Dtri011279.1
Basic Information
- Insect
- Drosophila tripunctata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035047385.1
- Location
- JAWNPS010000275.1:465888-468819[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-114 5.5e-110 367.4 23.6 1 299 47 336 47 337 0.94 2 2 0.026 4.8e+02 -0.1 2.9 209 241 355 386 339 410 0.59
Sequence Information
- Coding Sequence
- ATGGACACCAAcagaggcaacaacagcatcattagcaacagcaacagcagcaacagcaacaacaataacaatggaCGGCGTCGCAATAATATGGGCGCCAATGCAGAGAACCATGCCCTCGATCACATCACAAAGGAGGCGGAGGCACGTTTGGCAGCCAGACGACTGGCCCGGGTGGAGGCTCGAGAGATACGGATGCGGGAATTGGAACGTCAGCAGCGGGAACAGGAACAGAATGCGGATCGTGCCTttgatatgcaaaatataagCGGTGATCCGCACACCACACGTCTCGCCGGCTATGGCGGTGTCAGTCTTGGCCGCACAACGACATCGCGTCGCAGCAGCGAGGACTCCATCGAGGAGGATGCGGGCGGACGCAGTTTGCGGGACATTAAGCACGAACTGAAGGAGGTGGAGGAACGCTTTCGCAAGGCAATGATAACAAATGCGCAGCTGGACAATGATCGATCGTCGCAAACGTTTGAGGTGAAATTGCTCAAGGATAAAAGCGAAACAATGCAAGAATCCTTCACGCAACTGCAACGTGAGCTGAAGAATAAATTGAGGGAATGCAATGCATTGAAACGACAGTTGGATCGCACCACATTGGAATTGGGTTTGGTGCAGGGACAGCTGAACGAACGTGATGAACTGATAGCGGAGCATGGTCTGGTCATTGTGGCCGTGGAGAATAGTGATGGGAGTGATGCGAAACGGGCTTTGGTTAGTGTGGAAAACGCTCACATCTTGGCCAGCGTACAGGGCTCCATAGATGTGCGGCTACGCAAGTTCAATGAGGAGAAGCAACGTCTGCTGGGTGAGGTGCAAATGCTGAACGAACAGCTGGATGCTTATCGCAGCGAGGGACGCGCCGGACGCAGTAGTTCACTCAATGGTGGCTCCCTTGGCGGGCAGCAGAGTGATGACTATGATGCACAGCGAGAGGCCAATAAAATCGTATCCgattacaaatacaaactgCAAAAGGCTGAACAGGAAATAGCCAATCTGCAGGCGAGTCTATCGCGTTCCGAGACGCAAGTAATACGCTACAAGAGTACGGCGGATGCGGCCGAGAAAGTCGAGGCCGAATTGAAGGTGGAGCGGCGTAAGCTGCAGCGCGAAAATCGCGAAATACTGGAACGTCTCGAGGAGTCGGAAACTGCCAATAATCATCTACTTAAACGACTCGATAAGCTAAAGAATGCCAAGAGTACGATCCTAAAGGATTTATGA
- Protein Sequence
- MDTNRGNNSIISNSNSSNSNNNNNGRRRNNMGANAENHALDHITKEAEARLAARRLARVEAREIRMRELERQQREQEQNADRAFDMQNISGDPHTTRLAGYGGVSLGRTTTSRRSSEDSIEEDAGGRSLRDIKHELKEVEERFRKAMITNAQLDNDRSSQTFEVKLLKDKSETMQESFTQLQRELKNKLRECNALKRQLDRTTLELGLVQGQLNERDELIAEHGLVIVAVENSDGSDAKRALVSVENAHILASVQGSIDVRLRKFNEEKQRLLGEVQMLNEQLDAYRSEGRAGRSSSLNGGSLGGQQSDDYDAQREANKIVSDYKYKLQKAEQEIANLQASLSRSETQVIRYKSTADAAEKVEAELKVERRKLQRENREILERLEESETANNHLLKRLDKLKNAKSTILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00568970; iTF_00470863; iTF_00478716;
- 90% Identity
- -
- 80% Identity
- -