGCAGGAGCAGGCGATGCCGCCTCCCAGTACATGCAGCAGCTGTTCCGCAACCTCATGTTCCAGTCGCAGGCGCCGGGCTTTCCCTTGTTCGGATTCATGGCGCCGCCGCCACCACAGGGCAGTGCCGAGAAGCAGCCGCAGCTGAGTCCGCCCACGCGCATGGGCGGCCTGCCGCTGCCGATGCCGGTGGGCGTGCCCGTGCCGCCCGGCGGCCCCGTCAAGATGGTCATCAAGAACGGAGTGCTGATGCCCAAGCAGAAGCAGCGCCGCTACCGCACCGAGCGGCCCTTCGCCTGCGAGCACTGCTCCGCGCGCTTCACCCTGCGCTCGAACATGGAGCGGCACGTGAAGCAGCAGCATCCGCAGTTCTACGCCCAGCGCCAGCGCAGCGGACACCATGTGATGCGCGGCCGTGGAGCCTCCAATGCCGCGGCAGCTGTGGCCGCAGCCGCCGCCGCAGCGGCAGCCATGAGCCAGGGCGGATCCGGAGCGGGCCATGTGCACGGCCATGCCCCCATTTCGGAGCAGGTCAAGTACGCCATCCTGGCACAGCAGCTGAAGGCGCACAAGAACACGGATCTGCTGCAGCAGGCGCTGGCCCACGGCTCCAGCAGCGTGGCCGGCGGCAATCCCCTGCTGCACTTCGGCTACGGCCCCCCGCCCCAGGCGCAGGCCCACGCCCACTCGCACGGCCACGCCCACTCGCACGCGCACGCCCAGTCGTCCAGTTCTGGCGCCCATCTGCCGCATCTGGTGAACGGGCTGCACAACGGGAATGGGAATGGGAATGGGAACAGTGGGATCGGTGGGCAGGCGAGTGCCATCGATGACGACGAGCCCAAGCTGATCATTGACGAGGACGAGGATGGCGAGGGCGATGTGGAGGAGTTTGATGACGATGAGGAGGAGGAGGAGGATGAGCCCGAGGACGAGGACCCGGAGCCAGAGCCAATGGAGGAGTCGGAGCAGCCGGAGGACGAGCAGGAGCTGCCCAAGCCCCTGGAGCAGCCCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGGCCGACACCATCCTCGAGCAGGTGATCAAGGCGGGCAAGGGCAGGGCCACGCCCACAGCCACCGTTACGCCGATGAGCACGCGCACGCCGTCACCCTCGCCCAGCCCGTCGGAGGAGCCGATGCCGAGCAACGCGATGCCGGAGCCGAGTCCCCCGAATCCCACCATGAAGTCGATGATCGCCCAGGCCGAGTCGGTGGCCAAGTCGCTGAAGGAGGTGGCCAGCTCCCCGTTCAAGGACGAGTCGCAGGACCTGGTGCCGGTGGCCAAGCTGGTGGACAACGCCACCAGCAGCCAGATGAGCTTCAACAGCTACTTCCGGCCCAGCGACGTGGCCAACCACATGGAGCAGAGCGACGAGGAGGGCCTCGTCGCCTCCGGCAGCGCCAGCGAGAGCAACAACTCCGGCACGGAGGACGTGACCAGCAGCAGCTCCGGCAGCGAGCCGAAGAAGAAGTCCGCCTACAGCCTGGCCCCCAATCGCGTCTCCTGCCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCCCTGCGGCGCCACATCCTCACCCACACCGGCCAGAAGCCCTTCAAGTGCTCCCACTGCCCCCTGCTCTTCACCACGAAGAGCAACTGCGACCGCCATCTGCTGCGCAAGCACGGCAACGTCGAGTCCGCCATGTCCGTCTACGTGCCCACCGAGGACGTCAGCGAGCCGATACCCGTGCCCAAGTCCGTCGAGGAGATCGAGCTGGAGGAGCAGCGTCGCCGCCAGGAGGCGGAGCGGGAGCGCGAGCGCGAACGGGAGCTGCAGCTGGAGCGGGAGCGCGAGAAGGAGCTGGAGCGCGAGCGGGAGCTGGAGCGGGAGCGCGAAAAGGAGCGCCTGGTGCTCATCCAGAAGCTGGCGGCGCAGATGAATGCCGCTGCAGCTGCTGCCGCCGCCGCTGCCTCGGCCTCTGCCTCTGCCTCGTCCGATCCCGGCGCTGGCGGAGATCTGCCCTACAAGTGCCACCTGTGCGAGGGCTCGTTCGCCGAGCGGCTGCACTGCCTCGAGCACATCAAGCAGTCGCACGCCCACGACTTTGCCCTGCTGCTGGCCAAGGGAGCCATCGAGCCGGAGTCGACCCCGGCCCGTGGTGGCGGTGAGTCCAACCACCACCAGCAGCAGCAGCAGAGCACCCCGGGCGCCGGCTCCGACGATGAGGCGAGTGGCGGCGGTGGCCGCGGGGCCTCCGGCAAGTATCCGGACTACAGCAACCGCAAGGTGATCTGCGCCTTCTGCCTGCGCCGCTTCTGGTCCACCGAGGATCTGCGCCGCCACATGCGCACCCACTCCGGGGAGCGGCCGTTCCAGTGCGAGATCTGCCTGCGCAAGTTCACCCTCAAGCACAGCATGCTGCGCCACATGAAGAAGCACAGCGGACGCGCCCACAACGGCGACAATCCTGGCTCCGACTGCTCCGACGATGAGCAGGTCGCCACACCGCCATCCACCCCAGGTCCCCAGATGCCTTCGGCACCGGCCACACCCAACACCAACAACAACAACAGCTGCCAGAACAACAACAACAACAACAACAGCAGCAACACCAATGCCAACGCCAACGCCAATTCGAAGTTGGGTCTGCGTCTGCCCAAGCTGCACGAGCTGCTGGACAAGTCGAGTGAGTGGCGGGCCAGCCGCCTGGGCGAGCACAAGGAGAACATTGGGGAGGCGGCAACACCGTCGGTGGCCGCGTCGGTGGCCAGCTCCGATCTGATCGGCAATCTGCTGGGCATCAGCGACCAGGGCATACTCAACAAGCTGCTCTCCTCCGCCGACGAGGCGGCCAAGCTGCTGGGCGTGGACAACAAGTAG
Protein Sequence: MLAAQQQQQQQPQSTHSTATATASATAAAVVTQAAMERQRRESTTSESSLEHLDLGRTPKKLSSSSGPQPTSTPHDTAPATAVMSASRKRKLRQHQQHQQQDLHSDDEEEEEPRPLEETLAAVQRPRHKQRRNANASAAASASIVMDYSAGDASSLRKKFRLNRSGAANGDLSESGFGLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENYTCRICSKVLSSASSLDRHVLVHTGERHPGRAESYESDASCSTDVSSAHSHANSHGSNSHNNNNNPHKANNNNNNHNSHKEMQQQQQIQEQIQERIKQRRPKTTINNNNIIDEGSPAAAEDEREEHEEQDMKEEQPDADSDEDVAMPLSITSTPDVATLLAGVNASSRAESRSRSPSPGMPLLSCPACGAADFDTLPGLCAHLDARHSDIPAKCRDCEVIFASHRQLQAHCCRGLVGVDLPPMLGASSSPLHQGEDDEDEEDAEDGDEARNEREAEQRDEFFQQLYLKGKAAAAAAAAAGASIGASSPPSPIKHEPADSKDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSQYSLDGRDQEEEAQDVFTSEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGSVGPSGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREDVKRAIVYHPAEDASCEDSKSRLGLGDDLADLSFRSISPPPPPPPPPSAPIAEAGSQLKHMLLGEPSPSPSTSHTPTAVAAAAAAAAAGPPSKIQVKSLDQLVDKKKPAAGGSPALDFSMDVLDLSKKPTAGGSAAASATAASPAAAVPELSAVLEXXXXXXXXXXXXXXXXXXXAGAAGAGDAASQYMQQLFRNLMFQSQAPGFPLFGFMAPPPPQGSAEKQPQLSPPTRMGGLPLPMPVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAAAAVAAAAAAAAAMSQGGSGAGHVHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGGNPLLHFGYGPPPQAQAHAHSHGHAHSHAHAQSSSSGAHLPHLVNGLHNGNGNGNGNSGIGGQASAIDDDEPKLIIDEDEDGEGDVEEFDDDEEEEEDEPEDEDPEPEPMEESEQPEDEQELPKPLEQPSXXXXXXXXXXXXXXXXXMADTILEQVIKAGKGRATPTATVTPMSTRTPSPSPSPSEEPMPSNAMPEPSPPNPTMKSMIAQAESVAKSLKEVASSPFKDESQDLVPVAKLVDNATSSQMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSGSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAERERERERELQLEREREKELERERELEREREKERLVLIQKLAAQMNAAAAAAAAAASASASASSDPGAGGDLPYKCHLCEGSFAERLHCLEHIKQSHAHDFALLLAKGAIEPESTPARGGGESNHHQQQQQSTPGAGSDDEASGGGGRGASGKYPDYSNRKVICAFCLRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRAHNGDNPGSDCSDDEQVATPPSTPGPQMPSAPATPNTNNNNSCQNNNNNNNSSNTNANANANSKLGLRLPKLHELLDKSSEWRASRLGEHKENIGEAATPSVAASVASSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00487522; iTF_00474755;
90% Identity: -
80% Identity: -