Dpar009929.1
Basic Information
- Insect
- Drosophila parthenogenetica
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035047505.1
- Location
- JAWNPM010000174.1:7199211-7200398[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-117 7.4e-113 376.9 26.8 1 299 30 319 30 320 0.97 2 2 0.06 1.2e+03 -1.3 3.3 219 250 347 371 322 393 0.50
Sequence Information
- Coding Sequence
- ATGGACACCACCAGAAGCAACGGCCGGCGGAGGAACAATATGTGTGCCAATGCTGAGGATCATGCCCTGGATCACATCACAAAGGAGGCGGAGGCCCGTTTGGCAGCTAGACGTCAGGCACGAGTCGAGGCGCGGGAGATACGAATGCGGGAACTTGAGCGGCAGCAGAAGGAACAGGAGCAGAATGCAGATCGTGCCTTTGATATGCAGAACATAAGCGGCACTGCCATCCACGATACACATCCATCGCGTCTCGTGTATGGCGGTCACTTGAATCTGACCCGTTCGACGGCGTCACGACGGAGCTCAGAGGATTCGGTCGAGGAGGAGGGCGGTCGTAGCTTGCGGGACATTAAACACGAGCTGAAGGAGGTGGAGGAAAGATTCCGCAAGGCGATGATAACAAATGCGCAGCTGGACAACGATCGATCATCCCAGACGTATGAAGTCAAACTGCTAAAGGACAAAAGCGAAACGATGCAAGAATCCTTCACGCAACTGCAGCGTGAGCTCAAGAACAAACTGCGCGATTGCAATGCTCTCAAACGTAACTTGGATCGCACCACATTGGAGCTGGGTCTGGTTCAGGGACAGCTTAATGAACGCGATACTCTAATCGCCGAGCACGGATTGGTGATTGTTGCCGTGGAGAATACCGACGGCACCGATGCTAAGCGCGCTCTGGTCAGTGTGGAGAACGCCAATATTCTGGCCAGTGTTCAGGGATCGATTGATGTCAGGCTAAAGAAGTTCACGGAGGAGAAACAGCGATTGTCGGCCGAGGTGCAAATGCTACACGAACAATTGGATGCCTATAGGAACGAGGGCAGAGCCGGTCGAAGTAGTTCAATGAACGGATCACTGGGCTACAATGATGACTACGATGCGCAGCGGGAGGCCAATAAGATCGTATCAGATTACAAATATAAACTGCAAAAGGCTGAACAGGAAATTGCCAATCTGCAGGCGAGTTTATCACGCTCCGAATCGCAGGTGATTCGCTACAAGAGCACGGCCGAGGCAGCCGAAAAGGTCGAGGCCGAGCTGAAGTTGGAGCGACGTAAATTGCAGCGAGAACATCGCGAAATTCTGGAACGTCTTGAGGAGGCGGAGACAGCTAATAATCATCTACTAAAACGACTtgataaactaaaaaatgcaaagagcACTATCCTCAAGGATTTATGA
- Protein Sequence
- MDTTRSNGRRRNNMCANAEDHALDHITKEAEARLAARRQARVEAREIRMRELERQQKEQEQNADRAFDMQNISGTAIHDTHPSRLVYGGHLNLTRSTASRRSSEDSVEEEGGRSLRDIKHELKEVEERFRKAMITNAQLDNDRSSQTYEVKLLKDKSETMQESFTQLQRELKNKLRDCNALKRNLDRTTLELGLVQGQLNERDTLIAEHGLVIVAVENTDGTDAKRALVSVENANILASVQGSIDVRLKKFTEEKQRLSAEVQMLHEQLDAYRNEGRAGRSSSMNGSLGYNDDYDAQREANKIVSDYKYKLQKAEQEIANLQASLSRSESQVIRYKSTAEAAEKVEAELKLERRKLQREHREILERLEEAETANNHLLKRLDKLKNAKSTILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00610642;
- 90% Identity
- iTF_00470863; iTF_00478716;
- 80% Identity
- -